prot_Ecto-sp13_S_contig1782.5412.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1782.5412.1 vs. uniprot
Match: D7FJK2_ECTSI (Similar to ribosomal protein S29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK2_ECTSI) HSP 1 Score: 159 bits (403), Expect = 2.720e-49 Identity = 78/89 (87.64%), Postives = 80/89 (89.89%), Query Frame = 0
Query: 1 SLSAFSACPR--LSSQGHTRRSALLPPPAALHLLTMGSKALVNSHPKNFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVHATEIGFTK 87
SLS F P LSSQGHTR SALLPPP ALHLLTMGSKALVNSHPK+FGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRV+ATEIGFTK
Sbjct: 8 SLSTFQRAPSASLSSQGHTRCSALLPPPVALHLLTMGSKALVNSHPKSFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVYATEIGFTK 96
BLAST of mRNA_Ecto-sp13_S_contig1782.5412.1 vs. uniprot
Match: A0A835YKD0_9STRA (Putative 40S ribosomal protein RPS29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD0_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.860e-23 Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 0
Query: 34 MGSKALVNSHPKNFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVHATEIGFTK 87
MG+KAL NSHPK +GKGG CRVC+NQHG+I+KYG+ MCRQCFR +A +IGF K
Sbjct: 1 MGAKALQNSHPKAYGKGGNKCRVCANQHGIIKKYGINMCRQCFRTYAYDIGFHK 54
BLAST of mRNA_Ecto-sp13_S_contig1782.5412.1 vs. uniprot
Match: UPI00189EBBD0 (40S ribosomal protein S29 n=1 Tax=Choloepus didactylus TaxID=27675 RepID=UPI00189EBBD0) HSP 1 Score: 91.3 bits (225), Expect = 1.720e-22 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 0
Query: 22 LLPPPAALHLLTMGSKALVNSHPKNFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVHATEIGFTK 87
+LP ++LH MG + L SHP+ FG+G R CRVCSN+HGLIRKYGL MCRQCFR +A +IGF K
Sbjct: 4 ILPSFSSLHPWKMGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 69
BLAST of mRNA_Ecto-sp13_S_contig1782.5412.1 vs. uniprot
Match: Q209Q3_9CHLO (Ribosomal protein S29 subunit n=1 Tax=Chlamydomonas sp. ICE-L TaxID=309537 RepID=Q209Q3_9CHLO) HSP 1 Score: 90.1 bits (222), Expect = 3.340e-22 Identity = 38/54 (70.37%), Postives = 43/54 (79.63%), Query Frame = 0
Query: 34 MGSKALVNSHPKNFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVHATEIGFTK 87
MG + NSHPKN+G+G RHCRVCSN HGLIRKYGL +CRQCFR A +IGF K
Sbjct: 1 MGHDTVWNSHPKNYGQGSRHCRVCSNVHGLIRKYGLNICRQCFREKAADIGFIK 54
BLAST of mRNA_Ecto-sp13_S_contig1782.5412.1 vs. uniprot
Match: G7YKF2_CLOSI (40S ribosomal protein S29 n=3 Tax=Digenea TaxID=6179 RepID=G7YKF2_CLOSI) HSP 1 Score: 89.4 bits (220), Expect = 6.730e-22 Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0
Query: 34 MGSKALVNSHPKNFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVHATEIGFTK 87
MG + +SHPK++G+G RHCRVCSN+HGLIRKYGL MCRQCFR++A IGF K
Sbjct: 1 MGHANIWHSHPKDYGQGSRHCRVCSNRHGLIRKYGLNMCRQCFRMYANVIGFRK 54
BLAST of mRNA_Ecto-sp13_S_contig1782.5412.1 vs. uniprot
Match: A0A6J1U725_9SAUR (40S ribosomal protein S29 n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A6J1U725_9SAUR) HSP 1 Score: 88.6 bits (218), Expect = 1.360e-21 Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0
Query: 34 MGSKALVNSHPKNFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVHATEIGFTK 87
MG + L SHP+ FG+G R CRVCSN+HGLIRKYGL MCRQCFR +A +IGFTK
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFTK 54
BLAST of mRNA_Ecto-sp13_S_contig1782.5412.1 vs. uniprot
Match: A0A183ANC3_9TREM (40S ribosomal protein S29 n=1 Tax=Echinostoma caproni TaxID=27848 RepID=A0A183ANC3_9TREM) HSP 1 Score: 88.2 bits (217), Expect = 1.930e-21 Identity = 36/54 (66.67%), Postives = 46/54 (85.19%), Query Frame = 0
Query: 34 MGSKALVNSHPKNFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVHATEIGFTK 87
MG ++ +SHPKN+G+G R CRVC+N+HGLIRKYGL MCRQCFR++A+ IGF K
Sbjct: 1 MGHASIYHSHPKNYGQGSRCCRVCANKHGLIRKYGLNMCRQCFRMYASVIGFRK 54
BLAST of mRNA_Ecto-sp13_S_contig1782.5412.1 vs. uniprot
Match: UPI00090E0E50 (Uncharacterized protein n=1 Tax=Xenopus laevis TaxID=8355 RepID=UPI00090E0E50) HSP 1 Score: 88.6 bits (218), Expect = 2.350e-21 Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0
Query: 34 MGSKALVNSHPKNFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVHATEIGFTK 87
MG + L SHP+ FG+G R CRVCSN+HGLIRKYGL MCRQCFR +A +IGFTK
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFTK 54
BLAST of mRNA_Ecto-sp13_S_contig1782.5412.1 vs. uniprot
Match: A0A368SFU2_SETIT (Uncharacterized protein n=1 Tax=Setaria italica TaxID=4555 RepID=A0A368SFU2_SETIT) HSP 1 Score: 89.4 bits (220), Expect = 2.440e-21 Identity = 44/73 (60.27%), Postives = 49/73 (67.12%), Query Frame = 0
Query: 15 GHTRRSALLPPPAALHLLTMGSKALVNSHPKNFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVHATEIGFTK 87
G T R LLP AA MG + NSHPKN+G G R CRVC+N HGLIRKYGL CRQCFR +A +IGF K
Sbjct: 32 GFTGRDFLLP--AAAAAAAMGHSNVWNSHPKNYGPGSRVCRVCANPHGLIRKYGLMCCRQCFRSNAKDIGFIK 102
BLAST of mRNA_Ecto-sp13_S_contig1782.5412.1 vs. uniprot
Match: A0A7J7QR56_9CHLO (40S ribosomal protein S29 (Fragment) n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QR56_9CHLO) HSP 1 Score: 87.8 bits (216), Expect = 2.610e-21 Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0
Query: 34 MGSKALVNSHPKNFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVHATEIGFTK 87
MG +A+ NSHPK++GKGGR CRVCSNQ G+IRKY L +CRQCFR +A +IGF K
Sbjct: 1 MGHEAVWNSHPKDYGKGGRKCRVCSNQGGIIRKYNLNICRQCFREYANDIGFIK 54 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1782.5412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig1782.5412.1 ID=prot_Ecto-sp13_S_contig1782.5412.1|Name=mRNA_Ecto-sp13_S_contig1782.5412.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bpback to top |