mRNA_Ecto-sp13_S_contig17859.5431.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17859.5431.1 vs. uniprot
Match: A0A6H5JM44_9PHAE (GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM44_9PHAE) HSP 1 Score: 410 bits (1055), Expect = 1.650e-140 Identity = 199/217 (91.71%), Postives = 205/217 (94.47%), Query Frame = 1
Query: 10 FSTLQRFLSKAGDEVEILTTDDKEDRPESHLDFPITTTSGFRFILYNQACARLNVVV------HRKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQLKDNGIERVDVWRKGIDVERFNPKFACKEMRSRLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLER 642
F + +FLSKAGDEVEILTTDDK++RPESHLDFPITTTSGFRFILYNQACA LNVV+ RKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQL+ NGIERVDVWRKGIDVERFNPKFACKEMRSRLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLER
Sbjct: 56 FREMLKFLSKAGDEVEILTTDDKDERPESHLDFPITTTSGFRFILYNQACATLNVVIMLTFDWERKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQLEANGIERVDVWRKGIDVERFNPKFACKEMRSRLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLER 272
BLAST of mRNA_Ecto-sp13_S_contig17859.5431.1 vs. uniprot
Match: A0A7S2XXM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXM0_9STRA) HSP 1 Score: 253 bits (646), Expect = 1.450e-79 Identity = 117/211 (55.45%), Postives = 155/211 (73.46%), Query Frame = 1
Query: 10 FSTLQRFLSKAGDEVEILTTDDKEDRPESHLDFPITTTSGFRFILYNQACARLNVVVHRKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQLKDNGIERVDVWRKGIDVERFNPKFACKEMRSRLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLER 642
F + +FL KAGDEV I+TTDD +D P HL + I T GFRF LYNQ ++ + KG MI ++KPD+IH TSPGF+ +L YAR FR+P+L SYHTHLP+Y R YL ++PG +WA+LR HN+ADLTL TSPQM+++L ++G++RV+VWRKGID E F+PK+ + MR +L+ GHPEDPL+IYVGRLG EK+L +K VL +
Sbjct: 108 FKEMLKFLKKAGDEVSIVTTDDVKDAPTKHLGYEIQNTKGFRFPLYNQIVLTFDLEL--KGMQMIRKLKPDVIHCTSPGFITFAALIYARMFRIPLLMSYHTHLPIYARDYLWFLPGSVHWAWAMLRLVHNRADLTLVTSPQMKEELTEHGVQRVEVWRKGIDTEVFDPKYKSQTMREKLSAGHPEDPLMIYVGRLGTEKKLELLKDVLHK 316
BLAST of mRNA_Ecto-sp13_S_contig17859.5431.1 vs. uniprot
Match: A0A6T5MMG1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MMG1_HETAK) HSP 1 Score: 257 bits (656), Expect = 2.020e-79 Identity = 124/211 (58.77%), Postives = 153/211 (72.51%), Query Frame = 1
Query: 10 FSTLQRFLSKAGDEVEILTTDDKEDRPESHLDFPITTTSGFRFILYNQACARLNVVVHRKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQLKDNGIERVDVWRKGIDVERFNPKFACKEMRSRLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLER 642
F ++L+KAGD VEILTTDD D PES L FPI T GFRF LYNQ L+ KG M+ R +PD++HVT PGF+ L +L YAR F++P++FSYHTHLP Y YLGW+PGIE +W LR+ N+ADLTL TS M+ QL ++G+ R++VWRKGID + FNP F EMR+RLTDGHPEDPL+IYVGRLGAEK L+ IK VL +
Sbjct: 108 FKEALKYLAKAGDNVEILTTDDVPDAPESFLGFPINYTKGFRFPLYNQIV--LSADHEGKGKEMLGRRRPDLLHVTCPGFITLAALVYARMFKLPLVFSYHTHLPHYAIQYLGWVPGIEDAAWTALRFVLNRADLTLVTSGPMRDQLAEHGVRRLEVWRKGIDTDVFNPAFKSAEMRARLTDGHPEDPLLIYVGRLGAEKNLKLIKDVLAK 316
BLAST of mRNA_Ecto-sp13_S_contig17859.5431.1 vs. uniprot
Match: A0A7S2I8U8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I8U8_9STRA) HSP 1 Score: 254 bits (649), Expect = 2.100e-79 Identity = 120/214 (56.07%), Postives = 164/214 (76.64%), Query Frame = 1
Query: 10 FSTLQRFLSKAGDEVEILTTD---DKEDRPESHLDFPITTTSGFRFILYNQACARLNVVVHRKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQLKDNGIERVDVWRKGIDVERFNPKFACKEMRSRLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLER 642
F + ++L+KAGD+VE+LT D D ++ P+ +PI T GF F LYN +++ KG +++R++PD+IHVTSPGF+V ++FYAR R+P+L SYHTHLP YG+ YLG+IPGIE +W +LRYAH++ADLTL TSPQM+ +L NGI RVDVWRKGID RF+PKF +EMR++++DG+P+D L++YVGRLGAEKRL+DI+ VLER
Sbjct: 115 FKYMLQYLAKAGDKVEVLTVDSQTDPKELPKESFGYPIEHTMGFTFPLYNSISLTVDLP-ELKGAKILERLRPDLIHVTSPGFIVYAAIFYARVMRIPLLMSYHTHLPSYGKNYLGFIPGIEEFAWWLLRYAHSRADLTLVTSPQMRDELVANGIPRVDVWRKGIDTVRFDPKFKDEEMRNKMSDGNPDDFLMVYVGRLGAEKRLKDIRAVLER 327
BLAST of mRNA_Ecto-sp13_S_contig17859.5431.1 vs. uniprot
Match: A0A7S4JZT8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JZT8_9STRA) HSP 1 Score: 254 bits (650), Expect = 2.150e-79 Identity = 124/214 (57.94%), Postives = 162/214 (75.70%), Query Frame = 1
Query: 10 FSTLQRFLSKAGDEVEILTTDDK---EDRPESHLDFPITTTSGFRFILYNQACARLNVVVHRKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQLKDNGIERVDVWRKGIDVERFNPKFACKEMRSRLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLER 642
F+ + R+LSKAGD+VEILTTD+K E+ P+ + I T GF F LYN +++ KG +I+++KPD+IHVTSPGFL+ ++FYAR RVP++ SYHTHLP YG+ YLG+IPGIE +W +LR+AH +ADLTL TSPQM+ +L NGI RVDVWRKGID RF+PKF ++ R +TDG+P+D L++YVGRLGAEKRL+DIK VLER
Sbjct: 89 FNEMLRYLSKAGDKVEILTTDNKTPAEELPKERFGYEIHHTQGFTFPLYNHITLTVDLP-EIKGIKLIEKLKPDLIHVTSPGFLLYAAVFYARVMRVPLVMSYHTHLPSYGKNYLGFIPGIEEFAWFLLRWAHTRADLTLVTSPQMRDELVANGIPRVDVWRKGIDTVRFDPKFKSQKWRETMTDGNPDDFLMVYVGRLGAEKRLKDIKAVLER 301
BLAST of mRNA_Ecto-sp13_S_contig17859.5431.1 vs. uniprot
Match: K0SPG6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SPG6_THAOC) HSP 1 Score: 254 bits (648), Expect = 3.050e-79 Identity = 122/215 (56.74%), Postives = 160/215 (74.42%), Query Frame = 1
Query: 10 FSTLQRFLSKAGDEVEILTTD---DKEDRPESHLDFPITTTSGFRFILYNQACARLNVVVHRKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQLKDNGIERVDVWRKGIDVERFNPKFACKEMRS-RLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLER 642
F + R+LSKAGD V+ILT D K++ PE + I T GF F LY+ ++ KG M++R +PD+IHVTSPGF+V LFYAR R+P+L SYHTHLPLYGR Y GW PG+E SWA+LR+AH +ADLTL TSPQM++++++NGI RV+VWRKGID RF+PKF +E RS R++DG+P+D L++YVGRLGAEKRL+DIK +LE+
Sbjct: 82 FKEMLRYLSKAGDNVDILTVDAKTPKDELPEESFGYKIEHTQGFVFPLYDHISLTFDLP-EMKGAKMMERRRPDLIHVTSPGFMVFAGLFYARVMRIPLLLSYHTHLPLYGRNYCGWFPGVEEFSWALLRFAHTRADLTLVTSPQMKEEMEENGIPRVEVWRKGIDTVRFDPKFRSEEFRSERMSDGNPDDFLMVYVGRLGAEKRLKDIKPMLEQ 295
BLAST of mRNA_Ecto-sp13_S_contig17859.5431.1 vs. uniprot
Match: A0A835ZJ95_9STRA (Glycosyl transferase, group 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ95_9STRA) HSP 1 Score: 251 bits (642), Expect = 1.630e-78 Identity = 115/211 (54.50%), Postives = 152/211 (72.04%), Query Frame = 1
Query: 10 FSTLQRFLSKAGDEVEILTTDDKEDRPESHLDFPITTTSGFRFILYNQACARLNVVVHRKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQLKDNGIERVDVWRKGIDVERFNPKFACKEMRSRLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLER 642
F + +++ KAGD I+TTDD D P S L +PI T GFR +Y + + GW++I+++KPD++HVTSPGF+ +L YAR FRVP++FSYHTHLP+Y +TY W P IE +++ +LR+ HN+ADLTL TSPQM+ L+ G+ERVDVWRKGID ERFNP F EMR+RL G PE PL+IYVGRLG+EKRLR+I V++R
Sbjct: 50 FKEMLKYIHKAGDSAAIVTTDDSPDAPSSFLGYPIANTKGFRCPVYKHIVLTFDTEL--VGWSVIEKLKPDVLHVTSPGFINFAALLYARIFRVPLVFSYHTHLPVYAKTYWEWFPRIEELAYFLLRFVHNRADLTLVTSPQMKDVLESQGVERVDVWRKGIDTERFNPSFKSPEMRARLAGGRPEAPLLIYVGRLGSEKRLREIATVMDR 258
BLAST of mRNA_Ecto-sp13_S_contig17859.5431.1 vs. uniprot
Match: B8CGB9_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CGB9_THAPS) HSP 1 Score: 248 bits (633), Expect = 2.160e-78 Identity = 118/214 (55.14%), Postives = 159/214 (74.30%), Query Frame = 1
Query: 10 FSTLQRFLSKAGDEVEILTTDDK---EDRPESHLDFPITTTSGFRFILYNQACARLNVVVHRKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQLKDNGIERVDVWRKGIDVERFNPKFACKEMRSRLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLER 642
F + R+LSKAGD V+ILT D K E+ P+ + I T GF F LYN +++ KG M++R +PD+IHVTSPGF++ LFYAR R+P+L SYHTHLPLYGR YLG+IPGIE SW ++R+AH++ADLTL TSPQM+++++ NG+ RV+VWRKGID RF+PK+ +EMR ++TDG+ D L++YVGRLG EKRL+DI+ VLE+
Sbjct: 17 FKEMLRYLSKAGDNVDILTVDSKTPKEELPKEAFGYSIEHTQGFVFPLYNHISLTVDLP-EMKGAKMMERRRPDLIHVTSPGFMLYAGLFYARVMRIPLLLSYHTHLPLYGRNYLGFIPGIEEFSWGLIRFAHSRADLTLVTSPQMKEEMEANGVPRVEVWRKGIDTVRFHPKYKSEEMRRKMTDGNEGDFLMVYVGRLGGEKRLKDIRPVLEQ 229
BLAST of mRNA_Ecto-sp13_S_contig17859.5431.1 vs. uniprot
Match: A0A7S2YAZ2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YAZ2_9STRA) HSP 1 Score: 252 bits (644), Expect = 3.540e-78 Identity = 117/214 (54.67%), Postives = 162/214 (75.70%), Query Frame = 1
Query: 10 FSTLQRFLSKAGDEVEILTTDDKE---DRPESHLDFPITTTSGFRFILYNQACARLNVVVHRKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQLKDNGIERVDVWRKGIDVERFNPKFACKEMRSRLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLER 642
F + +F+ KAGD+V+ILT D K + P+ +L +P+ T GF F LY Q +++ KG +++R++PD+IHVTSPGFLV ++FYAR VP++ SYHTHLP+Y YLG+IPG +SW++LR+ H++ADLTL TSPQM+ +L +NGI RVDVWRKGID ERF+PKF +EMR+++TDGHP+D L++YVGRLGAEKRL+DIK +L +
Sbjct: 106 FKEMLKFMKKAGDDVDILTVDAKTPAAELPDEYLGYPVRHTQGFTFPLYRQISLTIDLP-EMKGARILERLRPDLIHVTSPGFLVYTAIFYARVMCVPLVMSYHTHLPVYADNYLGFIPGASKISWSLLRWVHSRADLTLVTSPQMRDELLENGIPRVDVWRKGIDTERFDPKFRSQEMRAKMTDGHPDDFLMVYVGRLGAEKRLKDIKAMLAK 318
BLAST of mRNA_Ecto-sp13_S_contig17859.5431.1 vs. uniprot
Match: A0A7S3Z520_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z520_9EUKA) HSP 1 Score: 251 bits (642), Expect = 3.570e-78 Identity = 112/210 (53.33%), Postives = 158/210 (75.24%), Query Frame = 1
Query: 10 FSTLQRFLSKAGDEVEILTTDDKEDRPESHLDFPITTTSGFRFILYNQACARLNVVVHRKGWAMIDRMKPDIIHVTSPGFLVLPSLFYARFFRVPMLFSYHTHLPLYGRTYLGWIPGIEAMSWAVLRYAHNKADLTLCTSPQMQQQLKDNGIERVDVWRKGIDVERFNPKFACKEMRSRLTDGHPEDPLIIYVGRLGAEKRLRDIKGVLE 639
F + ++L KAGD+V ++TTD ++ P S L FPI TTSGF F LY +++ RKGWA++ + +PD++H T+PGF+ L S+ YA+ FR+P++ SYHTHLP+Y R YLG+IPGI ++W L N+ADL L TSPQ++++L+DNG+ VDVWRKG+DV+ FNP + ++MR+ LTDG+PEDPL+IYVGRLGAEK+L+ +K VLE
Sbjct: 128 FKEMLKYLDKAGDDVTVMTTDSNKNPPSSFLSFPIETTSGFVFPLYPDITVSADLL-QRKGWAILKKSRPDVLHATAPGFMCLTSIAYAKLFRLPLVISYHTHLPIYARDYLGFIPGIVELAWFALNVVLNQADLVLTTSPQLKKELEDNGVNNVDVWRKGVDVDVFNPSYRTEQMRNTLTDGNPEDPLMIYVGRLGAEKKLKALKSVLE 336 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17859.5431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17859.5431.1 >prot_Ecto-sp13_S_contig17859.5431.1 ID=prot_Ecto-sp13_S_contig17859.5431.1|Name=mRNA_Ecto-sp13_S_contig17859.5431.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp MFCFSTLQRFLSKAGDEVEILTTDDKEDRPESHLDFPITTTSGFRFILYNback to top mRNA from alignment at Ecto-sp13_S_contig17859:1035..2834+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17859.5431.1 ID=mRNA_Ecto-sp13_S_contig17859.5431.1|Name=mRNA_Ecto-sp13_S_contig17859.5431.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1800bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17859:1035..2834+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17859:1035..2834+ >mRNA_Ecto-sp13_S_contig17859.5431.1 ID=mRNA_Ecto-sp13_S_contig17859.5431.1|Name=mRNA_Ecto-sp13_S_contig17859.5431.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=645bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17859:1035..2834+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |