mRNA_Ecto-sp13_S_contig178.5400.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig178.5400.1
Unique NamemRNA_Ecto-sp13_S_contig178.5400.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig178.5400.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 2.210e-77
Identity = 202/370 (54.59%), Postives = 237/370 (64.05%), Query Frame = 1
Query:    7 CLDALIVALNETCDAGSWYTSTKELRLVSLEFCIACRSCQIIHLTVNAQVPRRLLAAVDAPPPHPKRLCGTRVARLGARRVTWNMPTSAELRNPVFAIADVNCLEFGHAFTGSLKAVAWPRRLKTIKFRQFYTFDMPIGLVEWPASLKRLAFGRAFNQPLERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-------------------------CSGSDEDWMMMYSNXXXXXXXXXXXXXXXXXXXGGIFRQSLQGLGTWMPNLEAVRVLDWEYH------SRDLRGIQWPKGLRELTVFKVSSLDGVVTPSTVQV 1023
            CL+ALIVALNETCD  SWYTSTKEL+L SL+FCIACR+CQ +HL V+ Q+PRRLLA+ DAPPPHPKRLC TRV RL +RRVTWNMPT+A+LR P+FA+ D+  LEFG AF  SL+AV WP  L+T++F     FD  I LV+WP  L+ + FG  FNQP+ER                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXX                          C     + M++++N                   G +FRQSLQGLGTWMPNLE + +L   YH      S  LR I+WPKGLR LT+ + +S+DGV  P  VQV
Sbjct:   51 CLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTFGGDFNQPIERVKFPASLQQLIFRTSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGNRLNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWCDEFAGNGMVIFANFDQPIGSSVGPALLRRLVLGHMFRQSLQGLGTWMPNLEVLHLL--HYHGSGLGDSNFLREIEWPKGLRHLTLLEGTSIDGVDIPLAVQV 418          
BLAST of mRNA_Ecto-sp13_S_contig178.5400.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 3.850e-68
Identity = 197/359 (54.87%), Postives = 231/359 (64.35%), Query Frame = 1
Query:    1 NSCLDALIVALNETCDAGSWYTSTKELRLVSLEFCIACRSCQIIHLTVNAQVPRRLLAAVDAPPPHPKRLCGTRVARLGARRVTWNMPTSAELRNPVFAIADVNCLEFGHAFTGSLKAVAWPRRLKTI---------KFRQFYTFDMPIGLVEWPASLKRLAFGRAFNQPLERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCSGSDEDWM---MMYSNXXXXXXXXXXXXXXXXXXXGGIFRQSLQGLGTWMPNLEAVRVLDWEYHSRD-------LRGIQWPKGLRELTVFKVSSLDGVVTPSTVQ 1020
            +SCL+A+IVALNET D  SWYTSTKE +L SLEFCIACR+ Q + L V+++ PRRLLAA DAPPPHPKRLCGTRV RL ARRVTW++PT+A LRN ++++ D + LEF  AF  SL+AVAWPRRLKT+         KF     FD PI  V WP +L++L FG   N     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             C G  ++ +   ++ S    X               G  FRQSLQ LGTWMPNLE   +L   +H  D       LRGI+WPKGLR+L V ++SSL GVV PSTV+
Sbjct:   10 DSCLNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLKTVEVSGIAEVAKFHDKSLFDQPIAGVVWPDTLEQLTFGLFLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEV--------------------------CFGVRQEVLGDVVVTSKFNRXIGASAWPKAMHRLTLGQNFRQSLQELGTWMPNLETFHLL---HHIHDSGTEDSFLRGIEWPKGLRQLAVCRLSSLAGVVIPSTVE 339          
BLAST of mRNA_Ecto-sp13_S_contig178.5400.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 1.220e-65
Identity = 104/158 (65.82%), Postives = 120/158 (75.95%), Query Frame = 1
Query:    1 NSCLDALIVALNETCDAGSWYTSTKELRLVSLEFCIACRSCQIIHLTVNAQVPRRLLAAVDAPPPHPKRLCGTRVARLGARRVTWNMPTSAELRNPVFAIADVNCLEFGHAFTGSLKAVAWPRRLKTIKFRQFYTFDMPIGLVEWPASLKRLAFGRAF 474
            N CL +LIVALNETCD  SWYTSTKEL+  SLEFCIACR+  I+HL V+ Q+PR LLAA DAPPPHPKRLC TRV RL AR VTWNM  +AEL NP+FAI DV+CLEFG  F GSL+AV WPRRLK I+F     F+ P+ L++WP SL+ L  G  F
Sbjct:   12 NPCLSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKWPESLQHLVLGGDF 169          
BLAST of mRNA_Ecto-sp13_S_contig178.5400.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 3.920e-61
Identity = 103/162 (63.58%), Postives = 122/162 (75.31%), Query Frame = 1
Query:    1 NSCLDALIVALNETCDAGSWYTSTKELRLVSLEFCIACRSCQIIHLTVNAQVPRRLLAAVDAPPPHPKRLCGTRVARLGARRVTWNMPTSAELRNPVFAIADVNCLEFGHAFTGSLKAVAWPRRLKTIKFRQFYTFDMPIGLVEWPASLKRLAFGRAFNQPL 486
            +SCL  L VALNETCD  SWYTSTKEL+L SLE C+ACR  Q +HLTV+A  PRRLLAA DAP PHPKRLCGTRV RL ARR TWN+PT++ +R  +FA  DV+ LEFG AF GSL A+ WPRRLKTI+FRQ    +  +  V WPASL+++  G  FNQP+
Sbjct:  134 SSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVSWPASLRKVCLGHDFNQPI 295          
BLAST of mRNA_Ecto-sp13_S_contig178.5400.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.760e-56
Identity = 98/152 (64.47%), Postives = 120/152 (78.95%), Query Frame = 1
Query:    1 NSCLDALIVALNETCDAGSWYTSTKELRLVSLEFCIACRSCQIIHLTVNAQVPRRLLAAVDAPPPHPKRLCGTRVARLGARRVTWNMPTSAELRNPVFAIADVNCLEFGHAFTGSLKAVAWPRRLKTIKFRQFYTFDMPIGLVEWPASLKRL 456
            N+CL+A+ VAL ET D  SWYTSTKEL+L SLEFC+ACR+ Q +HL V+ ++PR LLAA D PP HPKRL   RV RL AR VTWNMPT+AELR+P+FA+ D++ L+FG AF GSL+AV WPRRL++I F  F  F+ PI LV+WPASLKRL
Sbjct:   34 NTCLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPIDLVKWPASLKRL 185          
BLAST of mRNA_Ecto-sp13_S_contig178.5400.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 3.350e-49
Identity = 223/401 (55.61%), Postives = 246/401 (61.35%), Query Frame = 1
Query:   43 CDAGSWYTSTKELRLVSLEFCIACRSCQIIHLTVNAQVPRRLLAAVDAPPPHPKRLCGTRVARLGARRVTWNMPTSAELRNPVFAIADVNCLEFGHAFTGSLKAVAWPRRLKTIKFRQFYTFDMPIGLVEWPASLKRLAFGRA----------------------------------------------------------------FNQPLERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCSGSDE----DWMMMYSNXXXXXXXXXXXXXXXXXXXGGIFRQSLQGLGTWMPNLEAVRVLDWEYHSRD----LRGIQWPKGLRELTVFKVSSLDGVVTPSTVQVYR 1029
            CD   WYTSTKEL+  SLEFCIACR  Q + L V+ Q PR LLAAVDAP PH KR C TRV RL ARRV WNMPT+ EL++P+FA+ DV  L+FG AF GSL++VAWP+RLK I F     F+ PI  VE+P SL  L    A                                                                +      XXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      E    D  +M+S  XXXXXXXXXXXXXXX   G  FRQSLQGLGTW+PNLE    LD    S D    LRGI+WP GLR+L VF+ S LDGV+ PSTV+V R
Sbjct:    2 CDGKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGVEFPPSLLELRLSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYRSRXXXXXXXXXXXXXXXXXXXGEAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHESQGFDHAIMFSEFXXXXXXXXXXXXXXXLTLGHKFRQSLQGLGTWIPNLEIFHFLDHSNGSGDEDSLLRGIEWPTGLRQLAVFRDSRLDGVIIPSTVEVSR 402          
BLAST of mRNA_Ecto-sp13_S_contig178.5400.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 5.230e-49
Identity = 123/353 (34.84%), Postives = 161/353 (45.61%), Query Frame = 1
Query:    1 NSCLDALIVALNETCDAGSWYTSTKELRLVSLEFCIACRSCQIIHLTVNAQVPRRLLAAVDAPPPHPKRLCGTRVARLGARRVTWNMPTSAELRNPVFAIADVNCLEFGHAFTGSLKAVAWPRRLKTIKFRQFYTFDMPIGLVEWPAS---LKRL-----AFGRAFNQPLERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCSGSDEDWMMMYSNXXXXXXXXXXXXXXXXXXXGGIFRQSLQGLGTWMPNLEAVRVLDWEY----HSRDLRGIQWPKGLRELTVFKVSSLDGVVTPSTVQV 1023
            +SCL+AL++ALNETC+  SWYTSTKEL+L SLEFC+ACR+ Q +HL V+AQ+PRRLLA  DAPPPHP+ LC TRV RL ARRVTW M  +AEL  P+FA+ DV+CL+FG     SL+A+         K   F           W +     +RL        RA++   +R                                                                                    D D +++                      G  F+QSLQGLGTWMPNLE +R+ D+      +   L GI WP GLR+L V++ + +DGV  PSTV+V
Sbjct:  111 SSCLNALVIALNETCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPELLCRTRVPRLRARRVTWGMRKAAELSIPIFAMTDVDCLKFGET---SLEALRLWHGRDGWKRSSFSFLHYSTSRSVWSSGQHLCRRLNSVAVVIARAYDWICDRCRRKR-------------------------------------------------------------------------------DNDVLVLRPTHRQPWLAYVFASTPL----GDDFKQSLQGLGTWMPNLEVLRLFDFRDPDFGNDSLLLGIGWPTGLRQLAVYECTKMDGVTIPSTVEV 377          
BLAST of mRNA_Ecto-sp13_S_contig178.5400.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.440e-45
Identity = 90/146 (61.64%), Postives = 102/146 (69.86%), Query Frame = 1
Query:   19 LIVALNETCDAGSWYTSTKELRLVSLEFCIACRSCQIIHLTVNAQVPRRLLAAVDAPPPHPKRLCGTRVARLGARRVTWNMPTSAELRNPVFAIADVNCLEFGHAFTGSLKAVAWPRRLKTIKFRQFYTFDMPIGLVEWPASLKRL 456
            LI+ALNE CD   WYTSTKEL+L SLEFC+ACR  QI+ L V+AQ PR LLAAVDAPPPH KR C TRV RL ARRV WNMPT+ ELR  +FA+ DVNCL FG  F GSL+AV WP  LK I F     F+         ASL++L
Sbjct:   21 LILALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIFFSS-EFNQXXXXXXXXASLQKL 165          
BLAST of mRNA_Ecto-sp13_S_contig178.5400.1 vs. uniprot
Match: D7FUL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 9.840e-43
Identity = 85/166 (51.20%), Postives = 107/166 (64.46%), Query Frame = 1
Query:    1 NSCLDALIVALNETCDAGSWYTSTKELRLVSLEFCIACRSCQIIHLTVNAQVPRRLLAAVDAPPPHPKRLCGTRVARLGARRVTWNMPTSAELRNP--VFAIADVNCLEFGHAFTGSLKAVAWPRRLKTIKFRQFYTFDMPIGLVEWPASLKRLAFGRAFNQPLER 492
            +SCL+A++VAL+ETCD  SWYTSTKEL+L SL FC ACR+ Q +HL V+  +PRRLLAA DAPPP  +       A   +         S+ +  P  VFA+ DV+ LEFG  F G+L+AVAWPR LKTI    +  F  PI L+EWP SL+ L FG  F QP+ R
Sbjct:  134 SSCLNAIVVALSETCDGKSWYTSTKELQLASLGFCTACRNHQTVHLKVDEHIPRRLLAAADAPPPASEAAVSDTRAPTHSASCDVEHADSSGIEEPCTVFAMTDVDHLEFGWDFEGNLEAVAWPRWLKTIDLHPWSNFGKPIDLIEWPDSLQTLEFGWEFYQPIYR 299          
BLAST of mRNA_Ecto-sp13_S_contig178.5400.1 vs. uniprot
Match: A0A6H5K0U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0U4_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 6.410e-19
Identity = 52/125 (41.60%), Postives = 70/125 (56.00%), Query Frame = 1
Query:   10 LDALIVALNETCDAGS---WYTSTKELRLVSLEFCIACRSCQIIHLTVNAQVPRRLLAAVDAPPPHPKRLCGTRVARLGARRVTWNMPTSAELRNPVFAIADVNCLEFGHAFTGSLKAVAWPRRL 375
            LD +IV LN+ C  G    W+ STKEL+L SL+ C ACR    +HL VN   P RLLA  D+P    +   GTRV RL AR V+W++ ++  L + ++A+A      F  +    L AV WP  L
Sbjct:   30 LDVVIVVLNQACGDGGQKHWFASTKELQLASLQLCEACRDAAALHLRVNTSTPLRLLAPADSPSDGSEE--GTRVPRLRAREVSWDLTSADRLSSSIYALASAQVFTFSDSLNAVLDAVVWPTSL 152          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig178.5400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5JRF9_9PHAE2.210e-7754.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUA5_9PHAE3.850e-6854.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH81_ECTSI1.220e-6565.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPY7_9PHAE3.920e-6163.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZZ4_9PHAE1.760e-5664.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYF0_9PHAE3.350e-4955.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2S9_ECTSI5.230e-4934.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRK5_9PHAE1.440e-4561.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUL5_ECTSI9.840e-4351.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0U4_9PHAE6.410e-1941.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig178contigEcto-sp13_S_contig178:695..1741 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size1047
Hectar predicted targeting categoryother localisation
Exons1
Cds size1047
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462922.2392132-CDS-Ecto-sp13_S_contig178:694..17411681462922.2392132-CDS-Ecto-sp13_S_contig178:694..1741Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig178 695..1741 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig178.5400.1prot_Ecto-sp13_S_contig178.5400.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig178 695..1741 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig178.5400.1

>prot_Ecto-sp13_S_contig178.5400.1 ID=prot_Ecto-sp13_S_contig178.5400.1|Name=mRNA_Ecto-sp13_S_contig178.5400.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=349bp
NSCLDALIVALNETCDAGSWYTSTKELRLVSLEFCIACRSCQIIHLTVNA
QVPRRLLAAVDAPPPHPKRLCGTRVARLGARRVTWNMPTSAELRNPVFAI
ADVNCLEFGHAFTGSLKAVAWPRRLKTIKFRQFYTFDMPIGLVEWPASLK
RLAFGRAFNQPLERSNFPASVQELQLGDKFTHPIEDAPWPASLRRLVFGT
YFNKPIEGILWPDSLERLDFGERFNQPVDNVRWPASLEEITFGSCSGSDE
DWMMMYSNFNQQIGSSHWPASLRRLTVGGIFRQSLQGLGTWMPNLEAVRV
LDWEYHSRDLRGIQWPKGLRELTVFKVSSLDGVVTPSTVQVYRPHLKF*
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mRNA from alignment at Ecto-sp13_S_contig178:695..1741+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig178.5400.1 ID=mRNA_Ecto-sp13_S_contig178.5400.1|Name=mRNA_Ecto-sp13_S_contig178.5400.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1047bp|location=Sequence derived from alignment at Ecto-sp13_S_contig178:695..1741+ (Ectocarpus species13 EcNAP12_S_4_19m)
AACTCTTGCTTGGACGCCCTCATCGTTGCTTTGAACGAGACGTGCGATGC GGGGAGTTGGTACACGTCGACCAAGGAGCTGCGGCTGGTGTCCTTGGAGT TCTGCATCGCGTGCAGAAGCTGCCAGATCATCCACTTGACAGTGAACGCT CAGGTTCCACGTAGGCTACTGGCCGCCGTGGATGCTCCACCGCCGCACCC GAAACGGCTATGTGGTACACGGGTGGCGCGACTAGGAGCGCGGCGCGTGA CTTGGAACATGCCGACATCAGCGGAATTGAGAAACCCGGTCTTTGCAATA GCGGACGTGAACTGTCTGGAGTTCGGCCATGCCTTTACAGGCAGCCTTAA GGCCGTGGCATGGCCGCGACGGCTGAAAACCATCAAGTTTCGCCAGTTTT ACACTTTCGACATGCCTATCGGCCTGGTCGAATGGCCCGCATCTCTGAAG AGGCTTGCATTCGGAAGAGCGTTTAACCAGCCGCTCGAACGGAGCAATTT TCCGGCATCGGTCCAGGAACTTCAGCTTGGGGACAAGTTCACGCATCCCA TAGAAGATGCCCCATGGCCGGCATCCCTGCGACGGCTTGTTTTTGGAACA TACTTCAACAAGCCGATTGAGGGCATTTTATGGCCAGATTCGCTGGAGAG GCTCGATTTCGGAGAACGTTTCAACCAGCCTGTTGACAACGTGAGGTGGC CGGCGTCACTAGAAGAGATTACGTTTGGATCGTGCAGTGGTTCAGACGAA GATTGGATGATGATGTACTCGAACTTCAACCAGCAAATCGGCAGCAGTCA TTGGCCTGCATCGCTGCGGCGACTCACCGTAGGCGGAATATTCAGGCAGT CACTGCAAGGACTGGGCACTTGGATGCCTAACCTTGAAGCTGTACGTGTT CTTGACTGGGAGTATCATTCACGCGATCTTCGTGGAATCCAATGGCCTAA GGGCCTCCGCGAGCTGACCGTGTTTAAGGTATCGAGCTTAGATGGGGTCG TTACACCTTCAACTGTACAGGTCTATCGCCCACATCTGAAATTTTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig178:695..1741+

>mRNA_Ecto-sp13_S_contig178.5400.1 ID=mRNA_Ecto-sp13_S_contig178.5400.1|Name=mRNA_Ecto-sp13_S_contig178.5400.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1047bp|location=Sequence derived from alignment at Ecto-sp13_S_contig178:695..1741+ (Ectocarpus species13 EcNAP12_S_4_19m)
AACTCTTGCTTGGACGCCCTCATCGTTGCTTTGAACGAGACGTGCGATGC
GGGGAGTTGGTACACGTCGACCAAGGAGCTGCGGCTGGTGTCCTTGGAGT
TCTGCATCGCGTGCAGAAGCTGCCAGATCATCCACTTGACAGTGAACGCT
CAGGTTCCACGTAGGCTACTGGCCGCCGTGGATGCTCCACCGCCGCACCC
GAAACGGCTATGTGGTACACGGGTGGCGCGACTAGGAGCGCGGCGCGTGA
CTTGGAACATGCCGACATCAGCGGAATTGAGAAACCCGGTCTTTGCAATA
GCGGACGTGAACTGTCTGGAGTTCGGCCATGCCTTTACAGGCAGCCTTAA
GGCCGTGGCATGGCCGCGACGGCTGAAAACCATCAAGTTTCGCCAGTTTT
ACACTTTCGACATGCCTATCGGCCTGGTCGAATGGCCCGCATCTCTGAAG
AGGCTTGCATTCGGAAGAGCGTTTAACCAGCCGCTCGAACGGAGCAATTT
TCCGGCATCGGTCCAGGAACTTCAGCTTGGGGACAAGTTCACGCATCCCA
TAGAAGATGCCCCATGGCCGGCATCCCTGCGACGGCTTGTTTTTGGAACA
TACTTCAACAAGCCGATTGAGGGCATTTTATGGCCAGATTCGCTGGAGAG
GCTCGATTTCGGAGAACGTTTCAACCAGCCTGTTGACAACGTGAGGTGGC
CGGCGTCACTAGAAGAGATTACGTTTGGATCGTGCAGTGGTTCAGACGAA
GATTGGATGATGATGTACTCGAACTTCAACCAGCAAATCGGCAGCAGTCA
TTGGCCTGCATCGCTGCGGCGACTCACCGTAGGCGGAATATTCAGGCAGT
CACTGCAAGGACTGGGCACTTGGATGCCTAACCTTGAAGCTGTACGTGTT
CTTGACTGGGAGTATCATTCACGCGATCTTCGTGGAATCCAATGGCCTAA
GGGCCTCCGCGAGCTGACCGTGTTTAAGGTATCGAGCTTAGATGGGGTCG
TTACACCTTCAACTGTACAGGTCTATCGCCCACATCTGAAATTTTAG
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