prot_Ecto-sp13_S_contig17803.5405.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17803.5405.1
Unique Nameprot_Ecto-sp13_S_contig17803.5405.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length235
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17803.5405.1 vs. uniprot
Match: D7G049_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G049_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 9.410e-145
Identity = 207/228 (90.79%), Postives = 215/228 (94.30%), Query Frame = 0 
Query:    1 PPPLPQPACADAATSRSCTAATTAASPARRQASFDATVVGVGDLRTTAHTNAKQPLYNFLARCTGPDRRVGDAEYWRGLVEGWCEERGMGPVDLSTKQVSLFLRQMAEDPRLSRDYGVSMVKGCGALRFALEGRPFDWSRLDGDGGGSRLFHAGWRWMCVAPERDGCRTFTSCGRGANVEVEISKPSYAQVCEVAGIRVNGVDCTSFAAFKPALDVGSFSNPAGLCKV 228
            P P  +PACA AAT R CTAATTAASPARRQASFDATVVG+GDLRTTAHTNAKQPLYNFLAR TG DRRVGDAEYWRGLVEGWCEERG+GPVDLSTKQVSL+LRQMAEDPRLSR YGVSMVKGCGALRFALEGRPFDWSRLDGDGGGSRLFHAGWRW CVAPE+DGCRTF SCGRGANVEV I+KPSYAQVCEVAG+RVNGVDCTSFAAFKP LDVGSFSNPAGLCK+
Sbjct:  128 PSPALEPACAGAATCRCCTAATTAASPARRQASFDATVVGLGDLRTTAHTNAKQPLYNFLARYTGADRRVGDAEYWRGLVEGWCEERGLGPVDLSTKQVSLYLRQMAEDPRLSRYYGVSMVKGCGALRFALEGRPFDWSRLDGDGGGSRLFHAGWRWTCVAPEKDGCRTFASCGRGANVEVHITKPSYAQVCEVAGVRVNGVDCTSFAAFKPTLDVGSFSNPAGLCKM 355
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BLAST of mRNA_Ecto-sp13_S_contig17803.5405.1 vs. uniprot
Match: A0A6H5JH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH41_9PHAE)

HSP 1 Score: 427 bits (1098), Expect = 7.830e-144
Identity = 206/227 (90.75%), Postives = 218/227 (96.04%), Query Frame = 0 
Query:    2 PPLPQPACADAATSRSCTAATTAASPARRQASFDATVVGVGDLRTTAHTNAKQPLYNFLARCTGPDRRVGDAEYWRGLVEGWCEERGMGPVDLSTKQVSLFLRQMAEDPRLSRDYGVSMVKGCGALRFALEGRPFDWSRLDGDGGGSRLFHAGWRWMCVAPERDGCRTFTSCGRGANVEVEISKPSYAQVCEVAGIRVNGVDCTSFAAFKPALDVGSFSNPAGLCKV 228
            P L +P CADAAT RSCTAATTAA PARRQASFDATVVG+GD+RTTAHTNAKQ LYNFLARCTGPDRRVGDAEYWRGLVE W EERG+GPVDLSTKQVSL+LRQMAEDPRLSR YGVSMVKGCGALRFALEGRPFDWSRLDGDGGGSRLFHAGWRWMCVAPE+DGCRTF+SCG+GANVEV+I+KPSYAQVCEVAGIRVNGVDCTSFAAFKPALDVGSFS+PAGLCK+
Sbjct:  171 PALVEPVCADAATCRSCTAATTAAFPARRQASFDATVVGLGDVRTTAHTNAKQHLYNFLARCTGPDRRVGDAEYWRGLVEAWYEERGLGPVDLSTKQVSLYLRQMAEDPRLSRYYGVSMVKGCGALRFALEGRPFDWSRLDGDGGGSRLFHAGWRWMCVAPEKDGCRTFSSCGQGANVEVKITKPSYAQVCEVAGIRVNGVDCTSFAAFKPALDVGSFSDPAGLCKM 397
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BLAST of mRNA_Ecto-sp13_S_contig17803.5405.1 vs. uniprot
Match: D7FRZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ8_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 5.480e-11
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0 
Query:  176 GANVEVEISKPSYAQVCEVAGIRVNGVDCTSFAAFKPALDVGSFSNPAGLCKVWGS 231
            G +  + + + SY Q+CEV G+RV+GV CTSFAAFKPALDVGSFS P   CK  GS
Sbjct:   79 GPSSMLPVQQVSYVQMCEVEGVRVDGVGCTSFAAFKPALDVGSFSIPEDWCKSPGS 134
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17803.5405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G049_ECTSI9.410e-14590.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH41_9PHAE7.830e-14490.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRZ8_ECTSI5.480e-1160.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17803contigEcto-sp13_S_contig17803:1739..3371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17803.5405.1mRNA_Ecto-sp13_S_contig17803.5405.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17803 1739..3371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17803.5405.1 ID=prot_Ecto-sp13_S_contig17803.5405.1|Name=mRNA_Ecto-sp13_S_contig17803.5405.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=235bp
PPPLPQPACADAATSRSCTAATTAASPARRQASFDATVVGVGDLRTTAHT
NAKQPLYNFLARCTGPDRRVGDAEYWRGLVEGWCEERGMGPVDLSTKQVS
LFLRQMAEDPRLSRDYGVSMVKGCGALRFALEGRPFDWSRLDGDGGGSRL
FHAGWRWMCVAPERDGCRTFTSCGRGANVEVEISKPSYAQVCEVAGIRVN
GVDCTSFAAFKPALDVGSFSNPAGLCKVWGSKVL*
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