mRNA_Ecto-sp13_S_contig1782.5413.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1782.5413.1
Unique NamemRNA_Ecto-sp13_S_contig1782.5413.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1782.5413.1 vs. uniprot
Match: D7FJK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK3_ECTSI)

HSP 1 Score: 1084 bits (2804), Expect = 0.000e+0
Identity = 559/566 (98.76%), Postives = 561/566 (99.12%), Query Frame = 3
Query:   21 MAMNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDADHEPMQHLKAVYFIRPTKGNIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDALQLALPRPPAAAKTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAVRGPGLFGQDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGSSGGKSQEVIVFIVGGVTHEEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELNLSFGPASQERGLGAFR 1718
            MAMNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDADHEPMQHLKAVYFIRPTK NIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPD LQLALPRPPAAAK LLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNA RGPGLFGQDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVG SGGKSQEVIVF+VGGVT+EEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELNLSFGPASQERGLGAFR
Sbjct:    1 MAMNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDADHEPMQHLKAVYFIRPTKENIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAAAKKLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAARGPGLFGQDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGPSGGKSQEVIVFMVGGVTYEEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELNLSFGPASQERGLGAFR 566          
BLAST of mRNA_Ecto-sp13_S_contig1782.5413.1 vs. uniprot
Match: A0A835YSG2_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG2_9STRA)

HSP 1 Score: 695 bits (1793), Expect = 3.330e-245
Identity = 365/566 (64.49%), Postives = 450/566 (79.51%), Query Frame = 3
Query:   27 MNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDADHEPMQHLKAVYFIRPTKGNIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAAD-EHEVVRQVHEYYAEFCAVNEDFFSANCPDALQLALPRPPAAAKTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGN--LRAVKSRLLDSGLTPEKVDLLDALLQYSGNAVRGPGLFGQDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGSSG--GKSQEVIVFIVGGVTHEEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELNLSFGPASQERGLG 1709
            MNV +AV+ YVD+IVSD ++ GMK LLLD+ TTQ+V+MVYSQSQ++EKEVYLVE + A  + M HLKA  FI+PT  ++  LC E+S PRF EYHVFF ++   +LLQQLA+AD EHEVVRQV EYYA+F A+NEDFF+AN         P  P+ +    +RN +A+LS+LL++K+KP+ IRYA SS  AR++A + S+QI AD IFDFRRQ GP+LL+LDR+DDPVTPLLSQWTYQAMVHELLGL DNR VL+GAPGVRK+LEEVVLSCTQDDFFAKNR++NFGDLG AVK LMDEYQ+ ++LNENI +IEDMQAFLER+PAF+SQSLNVSKHVAVLSELARLVD   LLDVSQ EQELAC+DD   H R L+EK+ S RI+  DKLRLAMLYALRYED  N  +R++K +L D G+ P+K  LLDAL+ + G A RG GL+GQ NLMS +GK IT++LQGVENVY+QHVP +MT +EAALKGKLKD  YP++  +   G+ QE+IV+IVGGVT+EEA K+AELNA+ P+ +VVLGGS V NS++FLE+L      + Q   +G
Sbjct:    1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRG-----PSQPSGSAPF-TRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPLSSSMQPMEMG 560          
BLAST of mRNA_Ecto-sp13_S_contig1782.5413.1 vs. uniprot
Match: A0A7S3M2G5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2G5_9STRA)

HSP 1 Score: 640 bits (1650), Expect = 1.920e-223
Identity = 321/561 (57.22%), Postives = 429/561 (76.47%), Query Frame = 3
Query:   18 NMAMNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDADHEPMQHLKAVYFIRPTKGNIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDALQLALPRPPAA-AKTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQ-IFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAVRGPGLFGQDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYP--AVGSSGGKSQ--EVIVFIVGGVTHEEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELNLSFG 1682
            N   +V +++RFYVDK+VSDP I GMK LLLD+ TT++V+MVYSQ+QILEKEVYLVE++  +HE M HLKA  +I+PT+ N + L  E+  P+F EYH+FF +I P ++L +L   DEH+++ QVHEYY ++ A+NE+FF     ++L L+ P   +  A  +  RN + VLSVLL++K+ PS IRY GSS  AR LA DIS  I+ +  +FDFRRQ+GP+LLILDRRDDPVTPLL+QWTYQAMVHELLGLN+NRVVL+G PG+ K+LEEVVLS TQD FFA NR +NFGDLG AVK+L++EYQ+  + NENI+SIEDMQAF+ERYP FRS+S+NVSKHVAV+SEL+RL DV  LLD+S+ EQE++CA+DH LH +EL+ ++ + ++K+ DKLRLA+LY LRYE    ++ +K+ L + GLT +++ LLDALL Y+G+A R  GLF   ++M+K+ K  T T+ G ENVY QH PL+++ +    KGK+KDSV+P  A GS+   ++  EVIVFI+GG T+EEA KVAE N + P+  V+LGGS VHNSTSFL+E+  +FG
Sbjct:    4 NAKKDVIASIRFYVDKVVSDPSIGGMKALLLDSATTRIVSMVYSQTQILEKEVYLVEQLGKNHEGMNHLKAALYIQPTEANYELLVRELQAPKFKEYHIFFSNIVPGDMLTRLGRLDEHDLIMQVHEYYGDYLAINEEFFHLGIENSLVLSSPYSRSLEAAAIYERNVNGVLSVLLSMKRSPSIIRYQGSSELARRLASDISGNIEKESGLFDFRRQEGPLLLILDRRDDPVTPLLTQWTYQAMVHELLGLNNNRVVLRGVPGIAKELEEVVLSPTQDAFFATNRHANFGDLGAAVKSLLEEYQRYAKKNENISSIEDMQAFMERYPDFRSKSINVSKHVAVISELSRLTDVCQLLDISELEQEISCANDHNLHKQELVTRIRNGKVKSADKLRLALLYLLRYESYNEVKEIKNLLAEKGLTGQQLSLLDALLAYAGDAKRAAGLFNSGSIMAKMAKTFTNTVHGAENVYTQHQPLLVSTLNELAKGKIKDSVFPPLAAGSAAAAARPSEVIVFIIGGATYEEATKVAEFNNANPTMKVLLGGSCVHNSTSFLKEIGSAFG 564          
BLAST of mRNA_Ecto-sp13_S_contig1782.5413.1 vs. uniprot
Match: F0XW02_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW02_AURAN)

HSP 1 Score: 600 bits (1548), Expect = 5.160e-208
Identity = 321/562 (57.12%), Postives = 416/562 (74.02%), Query Frame = 3
Query:   27 MNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDA--DHEPMQHLKAVYFIRPTKGNIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDALQLALPRPPAAAKTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVR-KDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDM--GNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAVRGPGLFGQD-NLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGSS----GGKSQEVIVFIVGGVTHEEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELNLSFG 1682
            MNV +AVR YVDKIV DP   GMKVLLLD  TT+ VAMVYSQ++IL+++VYLVER+D   +HE M+HLKA  F+RPT  N   L  E+ + +F EYHVFF ++ P + L+ LA ADE+EVVRQV EYYA+F  VN + FS N   +L+L+     A  + + +RN + +LS LL+LK +PS IRYAG+S  A+ +A + ++QI AD IF F R + P        +D   PL SQWTYQAMVHELLGLN NRV LKGAPGV+ KDLEEVVLS T D F+A+N+F+NFGDLG+AVK+L+D+YQ+ T++NENI+SIEDMQ+F+ERYPAFRS+SLNV+KHVA++ EL+RLVDVY L+DVSQ EQ++AC DD    +RE++ KL  + +KAPDKLRLAMLYALRYE         +K  L ++ + P+KV LLDALL Y G   RGPGLF  + +L++K  KQ+ ++L+G+ENVYAQHVPL+M  ++A  KGKL    YPA  ++    G K  +VIV+IVGGVT+EEA KVAELNA+    +VVLGGSFVHNS +FLE+L+ +FG
Sbjct:    5 MNVMAAVRSYVDKIVGDPNCPGMKVLLLDEWTTKTVAMVYSQTEILDRDVYLVERLDQAQNHEVMKHLKACVFVRPTPANFAVLTQEVRRAKFSEYHVFFSNVVPGDALKALAEADENEVVRQVQEYYADFVPVNAELFSLNQRQSLRLSTELRDAFHQDMFARNVNGLLSALLSLKLQPSVIRYAGASRVAKAVAAECASQIAADGIFHFARLESPRF-----EEDAALPLRSQWTYQAMVHELLGLNSNRVKLKGAPGVKDKDLEEVVLSATDDAFYAENKFANFGDLGMAVKDLLDDYQRQTKMNENISSIEDMQSFMERYPAFRSKSLNVTKHVALIGELSRLVDVYKLMDVSQLEQDVACNDDKSAQWREVLAKLNDAAVKAPDKLRLAMLYALRYESAQASTTDRLKLSLEENRVNPDKVALLDALLAYGGKRARGPGLFDSNKSLLAKFSKQVKSSLEGIENVYAQHVPLLMETLDAVAKGKLNAQHYPAATTATPLQGAKHDQVIVYIVGGVTYEEATKVAELNAANAGVSVVLGGSFVHNSGTFLEDLDDAFG 561          
BLAST of mRNA_Ecto-sp13_S_contig1782.5413.1 vs. uniprot
Match: A0A7S3JXK3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXK3_9STRA)

HSP 1 Score: 598 bits (1543), Expect = 2.750e-207
Identity = 314/563 (55.77%), Postives = 421/563 (74.78%), Query Frame = 3
Query:   27 MNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDA--DHEPMQHLKAVYFIRPTKGNIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDALQLALPRPPAAAKT----LLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAVRGPGLFG-QDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGS-SGGKSQEVIVFIVGGVTHEEACKVAELNASLPSG-NVVLGGSFVHNSTSFLEELNLSFGPA 1688
            MNV +A R YVD+IVSD    GMKVLLLD  TT+ V+ VYSQ+QILE++V+LVER++    HE M+HLKA  F+RPT GNI+ LC E++ P+F EYHVFF ++ PNE+L++LA ADE E VRQV E+YA++ AVNED F+ N   +L+L+         T    ++ RN  A+LS LL+LK +PS+IRY  SS  AR +A   S +++ D I+ F+ +   +LLILDR DDPVTPLLSQWTYQAMVHELLGLN+NRV +       K +EEVVLSCTQD FFAK+R+SNFGDLG AVK L+DEYQ  T +NE I++IEDMQ F++RYPAFRSQSLNVSKHV+++SEL RLVD+  L++VSQ EQ++AC +D    +R ++EKL + +IKAPDKLR+A+LY LRYED  NL  +K+ L D+ L PEK+ L+DA+L+Y+G   RGPGLFG   ++++K+   + T+L+GVENVYAQHVPL+   ++   K KLKD+++PAV   S  K  ++IVF+VGG T+EEA K+AE+N S  +G  ++LGG+++HNSTSFL++L+ +FG A
Sbjct:    1 MNVIAATRSYVDRIVSDSNNPGMKVLLLDDATTKTVSTVYSQTQILERDVFLVERLEQVDSHEAMRHLKAAVFVRPTWGNIELLCKELAAPKFSEYHVFFANVLPNEMLRRLAEADETESVRQVQEFYADYVAVNEDLFTVNQRSSLRLSNDDRGDTVTTRKNEMIERNISAILSALLSLKTQPSSIRYQASSKIARLIATQCSDRMENDGIYQFKNR-NTMLLILDRADDPVTPLLSQWTYQAMVHELLGLNNNRVKIPVHADSNKKVEEVVLSCTQDSFFAKHRYSNFGDLGGAVKQLLDEYQAQTHMNERISTIEDMQQFVQRYPAFRSQSLNVSKHVSLVSELGRLVDICDLMEVSQLEQDIACNEDRTTQWRSVLEKLANPQIKAPDKLRIALLYCLRYEDSVNLDRLKAALDDAHLPPEKIILIDAILKYAGKRARGPGLFGAHKSVLAKMTHSLKTSLEGVENVYAQHVPLLSDLIDLITKQKLKDNLFPAVSCVSAAKPAQLIVFMVGGTTYEEATKIAEINTSPTAGIKILLGGTYIHNSTSFLDDLHDAFGLA 562          
BLAST of mRNA_Ecto-sp13_S_contig1782.5413.1 vs. uniprot
Match: A0A7S2NZT5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZT5_9STRA)

HSP 1 Score: 579 bits (1492), Expect = 3.690e-199
Identity = 315/586 (53.75%), Postives = 415/586 (70.82%), Query Frame = 3
Query:   27 MNVTSAVRFYVDKIVS-DPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDAD------------------------HEPMQHLKAVYFIRPTKGNIQTLCAEISKPRFLEYHVFFCSIC-PNE-LLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPD-ALQLALPRPPAAAKT---LLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQK--ATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAVRGPGLFGQDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGSSGG----KSQEVIVFIVGGVTHEEACKVAELNASLPSGNV--VLGGSFVHNSTSFLEEL 1667
            M+  ++++ Y++++++ D K  GMKVLLLDA+T+QVV+ V SQ++IL +EVYLV R+D                               HLKAV F+RPT+ N Q L  E+  P+F EYH+FF  I  PN  L + LA ADE E V Q+ E+Y +F  +NED  + NC D +L +      A A+    L  R+R+ + S+LLALK+KPS IRY  SS+ A++LAMD+   + +DQIF FR + GP+LL+LDR DDPVTPLLSQWTYQAMVHELLGLN+NRV+LKGAPGV KDLEEVVLS +QDDFF  NR SNFG+LG A+K L+D++QK       ENI SIEDMQ F+E++P  R+QS NVSKHVA++ ELARLVDV  L+DVSQFEQELACADDH  H+REL+EKL + R+K PDKLRL +LYALRYE  GNL  VKS++  SG++ + ++L+D +L+Y+G +VRGPGL+G  ++M+K+ K + T++QGV NVY+QHVP++M  +   LKGKLK+S +P V    G    +  E+I+FI GGVT EEA K++E NAS  +G V  +LGGS +HNSTSFLEEL
Sbjct:    1 MDGIASIQTYINRLIAGDGKCDGMKVLLLDAMTSQVVSCVTSQTEILNREVYLVTRLDRHVLSSNKSNNQGSMTNGHTMNNGSLGSSTSHLKAVCFLRPTETNFQLLVEELRNPKFAEYHLFFAGIVNPNSGLFRMLAEADEKERVVQLQEFYGDFVPINEDLVTLNCRDHSLAMTANAGTALAREYVHLYERHREGLCSILLALKRKPSAIRYQQSSALAKQLAMDVHEAVLSDQIFHFRGK-GPLLLVLDRMDDPVTPLLSQWTYQAMVHELLGLNNNRVLLKGAPGVNKDLEEVVLSASQDDFFKVNRHSNFGELGEAIKKLLDDFQKQQTQHRRENITSIEDMQQFMEKFPQLRTQSHNVSKHVAIMGELARLVDVCSLMDVSQFEQELACADDHASHFRELLEKLGNPRVKTPDKLRLGLLYALRYEQSGNLNMVKSQMQKSGVSADMIELMDKMLRYAGASVRGPGLYGSGDIMTKMTKSLITSVQGVNNVYSQHVPVVMDIINNVLKGKLKESSHPFVEKPLGGVITRPNEIIIFIAGGVTFEEATKISEFNASSQNGGVKILLGGSTIHNSTSFLEEL 585          
BLAST of mRNA_Ecto-sp13_S_contig1782.5413.1 vs. uniprot
Match: A0A7S2C6S3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C6S3_9STRA)

HSP 1 Score: 575 bits (1482), Expect = 4.450e-199
Identity = 283/493 (57.40%), Postives = 370/493 (75.05%), Query Frame = 3
Query:  198 ADHEPMQHLKAVYFIRPTKGNIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDALQLALPRPPAAAKTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAVRGPGLFGQDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGS-SGGKSQEVIVFIVGGVTHEEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELNL 1673
            +DHEPM HLKA  F+RPT  N+  L  E + P+F EYH+FF +I   +LLQ LA +DEHEVV+QV E+Y +F AVNED FS N  D+L+L+ P        +  R    +LSVLL++K +PS IRY G S  A+ LA+++  +IQ D IF F RQ+GP+LLILDR+ DPVTPLLSQWTYQAMVHELLGLN+NRVVLKGAPGV KD+EEVVLS TQD FFA+ R +NFGDL  ++K L+D++QK  +LNENI+S+EDMQ+F+ERYPAFRSQS NVSKHVA++SEL+RLV+   L+DVSQ EQ+LAC D+H   ++ELM  + +  +K+ DKLRLA+LY+LRYE+  N+  +K  L+D G+   KVD+LD +L+Y+G   R PGL+G  + MS++ K + T L GVENVY QH PLMM  ++AA+KGKL++S YPA+G   G + + ++VFIVGG T+EE  KVAELNAS P   ++LGG+ +HNS SFLEEL +
Sbjct:    1 SDHEPMPHLKAAVFVRPTAENVAILSREFADPQFKEYHLFFSNIISLDLLQALAESDEHEVVKQVQEFYGDFIAVNEDLFSLNMGDSLRLSAPSGAFDTTAIFDRTAQGLLSVLLSMKVEPSQIRYQGGSQMAQRLAVEVDKRIQGDGIFHFTRQEGPMLLILDRKCDPVTPLLSQWTYQAMVHELLGLNNNRVVLKGAPGVSKDMEEVVLSSTQDTFFAQQRHANFGDLAGSIKELLDDFQKNKKLNENISSVEDMQSFMERYPAFRSQSHNVSKHVALMSELSRLVNHCSLMDVSQLEQDLACNDEHSAQFKELMNSIRAEHVKSADKLRLAILYSLRYEETANIAQLKRELIDGGVQQHKVDILDVVLRYAGKTQRAPGLYGDRSFMSRMAKNLQTGLNGVENVYTQHQPLMMGTLDAAIKGKLRESAYPAIGPIPGAQPRSIVVFIVGGATYEEGTKVAELNASNPGVQILLGGNTIHNSVSFLEELRV 493          
BLAST of mRNA_Ecto-sp13_S_contig1782.5413.1 vs. uniprot
Match: A0A8J2SE02_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE02_9STRA)

HSP 1 Score: 577 bits (1488), Expect = 6.750e-199
Identity = 314/568 (55.28%), Postives = 413/568 (72.71%), Query Frame = 3
Query:   27 MNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDA--DHEPMQHLKAVYFIRPTKGNIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDALQLALPRPPAAAKTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQ------GPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKD--LEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAVRGPGLFGQD-NLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGSSGGKSQ-----EVIVFIVGGVTHEEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELNLSFG 1682
            MNV +A R YVD+IVSDP   GMKVLLLDA TT+ VA VYSQ++IL+++V+LVER+D    HEPM+HLKA  F+RPT  N   L  E++ PRF EYH++F ++ P   L++LA +D+ EVVRQV E+YA+F  VN+  F+ N   AL+L   RP A    LL RN D VLS LLALK +P+TIRY+ +S+ A+ +A ++   + AD IF F+R+       GP+LLILDR DD VTPLLSQWTYQAMVHELLG+N+NRV LKG    R D  L+EVVLS   D F+A+++ +NFGDLG AVK L+D+YQ+ T+LNENI SI+DMQ+FLERYPAFRS+SLNVSKHVA++SEL+RLV+ + L+DVSQ EQELAC DD     RE++ ++   RI   DKLRLA+LYALRYE  GN+  +K  L +  + P++V L+DALL+Y G + R  GLFG D +L++K  KQ+ ++L+G+ENVYAQHVPL++  ++   K +L ++ YP V  +G   Q     EV+V+I GG T+EEA KVAELNAS     VVLGGS+VHNS +FLE+L+ +FG
Sbjct:    1 MNVLAATRAYVDRIVSDPNNPGMKVLLLDAETTKTVANVYSQTEILDRDVFLVERLDQARGHEPMRHLKAAAFVRPTAANFALLRRELADPRFGEYHLYFANVAPRAQLRELAESDDLEVVRQVQEFYADFVPVNDALFTLNQRQALRLNTTRPTA---DLLRRNVDGVLSSLLALKVQPATIRYSSASTVAKAIATEVQRAVAADGIFHFKRRATASDTGGPLLLILDRADDCVTPLLSQWTYQAMVHELLGVNNNRVRLKGTASARGDPNLDEVVLSAAADPFYAQHQHANFGDLGTAVKQLLDDYQRQTKLNENIKSIDDMQSFLERYPAFRSKSLNVSKHVALISELSRLVETHSLMDVSQLEQELACHDDGASQRREVLARIGDGRIGGEDKLRLALLYALRYEQTGNVEGLKLALAEHRVAPDRVSLVDALLRYGGRSARTAGLFGGDTSLLAKFSKQVKSSLEGIENVYAQHVPLLLETLDLVSKNRLPEARYPCV--TGAPVQALRPAEVVVYIAGGATYEEATKVAELNAS-GGIQVVLGGSYVHNSGTFLEDLDDAFG 562          
BLAST of mRNA_Ecto-sp13_S_contig1782.5413.1 vs. uniprot
Match: A0A7S2N3U2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N3U2_9STRA)

HSP 1 Score: 578 bits (1489), Expect = 1.050e-198
Identity = 314/586 (53.58%), Postives = 415/586 (70.82%), Query Frame = 3
Query:   27 MNVTSAVRFYVDKIVS-DPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMD----------------------ADHEPMQHLKAVYFIRPTKGNIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDALQLALPRPPAAAKT---LLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGP------VLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNE--NINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAVRGPGLFG--QDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAV-GSSGGKS-QEVIVFIVGGVTHEEACKVAELNASLPSG-NVVLGGSFVHNSTSFLEEL 1667
            M+  +A+R YVD++V+ D +  GMKVLLLDA TTQ V+ VYSQ++IL +EVYLV R+D                       DH    HLKAV F+RPT+ N   +  E++ PRF EYH+FF  I P+ LL+ +A  D  E+VRQV E+Y +F  VNED  + NC + + + +    A A+    L  RN + V S+LLAL+++P+ IRY  SS+ A +LA D++  I ADQIF FRR +G       +LL+LDR DDPVTPLLSQWTYQAMVHELLGLN+NRVVL+GAP + +DLEEVVLS  QD+FF KNR +NFG+LG ++K L+D+YQK TR +   N+N+IEDMQ F+E++P  RSQS NVSKHVA++ ELARLVDV  L+DVSQFEQELACADDH  H REL++KL+S  +K PDKLRL +LYALRYE  GN+  +KS +   G+ PE ++ +D +L+Y+G+  RGPGL+G    +L+SK+ K I T++QGV NVY+QHVP++M  +++A++GKL    +P V GSS G + QE+IVF+ GGVT+EEA K++E N S P    V+LGGS VHNSTSFLEEL
Sbjct:    1 MDGVAAIRSYVDRLVTGDGRCRGMKVLLLDASTTQTVSCVYSQTEILSREVYLVSRIDDGGQNPNIERHDDKGGKPRSEQKDHHQTSHLKAVCFLRPTEINAGLIVKELANPRFAEYHLFFSGIVPSGLLRLIAENDGRELVRQVQEFYGDFLPVNEDCLTLNCRNTVAMTMSAGTAWARDHAHLYQRNLEGVQSMLLALRRQPARIRYQASSALAGQLARDVADSIAADQIFHFRRGKGGDGYGNLLLLVLDRLDDPVTPLLSQWTYQAMVHELLGLNNNRVVLRGAPNIARDLEEVVLSAQQDEFFRKNRHANFGELGESIKKLLDDYQKQTRTHNVSNLNTIEDMQNFMEKFPELRSQSHNVSKHVAIMGELARLVDVCSLMDVSQFEQELACADDHGAHVRELLDKLSSPSVKIPDKLRLGLLYALRYEKNGNVPMIKSEMEKGGVPPESIEFVDTILKYAGSKSRGPGLYGVGSKDLVSKMTKSILTSVQGVSNVYSQHVPVLMDTIQSAVRGKLHPKSHPYVLGSSDGPAPQEIIVFMAGGVTYEEATKISEYNNSNPGKVRVILGGSTVHNSTSFLEEL 586          
BLAST of mRNA_Ecto-sp13_S_contig1782.5413.1 vs. uniprot
Match: A0A482SMX5_9ARCH (Sec1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMX5_9ARCH)

HSP 1 Score: 574 bits (1480), Expect = 3.760e-198
Identity = 288/535 (53.83%), Postives = 393/535 (73.46%), Query Frame = 3
Query:   93 MKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDADHEPMQHLKAVYFIRPTKGNIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDALQLALPRPPAAAKTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAVRGPGLFGQDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGSSGG-----KSQEVIVFIVGGVTHEEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELNLSFG 1682
            MKVLLLD  T +VV+MVYSQ+Q+LEKEVYL+E +   HE M HLKA  F++PT+ N   L  E+++P++ EYH+FF ++ P ++L +LA  DE E++ Q+ EYYA++ A+NEDFF     ++L L+       +  +  RN + +LSVLL+LKK PS IRY  SS  AR LA D+   I+  + FDFRRQ G +L+ILDRRDDP+TPLL+QWTYQAMVHELLGLN+NRV+L+GAPG+ K+LEEVVLS TQDDFF ++RF+NFGDLGVAVK L+D+YQK T+ NENINSIEDMQ+FLERYP FRS+S+NVSKHVAV+SEL+RL D+  LLD+S+ EQE+AC +D   H ++L+ ++ + ++K  DK+R+++LY LRYE   +LR +K  L + G+    + LLDA+L+Y+G A R PGLF Q  +M+KL K   + + GV+NVY QH P++   ++  L GKLKDS +P + ++GG     +  EVI+F+VGG T EE+ +VAE NA+     ++LGGS V NSTSFL+E+   FG
Sbjct:    1 MKVLLLDQATKKVVSMVYSQTQVLEKEVYLIELLGVRHESMSHLKAAVFVQPTEANYDLLVRELAEPKYKEYHLFFNNVVPQDMLARLARLDEQELIMQIQEYYADYQAINEDFFHLGIDNSLILSSASRTLESGQVFERNVNGILSVLLSLKKIPSQIRYQSSSELARRLASDVLTNIEKGEPFDFRRQDGVMLMILDRRDDPITPLLTQWTYQAMVHELLGLNNNRVILRGAPGITKELEEVVLSATQDDFFRRHRFANFGDLGVAVKQLLDDYQKLTKKNENINSIEDMQSFLERYPDFRSKSINVSKHVAVISELSRLTDLCQLLDISEVEQEIACNNDRSTHKQDLLGRIRNPKVKMADKVRMSILYILRYESYDDLREIKQALAEKGVQVASLSLLDAVLEYAGEAKRAPGLFSQGGIMAKLTKTFNS-VGGVQNVYTQHQPVLFHIMQNILNGKLKDSAFPPLLTAGGSGTNFRPTEVIIFMVGGATFEESTRVAEFNAANNGIKIMLGGSCVQNSTSFLKEIGTVFG 534          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1782.5413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJK3_ECTSI0.000e+098.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YSG2_9STRA3.330e-24564.49Sec1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S3M2G5_9STRA1.920e-22357.22Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
F0XW02_AURAN5.160e-20857.12Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3JXK3_9STRA2.750e-20755.77Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2NZT5_9STRA3.690e-19953.75Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2C6S3_9STRA4.450e-19957.40Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2SE02_9STRA6.750e-19955.28Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2N3U2_9STRA1.050e-19853.58Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A482SMX5_9ARCH3.760e-19853.83Sec1 family protein n=1 Tax=archaeon TaxID=1906665... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1782contigEcto-sp13_S_contig1782:2946..7364 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1086.2
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FJK3
Preferred nameVPS45
Model size1778
KEGG rclassRC00053,RC00209,RC00870
KEGG koko:K03495,ko:K12479,ko:K20367
KEGG ReactionR08701
KEGG Pathwayko04138,ko04144,map04138,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000011,GO:0000139,GO:0000149,GO:0000325,GO:0001505,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005794,GO:0005802,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006836,GO:0006873,GO:0006885,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006896,GO:0006897,GO:0006898,GO:0006906,GO:0006907,GO:0006950,GO:0006996,GO:0007033,GO:0007034,GO:0007035,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007596,GO:0007599,GO:0008021,GO:0008104,GO:0008150,GO:0009611,GO:0009705,GO:0009987,GO:0010008,GO:0010638,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016082,GO:0016192,GO:0016482,GO:0017156,GO:0019725,GO:0019898,GO:0022607,GO:0023052,GO:0023061,GO:0030003,GO:0030004,GO:0030133,GO:0030641,GO:0031090,GO:0031201,GO:0031224,GO:0031334,GO:0031338,GO:0031340,GO:0031410,GO:0031982,GO:0031984,GO:0032258,GO:0032501,GO:0032588,GO:0032879,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034058,GO:0034613,GO:0034622,GO:0035542,GO:0035543,GO:0042060,GO:0042592,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045851,GO:0046903,GO:0046907,GO:0048193,GO:0048210,GO:0048227,GO:0048284,GO:0048308,GO:0048489,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050817,GO:0050878,GO:0050896,GO:0051049,GO:0051050,GO:0051082,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055067,GO:0055080,GO:0055082,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070382,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098657,GO:0098771,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140029
Exons11
EggNOG free text desc.vesicle docking involved in exocytosis
EggNOG OGsCOG5158@1,KOG1299@2759
Ec32 ortholog descriptionSec1-like protein
Ec32 orthologEc-04_006430.1
Cds size1701
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03016,ko03036,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1782.5413.1prot_Ecto-sp13_S_contig1782.5413.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1782 2966..7307 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462923.3664906-UTR-Ecto-sp13_S_contig1782:2945..29651681462923.3664906-UTR-Ecto-sp13_S_contig1782:2945..2965Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1782 2946..2965 +
1681462923.4800713-UTR-Ecto-sp13_S_contig1782:7307..73641681462923.4800713-UTR-Ecto-sp13_S_contig1782:7307..7364Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1782 7308..7364 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462923.3780017-CDS-Ecto-sp13_S_contig1782:2965..30351681462923.3780017-CDS-Ecto-sp13_S_contig1782:2965..3035Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1782 2966..3035 +
1681462923.3882139-CDS-Ecto-sp13_S_contig1782:3696..39841681462923.3882139-CDS-Ecto-sp13_S_contig1782:3696..3984Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1782 3697..3984 +
1681462923.396957-CDS-Ecto-sp13_S_contig1782:4237..44371681462923.396957-CDS-Ecto-sp13_S_contig1782:4237..4437Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1782 4238..4437 +
1681462923.40571-CDS-Ecto-sp13_S_contig1782:4862..49511681462923.40571-CDS-Ecto-sp13_S_contig1782:4862..4951Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1782 4863..4951 +
1681462923.4142282-CDS-Ecto-sp13_S_contig1782:5131..52851681462923.4142282-CDS-Ecto-sp13_S_contig1782:5131..5285Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1782 5132..5285 +
1681462923.4231474-CDS-Ecto-sp13_S_contig1782:5442..56061681462923.4231474-CDS-Ecto-sp13_S_contig1782:5442..5606Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1782 5443..5606 +
1681462923.4331264-CDS-Ecto-sp13_S_contig1782:5845..60281681462923.4331264-CDS-Ecto-sp13_S_contig1782:5845..6028Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1782 5846..6028 +
1681462923.4412327-CDS-Ecto-sp13_S_contig1782:6141..62931681462923.4412327-CDS-Ecto-sp13_S_contig1782:6141..6293Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1782 6142..6293 +
1681462923.4493253-CDS-Ecto-sp13_S_contig1782:6438..65211681462923.4493253-CDS-Ecto-sp13_S_contig1782:6438..6521Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1782 6439..6521 +
1681462923.457335-CDS-Ecto-sp13_S_contig1782:6714..68401681462923.457335-CDS-Ecto-sp13_S_contig1782:6714..6840Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1782 6715..6840 +
1681462923.4653754-CDS-Ecto-sp13_S_contig1782:7115..73071681462923.4653754-CDS-Ecto-sp13_S_contig1782:7115..7307Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1782 7116..7307 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1782.5413.1

>prot_Ecto-sp13_S_contig1782.5413.1 ID=prot_Ecto-sp13_S_contig1782.5413.1|Name=mRNA_Ecto-sp13_S_contig1782.5413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=567bp
MAMNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEK
EVYLVERMDADHEPMQHLKAVYFIRPTKGNIQTLCAEISKPRFLEYHVFF
CSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDALQLA
LPRPPAAAKTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDIS
AQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLND
NRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEY
QKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVY
HLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRY
EDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAVRGPGLFGQDNLMS
KLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGSSGGK
SQEVIVFIVGGVTHEEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELN
LSFGPASQERGLGAFR*
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mRNA from alignment at Ecto-sp13_S_contig1782:2946..7364+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1782.5413.1 ID=mRNA_Ecto-sp13_S_contig1782.5413.1|Name=mRNA_Ecto-sp13_S_contig1782.5413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4419bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1782:2946..7364+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCAATTCGGTGCTTTGCAACATGGCCATGAACGTCACCTCAGCTGTGCGC TTCTATGTTGACAAAATTGTCTCCGATCCCAAGATATCAGGTATGCATAT GTTCTCTTGCTCTGGTGACAGATACTTCGATACAGTTGGGTATTGTTGGC TGTGGCAGTGTATTTGTTAGCCGCATTGCAGAGTATCGTCTCCTAAAAAC CGAAAATTAGTTAATTACTTGAGATCGCGCAGATCAATTAAATTTGCCCA AGCAGTGTCAGGTGGGAGAGGATTCGTAGAAGAACTGCTGTTCCTCCGTA CACGATTTCGCTCATAGAGAAGCCGGGATGCACTGACTGACTCCTGGCAC CAGGGCTTTTCGTTGTTTTTTTGCTATTAAGAAAGAGTTTTTCACCTCAA GTTCAACGATTAGTGCGCGGAGTGTTCTAGGGGACAGACCACCCTGTTCG TGAGCTAGTCGGTTTAAGTTCGACGCTATGAGCCTTGCTTGGCGATATTT GCACATGGCCAAAGATCGTCGGCCACAACGCGCTGGCGCCCGACAGAATT GACCGCGCCTCCATGTATCGTCTCCACAACACCGTAAACCCAGAACCAAA AATATTCCCCAAATCAAAAACAACTAATTAATTAAACAAACACCCCCCAT ATCTGATTGTCCATGTTCCAAGCCATATTGGCGTTCAATCTCTTTCTGTT TCTCTCCTCTCCCGACTCCGCGCGTATTCGCTCTAATTCGGAAAACTGCA GGTATGAAGGTCCTGCTACTGGATGCAGTGACTACCCAAGTTGTGGCGAT GGTATACTCGCAGTCGCAAATCCTCGAAAAGGAAGTCTATCTGGTGGAAA GGATGGACGCGGATCACGAGCCGATGCAGCACCTCAAGGCGGTTTACTTC ATCCGGCCAACAAAGGGGAACATCCAGACGCTTTGCGCGGAGATCTCCAA ACCGCGGTTCTTGGAGTACCACGTATTCTTCTGTAGCATCTGTCCCAATG AACTACTACAGCAGCTGGCCGCTGCTGACGAGCACGAAGGTGAGAGGTAC TCCCTGCTCTCATGTCTGGTATTCTTTTTCCTCGGAAACAAATCTGTTTG GTGACGTCAAAACAAGAGAGTCAGGCCCGTGGCAAGTGAACCTATCCTAC AACACAGGATTTGGAGAAGCGTGGTAGCACACCATGTATGTAGTCCGTGT CATACAATGGAGCCAGACTGCATGGAGCAAGGGAGCAAGTCGTCCGCCTG CATGGTACACTAACCTCGAGAACACCCGTTCGGTCACGCCAGTTGTTCGT CAGGTGCACGAGTACTACGCGGAGTTCTGCGCCGTGAACGAGGACTTCTT CTCCGCCAACTGCCCGGATGCTCTTCAGCTAGCCTTGCCCAGGCCCCCTG CAGCTGCCAAGACGCTTCTCTCGCGCAACAGGGATGCTGTTCTGTCGGTG CTTCTCGCGCTCAAGAAAAAACCGTCTACCATCAGATATGCGGTGAGAGC CAGAGAGAGAGCGACGGTCGTCGGACGCGGAGGGCATCATTCACCATTGT GGTACTGCTGTTATGTTTCGTGGCTCCTTGTTGACTGCTGTATCGTCTCG CTGCGGTCTCCCAGGGAGGAAAACGAAATTCGTCCAATACCACACACAAC GGACGTGGTGATTTTTGAAGACGACGGCAGTCAGGGGCACTCAAGACAGA CAGAGTATGAGATTGATCCACATCTGTAGCAGTGTTGAATAGTTAAGGGT GATAGCAAAGTACCAGTGGAGCTCGTTAAGAATCAGGCAATGGTCAAATT GCCTAAAATCTCTTCACCGTACCCATCCGTGGGCAATGCCGGGCAATGCC CGCTTGACCTCTTGGGATGTTGTTTGCGCCTTTTCGCTGTTTGGTCCCGC GCCATTGCACCCTTCAGGGTTCGTCCTCGACCGCCCGCGAGCTGGCCATG GATATCTCAGCTCAGATTCAGGCCGATCAGATCTTCGACTTTCGAAGACA GCAAGGGTAAGCTGGTTTCCGTTGATGAATGGTGGCATGAGCTGTGCTCG AGTAAAGAAAAAAGTCCCGACTATGTGGTAACAAATATGATGCTCGAGGT GCCACAGGAATCTTGTGCGGGAAAAACAAGTATGGACTGAGATGCGTGTT GTATTTCCCATCTTCGTGTGCACTTTCTTCGAGCAGACCTGTCTTGCTGA TCTTGGATCGACGTGACGACCCAGTGACTCCGTTACTTTCGCAATGGACA TACCAAGCGATGGTTCACGAGCTCTTGGGGCTCAACGACAACCGGGTGGT TCTCAAGGGGGCACCTGGAGTGCGGAAAGATCTTGAAGAGGTGATATATG ATGGGATTCTTGAGGCGGTGTCTTCGCTGTGGCTTCAAGATGTGCTGCAA TCGTCGTCTGCTGTAGATTCATGGATTGTGGCCACCCAAATTCCGGCGTT TGTCCTGACTGGCCCAATCTGTTTTGCGTTTGTGCCTTGATGCGCAGGTA GTTCTTTCCTGCACACAGGACGACTTCTTCGCGAAAAACCGCTTTTCTAA CTTCGGAGATCTAGGAGTGGCGGTGAAAAATCTGATGGATGAATACCAGA AGGCGACGCGATTAAACGAAAACATCAACAGCATTGAAGACATGCAGGCG TTTCTCGAGCGGTAAGTTTTGGGCGGAAGCTGTTGAAGCTCTTGCTGATT GGCTCAGGGTAGTACTGTCGCCCAAATACGTTTCGGTGCTGGTAACGACA TAATACCTGGGAACCCACGTTGCCGATGTATCGAGTTGGGCTTGATTGAG TTTTTTGTTCTCTGAAAGCGATGCAATGGTGGTGGATGGCCACAATTTTT GACGCTTCTTGCTCCACGCGCCACTGCGACCATGATTATCTGCGCCACAG GTATCCTGCTTTCCGGTCGCAGTCACTCAACGTGTCCAAGCACGTGGCTG TCTTAAGCGAGCTGGCTCGCCTCGTAGACGTCTATCACCTTCTGGACGTC AGCCAATTCGAGCAAGAGCTGGCTTGTGCAGACGACCACGTATTGCACTA CCGCGAGCTTATGGAGAAGCTTACCAGTTCGAGGTACGTCCGCCCACGGT GGCTTGACAAGTACTCCTGACCCGAGAACCACCAGCGTTTTTGTTGCGCA TCATGCAATACAACCAACGTCCCCGTCTTGTATGTTTTGTGCGCAGGATT AAGGCGCCGGACAAACTGCGCCTGGCGATGCTGTACGCGCTGCGCTACGA GGACATGGGTAACCTTCGCGCAGTAAAGTCGCGTCTCCTTGATTCCGGGC TAACTCCGGAGAAGGTGGACCTACTGGATGCTCTCTTGCAATACTCAGGT GTGGCTTTGAAATATCCATCCACGCGTCTGTGTTTTCTCTGATTGTTACA GCCCAAGTCGTAAAAATAGAGAGTCTTCAAACTTTTTTGCCGCTGCGAGT GTCACCAGCCTCTGACAATGCGACAACTGACTGTGTTTCGCAGGAAACGC AGTACGGGGACCGGGCCTCTTCGGTCAAGACAACCTCATGTCCAAACTGG GCAAACAGATCACCACGACCCTCCAGGTATGCCAACTCTCATCTGCGAGT AGGAACTAAATACATGTTTTGCAAAGTTGGGAATTTTGCAACGGAAGGCC TCAGCACTTTCGTGGTGAGGGCGCAATGTAAGTATTCGGTGGTTCTCACG TTTGGGCATTTTCCTCGCCAAATTGCTGTGTTCATGTCGCGGACTGTTCA TTGGAAACATTTTGACCAGGGGGTCGAGAACGTGTACGCTCAGCACGTGC CGCTGATGATGACTGCGGTTGAAGCAGCTCTTAAAGGGAAGCTCAAGGAT AGCGTCTACCCTGCTGTCGGGTCGTCTGGTGGCAAATCTCAGGAGGTGGG AGCGAGTCAAAGGTCTTGTGGGAGAAGCGATTTGAGTCCGGGCCTGTTCA ATTACACATGGGTTAATTGTCGTCAAGTGTAGGTGGTCATACGGCTGCAC GCAATGGAATTTGTCGATTAGCTCTTTGGATACGCCTCGGCTTGGTTGCT CTTTGTCGCCGATCAGGGCAGGTGCTTCGACCAGGACTGATTCATCATGC GCTCGGCTGTTATTGACTATCGTTCTGTTCCTCTTTCTGCGCGACTTCTT GCCTTGCCCGCACGTTGTAGGTCATCGTGTTCATTGTAGGGGGAGTGACG CATGAGGAAGCCTGCAAGGTTGCCGAGCTCAACGCGTCTCTGCCGTCCGG GAATGTTGTGCTTGGGGGATCGTTTGTGCACAACAGCACCTCTTTTCTTG AAGAGTTGAACTTGAGCTTTGGTCCAGCTAGCCAAGAGCGAGGTCTGGGT GCGTTTAGGTGAAATTATGCGAATTATAGTGTACGTACAGAAACTGTTGA GAGTAACACAAAGTTTGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1782:2946..7364+

>mRNA_Ecto-sp13_S_contig1782.5413.1 ID=mRNA_Ecto-sp13_S_contig1782.5413.1|Name=mRNA_Ecto-sp13_S_contig1782.5413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1701bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1782:2946..7364+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCATGAACGTCACCTCAGCTGTGCGCTTCTATGTTGACAAAATTGT
CTCCGATCCCAAGATATCAGGTATGAAGGTCCTGCTACTGGATGCAGTGA
CTACCCAAGTTGTGGCGATGGTATACTCGCAGTCGCAAATCCTCGAAAAG
GAAGTCTATCTGGTGGAAAGGATGGACGCGGATCACGAGCCGATGCAGCA
CCTCAAGGCGGTTTACTTCATCCGGCCAACAAAGGGGAACATCCAGACGC
TTTGCGCGGAGATCTCCAAACCGCGGTTCTTGGAGTACCACGTATTCTTC
TGTAGCATCTGTCCCAATGAACTACTACAGCAGCTGGCCGCTGCTGACGA
GCACGAAGTTGTTCGTCAGGTGCACGAGTACTACGCGGAGTTCTGCGCCG
TGAACGAGGACTTCTTCTCCGCCAACTGCCCGGATGCTCTTCAGCTAGCC
TTGCCCAGGCCCCCTGCAGCTGCCAAGACGCTTCTCTCGCGCAACAGGGA
TGCTGTTCTGTCGGTGCTTCTCGCGCTCAAGAAAAAACCGTCTACCATCA
GATATGCGGGTTCGTCCTCGACCGCCCGCGAGCTGGCCATGGATATCTCA
GCTCAGATTCAGGCCGATCAGATCTTCGACTTTCGAAGACAGCAAGGACC
TGTCTTGCTGATCTTGGATCGACGTGACGACCCAGTGACTCCGTTACTTT
CGCAATGGACATACCAAGCGATGGTTCACGAGCTCTTGGGGCTCAACGAC
AACCGGGTGGTTCTCAAGGGGGCACCTGGAGTGCGGAAAGATCTTGAAGA
GGTAGTTCTTTCCTGCACACAGGACGACTTCTTCGCGAAAAACCGCTTTT
CTAACTTCGGAGATCTAGGAGTGGCGGTGAAAAATCTGATGGATGAATAC
CAGAAGGCGACGCGATTAAACGAAAACATCAACAGCATTGAAGACATGCA
GGCGTTTCTCGAGCGGTATCCTGCTTTCCGGTCGCAGTCACTCAACGTGT
CCAAGCACGTGGCTGTCTTAAGCGAGCTGGCTCGCCTCGTAGACGTCTAT
CACCTTCTGGACGTCAGCCAATTCGAGCAAGAGCTGGCTTGTGCAGACGA
CCACGTATTGCACTACCGCGAGCTTATGGAGAAGCTTACCAGTTCGAGGA
TTAAGGCGCCGGACAAACTGCGCCTGGCGATGCTGTACGCGCTGCGCTAC
GAGGACATGGGTAACCTTCGCGCAGTAAAGTCGCGTCTCCTTGATTCCGG
GCTAACTCCGGAGAAGGTGGACCTACTGGATGCTCTCTTGCAATACTCAG
GAAACGCAGTACGGGGACCGGGCCTCTTCGGTCAAGACAACCTCATGTCC
AAACTGGGCAAACAGATCACCACGACCCTCCAGGGGGTCGAGAACGTGTA
CGCTCAGCACGTGCCGCTGATGATGACTGCGGTTGAAGCAGCTCTTAAAG
GGAAGCTCAAGGATAGCGTCTACCCTGCTGTCGGGTCGTCTGGTGGCAAA
TCTCAGGAGGTCATCGTGTTCATTGTAGGGGGAGTGACGCATGAGGAAGC
CTGCAAGGTTGCCGAGCTCAACGCGTCTCTGCCGTCCGGGAATGTTGTGC
TTGGGGGATCGTTTGTGCACAACAGCACCTCTTTTCTTGAAGAGTTGAAC
TTGAGCTTTGGTCCAGCTAGCCAAGAGCGAGGTCTGGGTGCGTTTAGGTG
A
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