prot_Ecto-sp13_S_contig17827.5418.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17827.5418.1
Unique Nameprot_Ecto-sp13_S_contig17827.5418.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
BLAST of mRNA_Ecto-sp13_S_contig17827.5418.1 vs. uniprot
Match: A0A6H5JXU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU8_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 5.610e-51
Identity = 74/80 (92.50%), Postives = 78/80 (97.50%), Query Frame = 0
Query:    1 MSSWYTPERYGDWPGSSPPERNTDLRDILLWQHVFLGGLGMKTHVHVAVVEAGLRGCDKTFMMDVVFGTPKKEGDPLPII 80
            MSSWYTP+RYGDWPGSSPPERNTDLRD+LLWQHVFL GLGMKTHVHVAVVEAGLRGCD+T MMDVVFGTPKKEGDPLPI+
Sbjct:    1 MSSWYTPDRYGDWPGSSPPERNTDLRDLLLWQHVFLAGLGMKTHVHVAVVEAGLRGCDETCMMDVVFGTPKKEGDPLPIL 80          
BLAST of mRNA_Ecto-sp13_S_contig17827.5418.1 vs. uniprot
Match: D7G025_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G025_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.000e-44
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    1 MSSWYTPERYGDWPGSSPPERNTDLRDILLWQHVFLGGLGMKTHVHVAVVEAGLRGCDKTFMMDVVFGTPKKEGDPLPII 80
            MSSWYTPERY DWPGSSPPERNT +R+ LLWQHVFLGGLGMKTHVHVAVV+AGLRGCD TFMMDVVFGT KK G PLPI+
Sbjct:    1 MSSWYTPERYADWPGSSPPERNTAMREALLWQHVFLGGLGMKTHVHVAVVQAGLRGCDTTFMMDVVFGTAKK-GKPLPIL 79          
BLAST of mRNA_Ecto-sp13_S_contig17827.5418.1 vs. uniprot
Match: A0A6H5L242_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L242_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 5.430e-19
Identity = 42/72 (58.33%), Postives = 46/72 (63.89%), Query Frame = 0
Query:    1 MSSWYTPERYGDWPGSSPPERNTDLRDILLWQHVFLGGLGMKTHVHVAVVEAGLRGCDKTFMMDVVFGTPKK 72
            MSSWYTPERY D PGSS  E NT +R+ LLWQHVFLGGLG                C  TFM+D+VFGT KK
Sbjct:    1 MSSWYTPERYADGPGSSSSEYNTAIREALLWQHVFLGGLG----------------CGTTFMVDIVFGTAKK 56          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17827.5418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JXU8_9PHAE5.610e-5192.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G025_ECTSI1.000e-4486.25Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5L242_9PHAE5.430e-1958.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17827contigEcto-sp13_S_contig17827:3025..3267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17827.5418.1mRNA_Ecto-sp13_S_contig17827.5418.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17827 2205..3327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17827.5418.1 ID=prot_Ecto-sp13_S_contig17827.5418.1|Name=mRNA_Ecto-sp13_S_contig17827.5418.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
MSSWYTPERYGDWPGSSPPERNTDLRDILLWQHVFLGGLGMKTHVHVAVV
EAGLRGCDKTFMMDVVFGTPKKEGDPLPII*
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