mRNA_Ecto-sp13_S_contig17783.5392.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17783.5392.1
Unique NamemRNA_Ecto-sp13_S_contig17783.5392.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17783.5392.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 554 bits (1427), Expect = 3.340e-193
Identity = 296/327 (90.52%), Postives = 300/327 (91.74%), Query Frame = -1
Query:    1 AAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAKLEMLGETLKISGHAPQRWLSLVRVMERIIRLWHVLRKVYANDGEEFPLEKDKNKDDILQLFSLLQPLAVITRDGQYGAVPMAAEMHMAFAELKKEVLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKILVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATGEGSQPPLKRLSTPATKARPRFASLARNRVRGDT 981
            AAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEA++EMLGETLKIS HAPQRWLSLVRV+ERIIRLWHVLRK                      LFSLLQPLAVITRDGQYGAVPM AEMHMAFAELKKE+LDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTK LVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARAT EG QPPLKRLSTPATKARPRFASLARNRVRGDT
Sbjct:  160 AAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRK----------------------LFSLLQPLAVITRDGQYGAVPMTAEMHMAFAELKKELLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKTLVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATAEGGQPPLKRLSTPATKARPRFASLARNRVRGDT 464          
BLAST of mRNA_Ecto-sp13_S_contig17783.5392.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 4.080e-158
Identity = 247/330 (74.85%), Postives = 278/330 (84.24%), Query Frame = -1
Query:    1 AFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAKLEMLGETLKISGHAPQRWLSLVRVMERIIRLWHVLRKVYANDGEEFPLEKDKNKDDILQLFSLLQPLAVITRDGQYGAVPMAAEMHMAFAELKKEVLDPDEPLKVFDIPATPVSPEAEQADEEVPKK----KKSLPHKMVEPAALRPVATKTRELLTKILVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATGEGSQPPLKRLSTPATKARPRFASLARNRVRGDT 978
            AFGTSADPQK KNKDAR VV L+IKAAAKVNQSPIFKQKFDEA+L+M GE LKI  HAPQRWLSLVRVMERIIRLWHVLRKVYANDG EFPL+K  NKD+ILQL+SLL+PLA ITRDGQYGAVPM+AEMHMAFAELK+E LDP  PLKVFDIP TP SP A Q+DEE+P      KK LPHK VEPAALRPVATKTRELL K LVEKLY R+WD++SADPSPFRNASVLLTPSYKD+ FL  HALTA D+QHL + +AHLAPT+D +V  KL+  WADI+ RAS+AARK+HS  ATG+  QPPLKR  +P+   +PRFASLAR+R R ++
Sbjct:  356 AFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKVFDIPPTPDSPAALQSDEELPVTVNTGKKPLPHKTVEPAALRPVATKTRELLGKALVEKLYARLWDEESADPSPFRNASVLLTPSYKDSKFLDGHALTAGDAQHLGEGRAHLAPTLDDDVQSKLDASWADIRKRASDAARKEHSKAATGQDGQPPLKRFCSPSGAPKPRFASLARHRARHES 685          
BLAST of mRNA_Ecto-sp13_S_contig17783.5392.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 5.660e-82
Identity = 149/295 (50.51%), Postives = 198/295 (67.12%), Query Frame = -1
Query:   91 FGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAKLEMLGETLKISGHAPQRWLSLVRVMERIIRLWHVLRKVYANDGEEFPLEKDKNKDDILQLFSLLQPLAVITRDGQYGAVPMAAEMHMAFAELKKEVLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKILVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATGEGS 975
            FGT  DPQKSKN +AR ++  +I     +N+S  FK KF++ ++++LG+ LKI   APQRWL+ VR +ER+IRLWHVLRK+Y++ G+ FPLE+  NK+ ILQLFSLLQ L+ +TRDGQYG  PM A++ M F ELK EVLDP +PLKVFDIP  P+  +     EE   +KK+LPHKMVEP  L PVA K R  L + LV +LY RVWD ++ DPS F +AS LLTP + + + L A  LTA +  +L      +APT   EV +KL+  W  IK  A +A +   +A++  EGS
Sbjct:   90 FGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLKVFDIP--PLGQDGLPDREE---QKKALPHKMVEPDDLHPVAKKARSKLGRALVSRLYGRVWDHNTLDPSFFCDASCLLTPPFSEGHHLSAMKLTAEEHAYLPAGSVVVAPTSYEEVKEKLDGVWTKIKQGAVKAVK---TAQSEAEGS 376          
BLAST of mRNA_Ecto-sp13_S_contig17783.5392.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 1.560e-76
Identity = 141/305 (46.23%), Postives = 193/305 (63.28%), Query Frame = -1
Query:   64 AFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAKLEMLGETLKISGHAPQRWLSLVRVMERIIRLWHVLRKVYANDGEEFPLEKDKNKDDILQLFSLLQPLAVITRDGQYGAVPMAAEMHMAFAELKKEVLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKILVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATGEGSQPPLKRLST 978
            A+G   DP KSKN  AR ++  ++K    +N+SP FK KF++ +++MLGE  K+  HAPQRWLSL R +ER IRLWHVLRK+Y+++G  FPLE+   KD ILQL+SLLQPL+ ITRDGQYG  PM A++ M F  L  +VLDP + LKVF +P     P  E    +  ++KK LP KMV P  L     KTR  + + LV + Y RVWD+++ DP  F +A+ LLTP + +   + A  L A D ++L       APT+D EV  KL++ W +IK RA EA +K+ +A ++G G+    KR  T
Sbjct:  373 AYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLKVFQVP-----PIGEDGLPDRGQQKKPLPFKMVPPEQLHAAVEKTRVEMRRALVSRFYGRVWDENTLDPPFFCHAACLLTPPFSEGLHVAAMKLAAGDDEYLPSTSTATAPTMDEEVTAKLDETWKEIKERAVEAVKKEQAAASSGPGAAGVFKRART 672          
BLAST of mRNA_Ecto-sp13_S_contig17783.5392.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 4.790e-74
Identity = 139/295 (47.12%), Postives = 188/295 (63.73%), Query Frame = -1
Query:   94 AFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAKLEMLGETLKISGHAPQRWLSLVRVMERIIRLWHVLRKVYANDGEEFPLEKDKNKDDILQLFSLLQPLAVITRDGQYGAVPMAAEMHMAFAELKKEVLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKILVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATGEG 978
            AFGT  DPQ SKN +AR ++  +I     +++S +   KF++ ++++LGE L I   APQRWL+LVR MER+IRLW V+RK+Y++ G+ FPLE+  NKD I QL+SLLQPL+ +TRDGQYG +PM A+++M F  LK  VL+    LKVFDIP     P  E    +  ++KK LPHKMV    L PVA K R  L + LV + Y RVWD    DPS F +A+ LLTP + + N+L A  LTA + ++L      +APT D +V +KL   W +I  RA  A +  H+ RA GEG
Sbjct:  121 AFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSNLT-AKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIP-----PLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWVEINKRAVTAVKTAHN-RAAGEG 408          
BLAST of mRNA_Ecto-sp13_S_contig17783.5392.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 1.250e-71
Identity = 143/308 (46.43%), Postives = 192/308 (62.34%), Query Frame = -1
Query:   64 AFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAKLEMLGETLKISGHAPQRWLSLVRVMERIIRLWHVLRKVYANDGEEFPLEKDKNKDDILQLFSLLQPLAVITRDGQYGAVPMAAEMHMAFAELKKEVLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKILVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATGEGS---QPPLKRLST 978
            AFGT  DPQ SKN +AR ++  +I     +++S +   KF++ ++++LGE L I   APQRWL+LVR MER+IRLW V+RK+Y++ G+ FPLE+  NKD I QL+SLLQPL+ +TRDGQYG +PM A+++M F  LK  VL+    LKVFDIP     P  E    +  ++KK LPHKMV    L PVA K R  L + LV + Y RVWD    DPS F +A+ LLTP + + N+  A  LTA + ++L      +APT D +V +KL   WA+IK RA  A +   + RA GEG      P KR  T
Sbjct:  250 AFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSNLT-AKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIP-----PLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYPSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWAEIKKRAITAVKTAQN-RAAGEGGGQGSDPFKRART 550          
BLAST of mRNA_Ecto-sp13_S_contig17783.5392.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 1.110e-70
Identity = 141/308 (45.78%), Postives = 190/308 (61.69%), Query Frame = -1
Query:   64 AFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAKLEMLGETLKISGHAPQRWLSLVRVMERIIRLWHVLRKVYANDGEEFPLEKDKNKDDILQLFSLLQPLAVITRDGQYGAVPMAAEMHMAFAELKKEVLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKILVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATGEGS---QPPLKRLST 978
            AFGT  DPQKSKN +A  ++  +I     +++S     KF++ ++++LGE LKI   APQRWL+LVR MER+IRLWHVLRK+Y++ G+ F LE+  NKD I QL+SLLQ L+ +TRDGQYG +PM A++++ F  LK  VL+    LKVFDIP     P  E    +  ++KK L HKMV    L PVA K R+ L + LV + Y  VWD    DPS F +A+ LLTP + + N+L A  LTA +  +L      +APT D +V +KL   WA+IK RA  A + + + R  GEG      P KR  T
Sbjct:  129 AFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLKVFDIP-----PLGEDGLPDRKEQKKPLRHKMVAHDELHPVAQKARDKLCRALVSRFYGHVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDDNLAAVSTVVAPTSDEDVREKLEGIWAEIKKRAVTAVKTEQN-RVAGEGGGQGSDPFKRART 430          
BLAST of mRNA_Ecto-sp13_S_contig17783.5392.1 vs. uniprot
Match: A0A6H5JGB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB7_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 2.110e-70
Identity = 143/300 (47.67%), Postives = 184/300 (61.33%), Query Frame = -1
Query:   13 QSPIFKQKFDEAKLEMLGETLKISGHAPQRWLSLVRVMERIIRLWHVLRKVYANDGEEFPLEKDKNKDDILQLFSLLQPLAVITRDGQYGAVPMAAEMHMAFAELKKEVLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKILVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATGEGS---QPPLKRLSTPATKARPR------FASLARNRV 885
            +S  FK KFD+ ++++LGE LKI   APQRWL+LVR +ER++RLW VLRK+Y++ G+ FPLE+  +KD ILQL+SLLQP   +TRDGQYG  PM A+++M F  LK  VL P E LKVFD+P     P  E    E  ++KK+LP KMV    L PVA K R  L + LV + Y RVWD  + DPS   +A+ LLTP + + N+L A  LTA   ++L       APT D EV +KL+  WA+IK RA  AA K   +RA G      + PLKR  T A  +  R      FAS  RN V
Sbjct:   67 KSSNFKAKFDDLQVDVLGEVLKIPDQAPQRWLTLVRTLERVVRLWRVLRKLYSDTGKTFPLEEGDDKDCILQLYSLLQPFPSVTRDGQYGGAPMLADIYMKFGMLKMRVLHPSEELKVFDVP-----PLGEDGLPE--EQKKALPQKMVAHDDLHPVAQKARNKLCRALVTRFYGRVWDTSTLDPSVLCDAACLLTPPFSEGNYLSAMKLTAEGCEYLPTGSCVTAPTPDEEVQKKLDGAWAEIKKRAV-AAVKTAQSRAAGXXXXXXKRPLKRARTSAAGSSRRKNREDAFASFGRNEV 358          
BLAST of mRNA_Ecto-sp13_S_contig17783.5392.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 1.640e-67
Identity = 133/297 (44.78%), Postives = 183/297 (61.62%), Query Frame = -1
Query:   94 AFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAKLEMLGETLKISGHAPQRWLSLVRVMERIIRLWHVLRKVYANDGEEFPLEKDKNKDDILQLFSLLQPLAVITRDGQYGAVPMAAEMHMAFAELKKEVLDPDEPLKVFDIPATPVS--PEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKILVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATGEG 978
            AFG   DP KSKN  AR V+ ++IK    +N+S   + KF++ + E+LGE LK+  HAPQRWLS+VR MERIIRLWH LRK+Y+++G+ FPLE+  NK+ +LQL+SLL+PL +ITRDGQYG  PM A+++M    LK  +L+ ++ LKV++ P    +  P+ E+ +       K LPHKMV    L P A K RE L + LV +L+ R W     DPS F ++S LLTP Y     + A  LT  +  +L      L PT D +V+ K  + W  IK RA +A  K+  A+A G G
Sbjct:   28 AFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSNLRAKFEDLETELLGEVLKVVKHAPQRWLSMVRTMERIIRLWHALRKLYSDEGKVFPLEEGDNKNGVLQLYSLLEPLCMITRDGQYGGAPMMADIYMKMGILKMGMLNLEKELKVYETPRVGENGLPDREEQN-------KPLPHKMVAHGNLHPAAKKAREELCRALVARLFGRYW-AGCVDPS-FVDSSCLLTPPYSSGIHISAMKLTEEEGDYLPTGLTVLTPTTDEDVEDKKAEAWGMIKKRAIQAV-KEDQAQANGSG 314          
BLAST of mRNA_Ecto-sp13_S_contig17783.5392.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.010e-64
Identity = 127/281 (45.20%), Postives = 169/281 (60.14%), Query Frame = -1
Query:  133 FGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAKLEMLGETLKISGHAPQRWLSLVRVMERIIRLWHVLRKVYANDGEEFPLEKDKNKDDILQLFSLLQPLAVITRDGQYGAVPMAAEMHMAFAELKKEVLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKILVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEA 975
            FGT  DPQKSKN  AR ++  +I     +++S  FK KF + ++++ GE       APQRWL+LV  +ER+IRLWHVLRK+Y++ G+ FPLE+    D ILQL SLLQPL+ +TRDGQYG  PM          LK  VLDP E LKVFDIP     P  E    +  ++KK+LPH MV    L PVA K R  L + L  + Y RVWD  + DPS   +A+ LLTP + + N+L A  LTA + ++L       APT+D EV +KL+  W   ++  S+A
Sbjct:   98 FGTHVDPQKSKNPKARDMLKKLINLVGTLHRSSNFKAKFGDLQVDVWGEVFP--NQAPQRWLTLVPTLERVIRLWHVLRKLYSDTGKTFPLEEGDITDCILQLNSLLQPLSSVTRDGQYGGAPM----------LKMRVLDPSEELKVFDIP-----PLGEDGLPDRKEQKKALPHHMVAHDYLDPVAQKERNELCRALGTRFYGRVWDTSTLDPSVLCDAACLLTPPFSEGNYLSAMKLTAEEGEYLPAGSCVTAPTLDEEVQEKLDGAWGKSRSEPSQA 361          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17783.5392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5KZ46_9PHAE3.340e-19390.52Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L1G0_9PHAE4.080e-15874.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEE6_9PHAE5.660e-8250.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJJ9_9PHAE1.560e-7646.23Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ66_9PHAE4.790e-7447.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0P1_9PHAE1.250e-7146.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB08_9PHAE1.110e-7045.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGB7_9PHAE2.110e-7047.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFQ8_9PHAE1.640e-6744.78Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JTT2_9PHAE1.010e-6445.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17783contigEcto-sp13_S_contig17783:921..1901 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size981
Hectar predicted targeting categoryother localisation
Exons1
Cds size981
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462921.784024-CDS-Ecto-sp13_S_contig17783:920..19011681462921.784024-CDS-Ecto-sp13_S_contig17783:920..1901Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17783 921..1901 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17783.5392.1prot_Ecto-sp13_S_contig17783.5392.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17783 921..1901 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17783.5392.1

>prot_Ecto-sp13_S_contig17783.5392.1 ID=prot_Ecto-sp13_S_contig17783.5392.1|Name=mRNA_Ecto-sp13_S_contig17783.5392.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=327bp
SIAADPVSCQGSKPRPGFRGRRGEALQRWLAALSGRTCRVFLPRSLRRPR
FDVRPAIVQFLVHLGVDGRGQVSFALVKVLRVCSRQSMRLEKVGVLVRRG
EEHGGVAEGRRVGAVLVPNPPVQLLHEDFGEQLPSLGGDGTQGSRLHHLV
RQRLLFLRDLLVRLLCFRGNRRRRDVEHLQRLVGVEHLLLEFGERHVHLC
RHRDCAVLPVPSYDGKRLEQREELEDVVFVFVLFQGKLLAIIGVDLPQDM
PQADDALHHADEAQPSLGRVPRDLQGLAQHLQLGLVELLLEDGRLVHLGG
SLDDERDHLARILVLRFLGVGRGAEGG
back to top

mRNA from alignment at Ecto-sp13_S_contig17783:921..1901+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17783.5392.1 ID=mRNA_Ecto-sp13_S_contig17783.5392.1|Name=mRNA_Ecto-sp13_S_contig17783.5392.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=981bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17783:921..1901+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGTATCGCCGCGGACCCTGTTTCGTGCCAGGGAAGCAAACCTAGGCCTGG CTTTCGTGGCCGGCGTGGAGAGGCGCTTCAGAGGTGGTTGGCTGCCCTCT CCGGTCGCACGTGCCGAGTGTTTCTTCCGCGCAGCCTCCGACGCCCTCGC TTTGATGTCCGCCCAGCAATCGTTCAGTTTCTGGTCCACCTCGGTGTCGA TGGTAGGGGCCAAGTGAGCTTTGCGTTGGTCAAGGTGCTGCGAGTCTGCA GCCGTCAAAGCATGCGCTTGGAGAAAGTTGGTGTCCTTGTAAGACGGGGT GAGGAGCACGGAGGCGTTGCGGAAGGGAGAAGGGTCGGCGCTGTCCTGGT CCCAAACCCTCCGGTACAGCTTCTCCACGAGGATTTTGGTGAGCAACTCC CGAGTCTTGGTGGCGACGGGACGCAAGGCAGCCGGCTCCACCATCTTGTG CGGCAGCGACTTCTTTTTCTTCGGGACCTCCTCGTCCGCCTGCTCTGCTT CCGGGGAAACCGGCGTCGCCGGGATGTCGAACACCTTCAGCGGCTCGTCG GGGTCGAGCACCTCCTTCTTGAGTTCGGCGAACGCCATGTGCATCTCTGC CGCCATCGGGACTGCGCCGTACTGCCCGTCCCTAGTTATGACGGCAAGAG GCTGGAGCAGCGAGAAGAGCTGGAGGATGTCGTCTTTGTTTTTGTCCTTT TCCAGGGGAAACTCCTCGCCATCATTGGCGTAGACCTTCCTCAAGACATG CCACAGGCGGATGATGCGCTCCATCACGCGGACGAGGCTCAGCCATCGCT GGGGCGCGTGCCCCGAGATCTTCAAGGTCTCGCCCAGCATCTCCAACTTG GCCTCGTCGAACTTCTGCTTGAAGATGGGCGACTGGTTCACCTTGGCGGC AGCCTTGATGATGAGCGAGACCACCTGGCGCGCATCCTTGTTCTTCGATT TCTGGGGGTCGGCCGAGGTGCCGAAGGCGGC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17783:921..1901+

>mRNA_Ecto-sp13_S_contig17783.5392.1 ID=mRNA_Ecto-sp13_S_contig17783.5392.1|Name=mRNA_Ecto-sp13_S_contig17783.5392.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=981bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17783:921..1901+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGTATCGCCGCGGACCCTGTTTCGTGCCAGGGAAGCAAACCTAGGCCTGG
CTTTCGTGGCCGGCGTGGAGAGGCGCTTCAGAGGTGGTTGGCTGCCCTCT
CCGGTCGCACGTGCCGAGTGTTTCTTCCGCGCAGCCTCCGACGCCCTCGC
TTTGATGTCCGCCCAGCAATCGTTCAGTTTCTGGTCCACCTCGGTGTCGA
TGGTAGGGGCCAAGTGAGCTTTGCGTTGGTCAAGGTGCTGCGAGTCTGCA
GCCGTCAAAGCATGCGCTTGGAGAAAGTTGGTGTCCTTGTAAGACGGGGT
GAGGAGCACGGAGGCGTTGCGGAAGGGAGAAGGGTCGGCGCTGTCCTGGT
CCCAAACCCTCCGGTACAGCTTCTCCACGAGGATTTTGGTGAGCAACTCC
CGAGTCTTGGTGGCGACGGGACGCAAGGCAGCCGGCTCCACCATCTTGTG
CGGCAGCGACTTCTTTTTCTTCGGGACCTCCTCGTCCGCCTGCTCTGCTT
CCGGGGAAACCGGCGTCGCCGGGATGTCGAACACCTTCAGCGGCTCGTCG
GGGTCGAGCACCTCCTTCTTGAGTTCGGCGAACGCCATGTGCATCTCTGC
CGCCATCGGGACTGCGCCGTACTGCCCGTCCCTAGTTATGACGGCAAGAG
GCTGGAGCAGCGAGAAGAGCTGGAGGATGTCGTCTTTGTTTTTGTCCTTT
TCCAGGGGAAACTCCTCGCCATCATTGGCGTAGACCTTCCTCAAGACATG
CCACAGGCGGATGATGCGCTCCATCACGCGGACGAGGCTCAGCCATCGCT
GGGGCGCGTGCCCCGAGATCTTCAAGGTCTCGCCCAGCATCTCCAACTTG
GCCTCGTCGAACTTCTGCTTGAAGATGGGCGACTGGTTCACCTTGGCGGC
AGCCTTGATGATGAGCGAGACCACCTGGCGCGCATCCTTGTTCTTCGATT
TCTGGGGGTCGGCCGAGGTGCCGAAGGCGGC
back to top