prot_Ecto-sp13_S_contig1779.5396.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1779.5396.1
Unique Nameprot_Ecto-sp13_S_contig1779.5396.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length474
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1779.5396.1 vs. uniprot
Match: A0A6H5KHW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW8_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 7.750e-112
Identity = 269/342 (78.65%), Postives = 272/342 (79.53%), Query Frame = 0 
Query:   29 DGAASEPESTAQTERHSLPTVAVSGSEDPTAASPDLGTGAXXXXXXXXXXXXXXXXXXXXXXXXKTPAGDGGGSCEIGAVGXXXXXXXXXXXXXXXXXXXXGDXXXXDXXXXXDGXXXXXXXXXXXXXXXXXXXXXXXXXXX-SDETDDGXXHXGDNAVAAGDEEKATDGGAVDPDPSSKDQPGEHLSTKYTKEELMARHWGMNLMQMKRVKALLRMGVCEEDLEIADRLLKMGLNWSNDTPPTKEEQLLGYTSQQRQRMKALHILGLTEESFDRCRAVMLSSLGPSAFGYSADETAASAVSAEAEEGWTPGDKFRRRXXXXXXXXXXXXTGMLRMPTFSQS 369
            DGAA EPE+TAQTERH LPTVAVS SE PTAASPDLGTG XXXXXXXXXXXXXXXXXXXXXXXX           E  AVG                    GD    D  XXX  XX       XXXXXXXXXXXXXXXXX  SDETDD    X        DEEKATDG AVDPDPSSKDQP EHLSTKYTKEELMARHWGMNLMQMKRVKALLRMGVCEEDLEIADRLLKMGLNWSNDTPPTKEEQLLGYTSQQRQR+KALHILGLTEESFDRCRAVMLSSLGPSAFGYSADETAASAVSAEAEEGWTPGDKFRRRXXXXXXXXXXXXTG+LRMPTFS S
Sbjct:   26 DGAADEPETTAQTERHYLPTVAVSESEYPTAASPDLGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREAVGGAVLSCSDCGRDGVSGSDCGGDSGGCDGGXXXXXXXSGESAGCXXXXXXXXXXXXXXXXXAGSDETDDDGGXXXXXXXXXXDEEKATDGEAVDPDPSSKDQPEEHLSTKYTKEELMARHWGMNLMQMKRVKALLRMGVCEEDLEIADRLLKMGLNWSNDTPPTKEEQLLGYTSQQRQRVKALHILGLTEESFDRCRAVMLSSLGPSAFGYSADETAASAVSAEAEEGWTPGDKFRRRXXXXXXXXXXXXTGILRMPTFSHS 367
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BLAST of mRNA_Ecto-sp13_S_contig1779.5396.1 vs. uniprot
Match: D8LT43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT43_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 1.950e-80
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0 
Query:  224 MARHWGMNLMQMKRVKALLRMGVCEEDLEIADRLLKMGLNWSNDTPPTKEEQLLGYTSQQRQRMKALHILGLTEESFDRCRAVMLSSLGPSAFGYSADETAASAVSAEAEEGWTPGDKFRRRXXXXXXXXXXXXTGMLRMPTFSQS 369
            MARHWGMNLMQMKRVKALLRMGVCEEDLEIADRLLKMGLNWSNDTPPTKEEQLLGY SQQRQRMKALHILGLTEESFDRCRAVMLSSLGPSAFGYSADETAASAVSAEAEEGWTPGDKFRRRXXXXXXXXXXXXTG+LRMPTFSQS
Sbjct:    1 MARHWGMNLMQMKRVKALLRMGVCEEDLEIADRLLKMGLNWSNDTPPTKEEQLLGYNSQQRQRMKALHILGLTEESFDRCRAVMLSSLGPSAFGYSADETAASAVSAEAEEGWTPGDKFRRRXXXXXXXXXXXXTGILRMPTFSQS 146
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BLAST of mRNA_Ecto-sp13_S_contig1779.5396.1 vs. uniprot
Match: D7FYM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM0_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 7.550e-12
Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 0 
Query:  198 GAVDPD----PSSKDQPGEHLSTKYTKEELMARHWGMNLMQMKRVKALLRMGVCEEDLEIADRLLKMGLNWSNDTPPTKEEQLLGYTSQQRQRMKALHILGLTEESFDRCRAVMLSSLGPSAFGYSADETAA 325
            GA +P+    P S      H+ST Y K+++M +H+G+   Q  R +ALLR+GV +ED+ IA+RL+      +++TP +KEE LLG T  Q    KAL +LG++E   +  R+  L  LG    G  A E  A
Sbjct:   49 GAEEPEQNGRPFSPQMKSPHISTLYEKQDVMVKHFGVTQKQALRTQALLRLGVTDEDVRIAERLMGSRSEGADNTP-SKEEWLLGVTYAQMSFHKALQVLGISEAVVEEERSRRLGELGSGGRGGGASECGA 179
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1779.5396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KHW8_9PHAE7.750e-11278.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT43_ECTSI1.950e-8098.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FYM0_ECTSI7.550e-1238.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1779contigEcto-sp13_S_contig1779:11856..15146 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1779.5396.1mRNA_Ecto-sp13_S_contig1779.5396.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1779 11856..15271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1779.5396.1 ID=prot_Ecto-sp13_S_contig1779.5396.1|Name=mRNA_Ecto-sp13_S_contig1779.5396.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=474bp
MEQVIGGGGGGAENSTSVADAAAAAAATDGAASEPESTAQTERHSLPTVA
VSGSEDPTAASPDLGTGAGDPTPAAVAAAEGEAAAAAAKADAKTPAGDGG
GSCEIGAVGGGVLSVSDCGRGGVSGSDCGGDGGSGDGGDGDDGGGGGGGG
SGDGAGCGKGGGSEDGAGAGSDETDDGGGHGGDNAVAAGDEEKATDGGAV
DPDPSSKDQPGEHLSTKYTKEELMARHWGMNLMQMKRVKALLRMGVCEED
LEIADRLLKMGLNWSNDTPPTKEEQLLGYTSQQRQRMKALHILGLTEESF
DRCRAVMLSSLGPSAFGYSADETAASAVSAEAEEGWTPGDKFRRRAAPSG
GGGGHHHTGMLRMPTFSQSSHNHISSGNIGRQGDPQRVFSRGIVGSVGSN
ARGNRGGLGGLGMAGGNKARRASDSVTGGYHLPDINAGKKKPRGVGGGAV
AAGLPPLGSVVGSPVVSTRTDPG*
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