prot_Ecto-sp13_S_contig17807.5406.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17807.5406.1
Unique Nameprot_Ecto-sp13_S_contig17807.5406.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length94
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17807.5406.1 vs. uniprot
Match: A0A6H5L524_9PHAE (DHC_N2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L524_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 9.210e-31
Identity = 69/94 (73.40%), Postives = 72/94 (76.60%), Query Frame = 0 
Query:    1 GKAQLQKNVEKAKRRVEGNVDSTKMRIAEFIDSDARPREMSETASSISKELAGLKAQAVDIGEEEAKVEGHTSGTLVALAEKVIVSFQPYADLW 94
            GKAQLQKN                     FIDSDARPREMSETA+SISKELAGLKAQAVDIGEEEAKV+GHTSG LVALAEKVIVSFQPYAD+W
Sbjct: 1680 GKAQLQKNXXXXXXXXXXXXXXXXXXXXXFIDSDARPREMSETAASISKELAGLKAQAVDIGEEEAKVDGHTSGALVALAEKVIVSFQPYADIW 1773
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BLAST of mRNA_Ecto-sp13_S_contig17807.5406.1 vs. uniprot
Match: D7G491_ECTSI (Similar to Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3), partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G491_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 5.940e-30
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0 
Query:   30 FIDSDARPREMSETASSISKELAGLKAQAVDIGEEEAKVEGHTSGTLVALAEKVIVSFQPYADLW 94
            FIDSDARPREMSE A+SISKELAGLKAQAVDIGEEEAKV+GHTSGTLVALAEKVIVSFQPYADLW
Sbjct: 1522 FIDSDARPREMSENAASISKELAGLKAQAVDIGEEEAKVDGHTSGTLVALAEKVIVSFQPYADLW 1586
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17807.5406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L524_9PHAE9.210e-3173.40DHC_N2 domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G491_ECTSI5.940e-3095.38Similar to Dynein heavy chain 3, axonemal (Axonema... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17807contigEcto-sp13_S_contig17807:943..3246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17807.5406.1mRNA_Ecto-sp13_S_contig17807.5406.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17807 943..3246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17807.5406.1 ID=prot_Ecto-sp13_S_contig17807.5406.1|Name=mRNA_Ecto-sp13_S_contig17807.5406.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp
GKAQLQKNVEKAKRRVEGNVDSTKMRIAEFIDSDARPREMSETASSISKE
LAGLKAQAVDIGEEEAKVEGHTSGTLVALAEKVIVSFQPYADLW
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