prot_Ecto-sp13_S_contig1784.5422.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1784.5422.1
Unique Nameprot_Ecto-sp13_S_contig1784.5422.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length113
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1784.5422.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 9.940e-11
Identity = 90/103 (87.38%), Postives = 91/103 (88.35%), Query Frame = 0 
Query:   11 SGGPADGTRAARPEGGDGVDAVAATAVAVAAVDGKQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGRSWLLPPQVWAAIDSG 113
            SGGPADGTR A PEG DGVDAVAATAVAVAAVDG +EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      VG RSWLLPPQVWAAID G
Sbjct:  938 SGGPADGTRTAGPEGCDGVDAVAATAVAVAAVDGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----VGDRSWLLPPQVWAAIDRG 1035
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BLAST of mRNA_Ecto-sp13_S_contig1784.5422.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.830e-10
Identity = 41/43 (95.35%), Postives = 41/43 (95.35%), Query Frame = 0 
Query:    5 GGGDGDSGGPADGTRAARPEGGDGVDAVAATAVAVAAVDGKQE 47
            GGGDGDSGGPADGTRAARPEG D VDAVAATAVAVAAVDGKQE
Sbjct:  826 GGGDGDSGGPADGTRAARPEGDDVVDAVAATAVAVAAVDGKQE 868
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1784.5422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KEQ7_9PHAE9.940e-1187.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN71_ECTSI1.830e-1095.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1784contigEcto-sp13_S_contig1784:358..696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1784.5422.1mRNA_Ecto-sp13_S_contig1784.5422.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1784 358..697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1784.5422.1 ID=prot_Ecto-sp13_S_contig1784.5422.1|Name=mRNA_Ecto-sp13_S_contig1784.5422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp
GGGEGGGDGDSGGPADGTRAARPEGGDGVDAVAATAVAVAAVDGKQEGGD
DGGDDEVTAGGGDERERSSPGGEDPARPAAATACRAAAAAAAAAVGGRSW
LLPPQVWAAIDSG
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