mRNA_Ecto-sp13_S_contig17833.5419.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17833.5419.1
Unique NamemRNA_Ecto-sp13_S_contig17833.5419.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17833.5419.1 vs. uniprot
Match: A0A6H5KID1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KID1_9PHAE)

HSP 1 Score: 712 bits (1839), Expect = 4.950e-252
Identity = 353/394 (89.59%), Postives = 372/394 (94.42%), Query Frame = 1
Query:    1 HGSDLILPAETNAQLRAVLEGNQKLVARTDAEHGHSDQVERIFEYLAGVASTHKDSATINIPEVLAALAYSRSPPGVAFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEIFAKELEAFKLGASCERGFKAVEVSSLGVKANRQLSVQGAEQKMPKLLDRDVTVMYRTFVGDAQLFNASIATVIEHISSAFEVVVVVVEADVGLFESIVQPFRIAAPFPIRVIGEPELMDGRLQQKYSKLRADLYTEGGYILHLDSDAIVFQDVSFAHMFHLGKPILPFRRYEKNRRLEGWTKTMCWESGTFSAIGEDIIHEFGVLNTALYPRSMYPAAREFIEQHHGMSFVDFMASRRGSCTHLDHPTERAQHERALIFSDSNFIGAYLW 1182
            +GSDLILPAETNAQLRAVLEGNQKLVARTDA+HGHSD+VERI+EYLAGVASTHKDSATINIPEVLAALAYSRSPPGV FVNMNEWSHQNLFSEASIWDVPMVKPRFGCS DRSLGNQGYDMGEIFAKELEA KLGASCE+GFKAVEVSSL VK NRQLSVQGAEQK+PK LD DVTVMYRTFVGDA+LFNASIATVIEH+SSAFEVVVVVVEADVGLFESIVQPFRI APFPIRVIGEPELMDG+LQQKYSKLRADLYTEG YILHLDSDA+VFQDVSFAHMFHLGKP+LPFRRYEKNRRLE WT+ MCWESGT SAIGED+IH+FGV N  LYPRSMYPAAREFIEQH+GM FVDFMASRRGSC + D  T+R Q ER+L+FSDSNFIGAYLW
Sbjct:  308 YGSDLILPAETNAQLRAVLEGNQKLVARTDAKHGHSDRVERIYEYLAGVASTHKDSATINIPEVLAALAYSRSPPGVTFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSLDRSLGNQGYDMGEIFAKELEALKLGASCEQGFKAVEVSSLDVKVNRQLSVQGAEQKVPKSLDYDVTVMYRTFVGDAKLFNASIATVIEHVSSAFEVVVVVVEADVGLFESIVQPFRIVAPFPIRVIGEPELMDGKLQQKYSKLRADLYTEGDYILHLDSDAVVFQDVSFAHMFHLGKPVLPFRRYEKNRRLEEWTEAMCWESGTSSAIGEDVIHDFGVSNIHLYPRSMYPAAREFIEQHNGMPFVDFMASRRGSCMNPDTETDRTQDERSLMFSDSNFIGAYLW 701          
BLAST of mRNA_Ecto-sp13_S_contig17833.5419.1 vs. uniprot
Match: D7FKL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL9_ECTSI)

HSP 1 Score: 715 bits (1845), Expect = 7.640e-251
Identity = 357/394 (90.61%), Postives = 371/394 (94.16%), Query Frame = 1
Query:    1 HGSDLILPAETNAQLRAVLEGNQKLVARTDAEHGHSDQVERIFEYLAGVASTHKDSATINIPEVLAALAYSRSPPGVAFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEIFAKELEAFKLGASCERGFKAVEVSSLGVKANRQLSVQGAEQKMPKLLDRDVTVMYRTFVGDAQLFNASIATVIEHISSAFEVVVVVVEADVGLFESIVQPFRIAAPFPIRVIGEPELMDGRLQQKYSKLRADLYTEGGYILHLDSDAIVFQDVSFAHMFHLGKPILPFRRYEKNRRLEGWTKTMCWESGTFSAIGEDIIHEFGVLNTALYPRSMYPAAREFIEQHHGMSFVDFMASRRGSCTHLDHPTERAQHERALIFSDSNFIGAYLW 1182
            HGSDLILPAETNAQLRAVLEGNQKLVARTDA+HGHSD+VERI+EYLA VASTHKDSA INIPEVLAALAYSRSPPGV FVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEI AKELEAFKLGASCERGFKAVEVSSL VKANRQLSVQ AEQK+PK LD DVTVMYRTFVGDA+LFNASIATVIEH+SSAFEVVVVV EADVG FESIVQPFRIAAPFPIRVIGEPELMDG+LQQKYSKLRADLYTEG YILHLDSDA+VFQD+SFAHMFHLGKP+LPFRRYE NRRLEGWT+TMCWESG  SAIGED IH+FGVLNT LYPRSMYPAAREFIEQHHGM FVDFMASRRGSC H +  TER Q ERAL+FSDSNFIGAYLW
Sbjct:  546 HGSDLILPAETNAQLRAVLEGNQKLVARTDAKHGHSDRVERIYEYLADVASTHKDSAIINIPEVLAALAYSRSPPGVTFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEILAKELEAFKLGASCERGFKAVEVSSLSVKANRQLSVQRAEQKVPKFLDYDVTVMYRTFVGDAKLFNASIATVIEHVSSAFEVVVVVAEADVGFFESIVQPFRIAAPFPIRVIGEPELMDGKLQQKYSKLRADLYTEGDYILHLDSDAVVFQDLSFAHMFHLGKPVLPFRRYE-NRRLEGWTETMCWESGISSAIGEDRIHDFGVLNTHLYPRSMYPAAREFIEQHHGMPFVDFMASRRGSCMHPNTETERTQDERALMFSDSNFIGAYLW 938          
BLAST of mRNA_Ecto-sp13_S_contig17833.5419.1 vs. uniprot
Match: D7FRS3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRS3_ECTSI)

HSP 1 Score: 546 bits (1406), Expect = 8.950e-185
Identity = 271/395 (68.61%), Postives = 317/395 (80.25%), Query Frame = 1
Query:    1 HGSDLILPAETNAQLRAVLEGNQKLVARTDAEHGHSD-QVERIFEYLAGVASTHKDSATINIPEVLAALAYSRSPPGVAFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEIFAKELEAFKLGASCERGFKAVEVSSLGVKANRQLSVQGAEQKMPKLLDRDVTVMYRTFVGDAQLFNASIATVIEHISSAFEVVVVVVEADVGLFESIVQPFRIAAPFPIRVIGEPELMDGRLQQKYSKLRADLYTEGGYILHLDSDAIVFQDVSFAHMFHLGKPILPFRRYEKNRRLEGWTKTMCWESGTFSAIGEDIIHEFGVLNTALYPRSMYPAAREFIEQHHGMSFVDFMASRRGSCTHLDHPTERAQHERALIFSDSNFIGAYLW 1182
            HGSDLILPAETNAQLRAVL  NQ+LVA+T+AE G +  Q ER++EYLA VA  H+ SA+I +PEVLAALAYSRSP GV FVN+ EWSH++LFSE SIWD+PMVKPRFGCSFD SL   GYD+G + AKELE FKLGASCERGFK+V+ S L +KA+R+L  +G EQ  P L D  + VMYRT   DA++F+ SIATVIEH+S AFEVVVVVVEADV LFESIVQP R A  FPIRVIGEPELMDG +QQ YSKLRADLYTEG Y+LHLDSDA+VF+DV+ AH+FH G P+ PFRRY +   LEGW  T+CW++GT  A+GED+ HEF + N  +YPRSMYPAAREFIEQ HGMSFVDF+A+RRGSC H +   E    ERA++FS  NFIGAYLW
Sbjct:  458 HGSDLILPAETNAQLRAVLGANQRLVAQTNAEDGDTGRQTERVYEYLADVAKMHRGSASIYVPEVLAALAYSRSPRGVTFVNIREWSHEHLFSEDSIWDIPMVKPRFGCSFDTSLTRDGYDVGGMIAKELEGFKLGASCERGFKSVDRSKLDLKADRELGDEG-EQGTPTLQDYHIAVMYRTCARDAKIFSTSIATVIEHLSGAFEVVVVVVEADVALFESIVQPLRTAVTFPIRVIGEPELMDGNVQQAYSKLRADLYTEGEYVLHLDSDAVVFEDVTPAHVFHDGMPVQPFRRYREEETLEGWATTLCWQNGTSFAVGEDVAHEFSIFNAHVYPRSMYPAAREFIEQRHGMSFVDFLATRRGSCMHPNTMAEWTADERAMMFSGFNFIGAYLW 851          
BLAST of mRNA_Ecto-sp13_S_contig17833.5419.1 vs. uniprot
Match: A0A6H5L0V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V3_9PHAE)

HSP 1 Score: 488 bits (1256), Expect = 4.730e-162
Identity = 239/395 (60.51%), Postives = 294/395 (74.43%), Query Frame = 1
Query:    1 HGSDLILPAETNAQLRAVLEGNQKLVARTDAE-HGHSDQVERIFEYLAGVASTHKDSATINIPEVLAALAYSRSPPGVAFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEIFAKELEAFKLGASCERGFKAVEVSSLGVKANRQLSVQGAEQKMPKLLDRDVTVMYRTFVGDAQLFNASIATVIEHISSAFEVVVVVVEADVGLFESIVQPFRIAAPFPIRVIGEPELMDGRLQQKYSKLRADLYTEGGYILHLDSDAIVFQDVSFAHMFHLGKPILPFRRYEKNRRLEGWTKTMCWESGTFSAIGEDIIHEFGVLNTALYPRSMYPAAREFIEQHHGMSFVDFMASRRGSCTHLDHPTERAQHERALIFSDSNFIGAYLW 1182
            HGSDLILPAETN QLRA+L    +   R +A  HG    VE ++ YLA VA  H++S +I +PEVLAALAY + P  V FVN+  WS +NLFS  SIWD+PMVKPRFGCSFD +L   GY M +  A ELEAFK GA CE GFK+V+ S L VK + +   +GA   + KL   +++VMYRTF GDA+LFN SIATVIE   SA EVV VVVEADV LFE IV+P R  APFPIRV+ EP+LMDG +QQKYSKLRADLYT+G YILH+DSD ++F+D+++ H+FHL KP+LPFRRY     +EG T  MCW++GT  AIGED++HEF + NT +YPRSMYPAAR FIEQHHGM+FVDFM++RRGSC H ++  +    ER L+FSD N++GAYLW
Sbjct:  445 HGSDLILPAETNGQLRALLGTKTRQGRRLEAGLHGAELDVEDLYAYLASVADLHRESTSIYVPEVLAALAYLQMPGEVHFVNIRAWSRENLFSVPSIWDIPMVKPRFGCSFDTALSLMGYRMDDFIANELEAFKWGAKCELGFKSVKASDLEVKVDWEFGAEGANVPVRKLAGCNISVMYRTFSGDARLFNMSIATVIERFPSALEVVAVVVEADVALFEGIVKPLRATAPFPIRVVAEPQLMDGNIQQKYSKLRADLYTKGDYILHMDSDVVMFEDLTYRHIFHLRKPVLPFRRYRNETGVEGLTTIMCWQNGTSFAIGEDVVHEFSIFNTHVYPRSMYPAARTFIEQHHGMAFVDFMSTRRGSCLHPNNMAKLTMDERRLMFSDFNYMGAYLW 839          
BLAST of mRNA_Ecto-sp13_S_contig17833.5419.1 vs. uniprot
Match: A0A6H5KI77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI77_9PHAE)

HSP 1 Score: 395 bits (1014), Expect = 2.870e-123
Identity = 220/441 (49.89%), Postives = 273/441 (61.90%), Query Frame = 1
Query:    1 HGSDLILPAETNAQLRAVLEGNQKL----VARTDAEHGHS-DQVERIFEYLAGVASTHKDSATINIPEVLAALAYSRSPPGVAFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEIFAKELEAFKLGASCERGFKAVEVSSLGVKANRQLSVQGAEQKMPKLLDRDVTVMYRTFVGDAQLFNASIATVIEHISSAFEVVVVVVEADVGLFESIVQPFRIAAPFPIRVIGEPELMDGRLQQKYSK-------------------------------------LRADLYTEGGYILHLDSDAIVFQDVSFAHMFHLGKPILPFRRYEKNRRLEGWTKTMCWESGTFSAIGEDIIH------EFGVLNTALYPRSMYPAAREFIEQHHGMSFVDFMASRRGSCTHLDHPTERAQHERALIFSDSNFIGAYL 1179
            +G+DLILPAETN QLRAVL    KL    V +   +H  S  ++  +FEYLA VA +H+ SATI IP             GV F++M+ WS +NLFS+ASIWD+P++KPRFGC+FD SL  +GYDM  + AKELEAFK GASCE GF++VE+S LGVKA+ +  V+G  Q MP L D +VTV+Y+T      LF  SIATVIEH  SAFEVVVVVV+ADV LFE IV PFR  APFPIRV+GEPELMDG +QQ YSK                                     LRADL+  G Y+LHLDSDA+VF+DV++AHMFHLGKP+LPFRRY +N   E    +    S     I  D +       ++     +   R  YPAAR FIE+HHG+SF +F+ +RR SC + D        ER L+FS  NF+GAYL
Sbjct:  446 YGTDLILPAETNEQLRAVLHTKAKLNELVVVQAQGKHRRSRKKLGFMFEYLASVAHSHRSSATIYIPXXXXXXXXXXXXXGVTFLDMHHWSRKNLFSDASIWDIPLIKPRFGCAFDTSLSLKGYDMASVMAKELEAFKFGASCELGFESVEISELGVKADWEFGVKGTNQSMPSLHDFNVTVLYQTVAAHEHLFKISIATVIEHFPSAFEVVVVVVDADVALFEGIVNPFRATAPFPIRVVGEPELMDGMVQQTYSKSTWGMAYSRSKLTLRQALNTGLTLAPVSPTASSDRTQLRADLFANGEYVLHLDSDAVVFEDVTYAHMFHLGKPVLPFRRYGRNGGGEERDVSQVIYSMRELLIRFDGLKVREPATDWEKKCASEKLRRRYPAARRFIEEHHGLSFAEFIGTRRASCAYPDETARLTADERILMFSFFNFVGAYL 886          
BLAST of mRNA_Ecto-sp13_S_contig17833.5419.1 vs. uniprot
Match: A0A6H5KL81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL81_9PHAE)

HSP 1 Score: 370 bits (949), Expect = 1.490e-122
Identity = 188/303 (62.05%), Postives = 226/303 (74.59%), Query Frame = 1
Query:    1 HGSDLILPAETNAQLRAVLEGNQKL----VARTDAEHGHS-DQVERIFEYLAGVASTHKDSATINIPEVLAALAYSRSPPGVAFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEIFAKELEAFKLGASCERGFKAVEVSSLGVKANRQLSVQGAEQKMPKLLDRDVTVMYRTFVGDAQLFNASIATVIEHISSAFEVVVVVVEADVGLFESIVQPFRIAAPFPIRVIGEPELMDGRLQQKYSKLRADLYTEGGYILHLDSDAIVFQDVSFAHMFHLGKPILPFRRYEKN 894
            +G+DLILPAETN QLRAVL    KL    V +   +H  S  ++  IFEYL  VA +H+ SATI IPEV           GV F++M+ WS +NLFS+ASIWD+P+++PRFGC+FD SL  +GYDM  + AKELEAFK GASCE GF++VE+S LGVKA+ +  V+G  Q MP L D +VTV+Y+T      LF  SIATVIEH  SAFEVVVVVV+ADV LFE IV PFR  APFPIRV+GEPELMDG +QQ YSKLRADLY  G Y+LHLDSDA+VF+DV++AHMFHLGKP+LPFRRY KN
Sbjct:   97 YGTDLILPAETNEQLRAVLHTKAKLNELVVVQAQGKHRRSRKKLGFIFEYLTTVAHSHRGSATIYIPEVXXXXXXXXXXSGVTFLDMHHWSRKNLFSDASIWDIPLIQPRFGCAFDTSLSLKGYDMASVMAKELEAFKFGASCELGFESVEISELGVKADWEFGVKGTNQSMPSLHDFNVTVLYQTVAAHEPLFKISIATVIEHFPSAFEVVVVVVDADVALFEGIVNPFRATAPFPIRVVGEPELMDGMVQQTYSKLRADLYANGEYVLHLDSDAVVFEDVTYAHMFHLGKPVLPFRRYGKN 399          
BLAST of mRNA_Ecto-sp13_S_contig17833.5419.1 vs. uniprot
Match: D7FWG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG7_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 3.870e-115
Identity = 185/417 (44.36%), Postives = 263/417 (63.07%), Query Frame = 1
Query:    1 HGSDLILPAETNAQLRAVL-----------EGNQKLVARTDAEH-GHSDQVER--IFEYLAGVASTHKDSATINIPEVLAALAYSRSPPGVAFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEIFAKELEAFKLGASCERGFKAVEVSSLGVKANRQLSVQGAE----------QKMPKLLDRDVTVMYRTFVGDAQLFNASIATVIEHISSAFEVVVVVVEADVGLFESIVQPFRIAAPFPIRVIGEPELMDGRLQQKYSKLRADLYTEGGYILHLDSDAIVFQDVSFAHMFHLGKPILPFRRYEKNRRLEGWTKTMCWESGTFSAIGEDIIHEFGVLNTALYPRSMYPAAREFIEQHHGMSFVDFMASRRGSCTHLDHPTERAQHERALIFSDSNFIGAYL 1179
            +G+DLILPA  NA+LR VL            G+   + + +A   G  +Q E   + +Y+   AS H+    + IPE+LA L+Y+R+  GV+F N  +W+H ++F E S+WD+P+VKP F C+ D +L  QG D+ E     +++F+ GASCE GF+ +    L  K + +     +           ++MP L D  ++VM+RTF GDA LFN ++ TV  +   A EVVVVV E+D  LFE I++P +  APFPIRV+ EP++MDG +QQKYSKLRADLY EG +ILHLDSD ++F+ +++ H+FH GKP+LPFRRY +   + G   + CW  GT  AIGED++HEF + NT +YPR MYPA R+FI + HG+ F +FMASRRG C  +    +    E+ L+ SD N +GAYL
Sbjct:  113 YGTDLILPAGMNAELRKVLLSASSTLADDAVGSPLSLKKQEAPPTGDEEQQELDLLRDYVLATASIHQLQKNVFIPELLAGLSYARNTEGVSFHNPAQWTHDHIFKEKSVWDIPLVKPHFSCALDINLSLQGLDVAEQIGNLVDSFRRGASCELGFEKMHKKHLNTKPHWEFGPLTSRDPTENERRKLERMPSLKDYHISVMFRTFFGDAVLFNVALPTVARYFPDAKEVVVVVEESDGELFEEIIKPHQNTAPFPIRVVTEPDIMDGHIQQKYSKLRADLYCEGDFILHLDSDVVLFEPLTYDHIFHWGKPVLPFRRY-REEIITGQQLSACWRKGTSFAIGEDVVHEFSIFNTHVYPRKMYPAIRDFIAERHGIPFKEFMASRRGKCMSVKTLKKWTLEEQTLLLSDFNLMGAYL 528          
BLAST of mRNA_Ecto-sp13_S_contig17833.5419.1 vs. uniprot
Match: A0A6H5K340_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K340_9PHAE)

HSP 1 Score: 304 bits (778), Expect = 9.800e-97
Identity = 165/322 (51.24%), Postives = 208/322 (64.60%), Query Frame = 1
Query:    1 HGSDLILPAETNAQLRAVLEGNQKLVARTDAE-HGHSDQVERIFEYLAGVASTHKDSATINIPEVLAALAYSRS------------PP---GVAFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEIFAKELEAFKLGASCERGFKAVEVSSLGVKANRQLSVQGAEQKMPKLLDRDVTVMYRTFVGDAQLFNASIATVIEHISSAFEVVVVVVEADVGLFESIVQPFRIAAPFPIRVIGEPELMDGRLQQKYSK----LRADLYTEGGYILHLDSDAIVFQDVSFAHMFHLGKPILPFRRYEKNRRLE 906
            HG DLILPAETN QLRA+L    +   R +A  HG   +VE ++ YLA VA  H++S +I +PE++  +                 PP   G AFVN+  WS +NLFS  SIWD+P+VKPRFGCSFD +L   GY +G+  A ELEAFK G                 K + +   +GA   +P+L   +V+VMYRTF GDA+LFN SIATVIE   SA EVV VVVEADV LFE IV+P R  APFPIRV+GEP+LMDG +QQKYSK    L ADLYT+G YILH+DSD ++F+D+++ H+FHL KP+LPFRRY     +E
Sbjct:  113 HGCDLILPAETNGQLRALLGTKTRQGRRLEAGLHGAELEVEDLYAYLASVADRHRESTSIYVPELVTPIPLHSVVHLVTGARGLGVPPNARGGAFVNIRAWSRENLFSVPSIWDIPLVKPRFGCSFDTALSLMGYRVGDFIANELEAFKRGGK--------------FKVDWEFGAEGANVPVPELAGCNVSVMYRTFSGDARLFNMSIATVIERFPSALEVVAVVVEADVALFEGIVKPLRATAPFPIRVVGEPQLMDGNIQQKYSKVILPLTADLYTKGDYILHMDSDVVMFEDLTYRHIFHLRKPVLPFRRYRNEAGVE 420          
BLAST of mRNA_Ecto-sp13_S_contig17833.5419.1 vs. uniprot
Match: A0A6H5L138_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L138_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 1.070e-89
Identity = 148/269 (55.02%), Postives = 192/269 (71.38%), Query Frame = 1
Query:    1 HGSDLILPAETNAQLRAVLEGNQKLVARTDAEHGHS--DQVERIFEYLAGVASTHKDSATINIPEVLAALAYSRSPPGVAFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEIFAKELEAFKLGASCERGFKAVEVSSLGVKANRQLSVQGAEQKMPKLLDRDVTVMYRTFVGDAQLFNASIATVIEHISSAFEVVVVVVEADVGLFESIVQPFRIAAPFPIRVIGEPELMDGRLQQKYSKLRADLYTEGGYILHL 801
            +GSDLILPA+ N QLRAVL    +L A+TDA    S  ++ +RI+ ++A VA  H+  A+I +PEVLAALAYS  P GV F+N+ EW   NLFS  SIW++P+VKPRFGC+FD SL  QGY MG+  AKELEAFKLGASCE G++ +  S L V  + +   +GA   +P L D +++VMYRTF GDA LFN S+A++I+   SA EVVVVVVE+D  LFESIV+PFR   P PI V+ EPELMDG +QQKYSK+R  + T+   ++H+
Sbjct:  264 YGSDLILPADINGQLRAVLGAKARLGAQTDAAPPTSAKEETDRIYAHVALVADLHRGYASIYVPEVLAALAYSSRPKGVDFINIREWHRDNLFSAPSIWEIPLVKPRFGCTFDASLDLQGYRMGDTIAKELEAFKLGASCELGYRKIAKSGLEVNTHWEFGPEGANTPLPNLRDYNISVMYRTFSGDAMLFNMSLASLIDRFPSAMEVVVVVVESDKALFESIVEPFRAVGPLPIHVVAEPELMDGHVQQKYSKVRIHVRTDAVVMVHV 532          
BLAST of mRNA_Ecto-sp13_S_contig17833.5419.1 vs. uniprot
Match: D7FZD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD5_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 4.730e-58
Identity = 140/418 (33.49%), Postives = 193/418 (46.17%), Query Frame = 1
Query:    1 HGSDLILPAETNAQLRAVLEGNQKLVA--------------RTDAEHGHSDQVERIFEYLAGVASTHKDSATINIPEVLAALAYSRSPPGVAFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEIFAKELEAFKLGASCERGFKAVEVSSLGVKANRQ----LSVQGAE------QKMPKLLDRDVTVMYRTFVGDAQLFNASIATVIEHISSAFEVVVVVVEADVGLFESIVQPFRIAAPFPIRVIGEPELMDGRLQQKYSKLRADLYTEGGYILHLDSDAIVFQDVSFAHMFHLGKPILPFRRYEKNRRLEGWTKTMCWESGTFSAIGEDIIHEFGVLNTALYPRSMYPAAREFIEQHHGMSFVDFMASRRGSCTHLDHPTERAQHERALIFSDSNFIGAYLW 1182
            +G+DLILPA+TNA+LR VL      +A                  E     +   + +Y+   AS H+    + +PE                     W+H + F E SIWD+P+VKP F C+ D     QG D+ E   K +++F+ GA CERGF  +    L  K N +    +S    E      ++MP L   +++VM+RTFVGDA LFN ++ TV  +   A E+VVVV E+D  LFE I++P +  APF IRV+ EP +MDG +QQKYSK+                           +    G   LP R          W KT+   S + +                     MYPA R F+EQ HGM F +FMASRRG C  +         E+ L+ SD N +GAYLW
Sbjct:  113 YGTDLILPADTNAELRKVLLSASSPLADGAVRSPLPLKNQEAPPTEDNEEKEQTLLRDYVVATASIHQLHTRVYVPE---------------------WTHHHFFEEKSIWDIPLVKPHFSCALDIKPSLQGLDVAEKIRKWVDSFRHGARCERGFVKMHKKHLNTKPNWEFGPLMSPDPTENERTKLERMPSLKGYNISVMFRTFVGDAVLFNVALPTVSRYFPDAKEIVVVVEESDGKLFEEIIKPHQKTAPFAIRVVTEPNIMDGHIQQKYSKVN--------------------------NCPRAGGRGLPSR----------WGKTLFTSSASST--------------------HMYPAIRGFMEQRHGMPFEEFMASRRGKCMSVKTLATWTLEEQTLLLSDFNLMGAYLW 453          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17833.5419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KID1_9PHAE4.950e-25289.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL9_ECTSI7.640e-25190.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRS3_ECTSI8.950e-18568.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L0V3_9PHAE4.730e-16260.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI77_9PHAE2.870e-12349.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL81_9PHAE1.490e-12262.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWG7_ECTSI3.870e-11544.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K340_9PHAE9.800e-9751.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L138_9PHAE1.070e-8955.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZD5_ECTSI4.730e-5833.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17833contigEcto-sp13_S_contig17833:513..3602 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score90.1
Seed ortholog evalue2.5e-15
Seed eggNOG ortholog2880.D7FI39
Model size1185
Hectar predicted targeting categoryother localisation
Exons5
EggNOG OGs2D0G2@1,2SE3H@2759
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-09_000710.1
Cds size1185
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462923.8825545-CDS-Ecto-sp13_S_contig17833:512..6841681462923.8825545-CDS-Ecto-sp13_S_contig17833:512..684Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17833 513..684 -
1681462923.8949113-CDS-Ecto-sp13_S_contig17833:1098..12041681462923.8949113-CDS-Ecto-sp13_S_contig17833:1098..1204Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17833 1099..1204 -
1681462923.9029393-CDS-Ecto-sp13_S_contig17833:1660..18111681462923.9029393-CDS-Ecto-sp13_S_contig17833:1660..1811Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17833 1661..1811 -
1681462923.911168-CDS-Ecto-sp13_S_contig17833:2485..30521681462923.911168-CDS-Ecto-sp13_S_contig17833:2485..3052Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17833 2486..3052 -
1681462923.9209354-CDS-Ecto-sp13_S_contig17833:3413..36021681462923.9209354-CDS-Ecto-sp13_S_contig17833:3413..3602Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17833 3414..3602 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17833.5419.1prot_Ecto-sp13_S_contig17833.5419.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17833 513..3602 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17833.5419.1

>prot_Ecto-sp13_S_contig17833.5419.1 ID=prot_Ecto-sp13_S_contig17833.5419.1|Name=mRNA_Ecto-sp13_S_contig17833.5419.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=395bp
HGSDLILPAETNAQLRAVLEGNQKLVARTDAEHGHSDQVERIFEYLAGVA
STHKDSATINIPEVLAALAYSRSPPGVAFVNMNEWSHQNLFSEASIWDVP
MVKPRFGCSFDRSLGNQGYDMGEIFAKELEAFKLGASCERGFKAVEVSSL
GVKANRQLSVQGAEQKMPKLLDRDVTVMYRTFVGDAQLFNASIATVIEHI
SSAFEVVVVVVEADVGLFESIVQPFRIAAPFPIRVIGEPELMDGRLQQKY
SKLRADLYTEGGYILHLDSDAIVFQDVSFAHMFHLGKPILPFRRYEKNRR
LEGWTKTMCWESGTFSAIGEDIIHEFGVLNTALYPRSMYPAAREFIEQHH
GMSFVDFMASRRGSCTHLDHPTERAQHERALIFSDSNFIGAYLW*
back to top

mRNA from alignment at Ecto-sp13_S_contig17833:513..3602-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17833.5419.1 ID=mRNA_Ecto-sp13_S_contig17833.5419.1|Name=mRNA_Ecto-sp13_S_contig17833.5419.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3090bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17833:513..3602- (Ectocarpus species13 EcNAP12_S_4_19m)
CATGGCAGTGATCTCATCCTCCCAGCGGAAACCAACGCACAGCTCCGAGC TGTGTTGGAAGGCAATCAGAAGCTGGTGGCACGCACAGACGCTGAGCATG GCCACTCCGACCAGGTGGAAAGGATATTCGAGTACTTGGCCGGCGTGGCG AGCACCCACAAGGACTCCGCCACCATAAACATTCCGGAGGTAGGTGCGAT TGGCATTTGGTGCACGCCATGTAATGTCCTATCCATGGTTTACGCACTAC ACGCATTTTCTTGTAGTCATCTCTATAGGCGCCACTAGTGATGATAGAAT CTTGTTTCATCAGCATGCGAATGTTCACGCTAAAAATCGAGGCAGGCCTG CGTTTGCCACTCATAAAGTTTCAGACATGAGAAAGACGACGCAACCTGAA CGTAACCACGCATGGCTCTCGTGAACACCCAGCAGCCTGCCGTCGTAGCA CGTGCGTGCGAGTAGAGTTTGGTGGTGATCGCTCCGTCAGCCAATAACCG TGAGCGCGAAATTCTGCACGTACGATGTCCCTGGTTTTCCCTTGTCACAG GTGCTTGCTGCCTTGGCCTATTCCCGCAGTCCACCTGGTGTGGCGTTTGT CAACATGAACGAATGGAGTCACCAAAATCTTTTCTCAGAGGCTTCGATTT GGGACGTCCCGATGGTGAAGCCTCGGTTCGGCTGTTCCTTCGATAGATCT CTGGGAAACCAAGGGTACGACATGGGAGAGATATTCGCTAAAGAGCTCGA AGCTTTCAAGTTGGGGGCATCGTGTGAGCGAGGCTTTAAAGCAGTTGAGG TGTCGAGCTTGGGCGTCAAGGCCAACCGGCAGCTCAGCGTCCAAGGAGCA GAACAGAAGATGCCGAAGTTGCTCGACCGCGACGTTACGGTTATGTACCG AACGTTCGTCGGAGATGCACAGCTCTTCAACGCTTCGATCGCCACTGTGA TCGAGCACATTTCAAGTGCCTTTGAGGTGGTTGTCGTTGTCGTGGAAGCC GACGTCGGGCTTTTCGAGAGCATCGTCCAACCGTTTCGGATCGCCGCACC GTTTCCCATTCGTGTCATCGGAGAGCCGGAGCTAATGGACGGTAGACTTC AGCAAAAGTACTCGAAGGTGAGAGAAACGTATGTAACGGTTTGGCGGTGT AATAATTATCTGCAGCCTACATGAAAGCGATTTACACGCTCTGAGAGAAA CGTGTGTGTGTGTGTGTTTAGTATTCGCATGGACCGCGCTCACCGGCCGA CCAATGAAAAGACGTCAGTCTTGTAGTGCGGTTGAAAACACAAAACACTT CTATCTGCCATAAACTGGGACCCCGTGAGGGGGCAGCATGGAGGAGGCTA AACTATCCTTCGGATCAAAGACAGAAATAGCAGCAGCGGAAGAAACCTAA ACGCGTCTACCAAGGCTAGTACCTTGTACTCCAGTTCGTTTAGGAGTACT GTGTGTGTGCGTCTTGTCTGTCTGGCCGTGCACGCACGCCACTCACGGTC GTGTAAGCAGCGATATCTTTTTCGTGTTCATCAGTTGCCCATGGTTCTGT CTCGAACCTCTCGTCGAAAATTATTTTCCCAACATTAATCTCCCCCATTT AAGAGAAAACTCACTTCGTACTGGTTGGTATGTATACTCTGGTGGCAATG ACCGAAGCAATAATGTAAACGTGGAAAACACGTTGTTGAATCTCGTTATT TCATCTCCTACCGACTTGTAACTTTCACAAATGTCAACCGACTTGAATTT GAATTTCCGTACATCGACTCTGCCTCTCGACCACACTGCAGCTACGGGCT GACTTGTACACGGAAGGAGGCTACATCTTGCACCTGGATTCGGACGCGAT CGTGTTCCAGGATGTGTCGTTCGCGCACATGTTTCATCTTGGCAAGCCCA TCTTGCCGTTCCGACGGTACGAGAAGAATCGTCGATTGGAAGGTAAAGCA CGCGAGACACGCAACCGCACGAGCGTTCTGCTGGGGGCTGCCACGGTGCC CGCACTCCGTTTTTCCAAACTAGATGTACTTGCAAACTTTCGAGACCATA TCTGTGTCGTCTCCTCCGCTTGAGGTCCAAGTTGTTGTCCGGCGTTCGAA TGAAAGCAAACCACCAATGCTTGCAGACCAACGAGGAAAATAGGCCACCG ACATTGGACAACGAAAAATCTTGGTTCGAATTTTCGTTTCCACCTCGGCC GGATATCAACATACAAGCAATAATATACATTCTCATCGTCGTTGTTTAGT TGTTGCCGCCCACCTTTCTCATGAAATGCGAGACTGAATATTGAAAATGC GTACCATATTCAGAATGCACCCCACTTTGTACACTCCGCGTCATTTTCTC GAGTTTTCAAATATCGAGCAACTGCTGCAAAACCTTCGCATTGACTAGGG TGGACAAAGACCATGTGCTGGGAGAGCGGCACATTTTCCGCCATCGGGGA GGACATCATCCACGAGTTCGGCGTCTTGAACACCGCCTTGTACCCACGAT CCATGTGAGGCGAAATCGCATCGGGCACGAAGCAGCACATCAATGTCGTG AACTGCTAGGTAGCATCAGTATTATTTTGTGCAACCTGAGCCACTTAACC TTCGAATGACCATTACCTCGAAACGTTCCCCGGCAACAAACGGAAACATC ATCCAACACCTTGCGTAGGCGTGGTAGAGACCTCCAGAAAACTCCAGGCG CTCTAAGATCATAATGACGGCCTCTCCACTTGTGTTAAATGACAACAAAC CATGCTGATGACTCCATTTGAAATCAGATGTTTTGGTTCCAATGTTCGCT CAATACACGTAGGTTTTGTGGTGTCGCTGCAGGCTCGCTTAACGCATGTC TGAAGGTGTAAACAACCTGATGAACTCACCAAAATTGGTGCCCTTCATCA ACTGGAATTTTGTCTCAGGTACCCAGCGGCTCGGGAGTTCATCGAGCAGC ACCACGGGATGTCCTTCGTCGACTTCATGGCGAGTCGACGCGGGTCTTGC ACGCACCTTGACCACCCAACCGAGAGGGCACAGCACGAGAGAGCTTTGAT ATTTTCTGACTCCAACTTCATCGGAGCATATTTGTGGTAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17833:513..3602-

>mRNA_Ecto-sp13_S_contig17833.5419.1 ID=mRNA_Ecto-sp13_S_contig17833.5419.1|Name=mRNA_Ecto-sp13_S_contig17833.5419.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1185bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17833:513..3602- (Ectocarpus species13 EcNAP12_S_4_19m)
CATGGCAGTGATCTCATCCTCCCAGCGGAAACCAACGCACAGCTCCGAGC
TGTGTTGGAAGGCAATCAGAAGCTGGTGGCACGCACAGACGCTGAGCATG
GCCACTCCGACCAGGTGGAAAGGATATTCGAGTACTTGGCCGGCGTGGCG
AGCACCCACAAGGACTCCGCCACCATAAACATTCCGGAGGTGCTTGCTGC
CTTGGCCTATTCCCGCAGTCCACCTGGTGTGGCGTTTGTCAACATGAACG
AATGGAGTCACCAAAATCTTTTCTCAGAGGCTTCGATTTGGGACGTCCCG
ATGGTGAAGCCTCGGTTCGGCTGTTCCTTCGATAGATCTCTGGGAAACCA
AGGGTACGACATGGGAGAGATATTCGCTAAAGAGCTCGAAGCTTTCAAGT
TGGGGGCATCGTGTGAGCGAGGCTTTAAAGCAGTTGAGGTGTCGAGCTTG
GGCGTCAAGGCCAACCGGCAGCTCAGCGTCCAAGGAGCAGAACAGAAGAT
GCCGAAGTTGCTCGACCGCGACGTTACGGTTATGTACCGAACGTTCGTCG
GAGATGCACAGCTCTTCAACGCTTCGATCGCCACTGTGATCGAGCACATT
TCAAGTGCCTTTGAGGTGGTTGTCGTTGTCGTGGAAGCCGACGTCGGGCT
TTTCGAGAGCATCGTCCAACCGTTTCGGATCGCCGCACCGTTTCCCATTC
GTGTCATCGGAGAGCCGGAGCTAATGGACGGTAGACTTCAGCAAAAGTAC
TCGAAGCTACGGGCTGACTTGTACACGGAAGGAGGCTACATCTTGCACCT
GGATTCGGACGCGATCGTGTTCCAGGATGTGTCGTTCGCGCACATGTTTC
ATCTTGGCAAGCCCATCTTGCCGTTCCGACGGTACGAGAAGAATCGTCGA
TTGGAAGGGTGGACAAAGACCATGTGCTGGGAGAGCGGCACATTTTCCGC
CATCGGGGAGGACATCATCCACGAGTTCGGCGTCTTGAACACCGCCTTGT
ACCCACGATCCATGTACCCAGCGGCTCGGGAGTTCATCGAGCAGCACCAC
GGGATGTCCTTCGTCGACTTCATGGCGAGTCGACGCGGGTCTTGCACGCA
CCTTGACCACCCAACCGAGAGGGCACAGCACGAGAGAGCTTTGATATTTT
CTGACTCCAACTTCATCGGAGCATATTTGTGGTAA
back to top