mRNA_Ecto-sp13_S_contig17782.5391.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17782.5391.1 vs. uniprot
Match: D7FVR9_ECTSI (Heme-binding family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR9_ECTSI) HSP 1 Score: 335 bits (859), Expect = 6.360e-112 Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 1
Query: 505 MEGIAENLYSIKNTARELTPQKLRQGLQTAAAETENIFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDADTARESDQRDDDNTGVTDGSGEGFNTLAGYLFGDNKQEVAMDMTTPVNIDVTSTGRTMSFVMPKDVPAEEAPTPRNPRVNVRDVAEGEVLAVREFPG 1023
MEGIAENLYSIK TARELTPQKLRQGLQTAAAETENIFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDAD ARESDQRDDD TGVTDGSGEGFNTLAGYLFGDNKQEVAMDMTTPVNIDVTSTGRTMSFVMPKDVPAEEAPTPRNPRVNVRDVAEGEVLAVREFPG
Sbjct: 1 MEGIAENLYSIKKTARELTPQKLRQGLQTAAAETENIFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDADAARESDQRDDDRTGVTDGSGEGFNTLAGYLFGDNKQEVAMDMTTPVNIDVTSTGRTMSFVMPKDVPAEEAPTPRNPRVNVRDVAEGEVLAVREFPG 173
BLAST of mRNA_Ecto-sp13_S_contig17782.5391.1 vs. uniprot
Match: A0A6V1RB38_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RB38_HETAK) HSP 1 Score: 125 bits (315), Expect = 9.180e-29 Identity = 96/279 (34.41%), Postives = 129/279 (46.24%), Query Frame = 1
Query: 205 PWGSLVETEIIATHLLKCLPEIARDVSDAARKNELVSGIVLGKGTEA----RSTVDGLKAVNRQLRQDILPKALEAAPRIASAVPRPGTNTTGSSTTPKRRTGQMEGIAENLYSIKNTARELTPQKLRQGLQTAAAETENIFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDADTARESDQRDDDNTGVTDGSGEGFNTLAGYLFGDNKQEVAMDMTTPVNID-VTSTGRTMSFVMPKDVPAEEAPTPR-NPRVNVRDVAEGEVLAVREFPG 1023
P SL E + + LLK PEI V DA ++ V ++ KG + AV RQ+ +DILP+ E PR+A + +RR G +Q+ E++NI+SRTP GL +P YS+ A FEIR Y +YA + MD ++ DD SG GFNTLAGYLFGDN+ E M+MT PV I GRTM+FV+P E AP P+ + + V G ++A EFPG
Sbjct: 61 PRASLSEKQTLLQDLLKQSPEIRDAVLDAIDQDS-VEKLLPPKGQSRFEPFAELIRATDAVRRQVVRDILPRVAEDGPRVAERLRAELXXXXADPEKARRRMGXXXXXXXXXXXX---------XXXXXAVQSIITESKNIYSRTPEGLETPKYSVVQATPAFEIRSYEAYATATTAMDG-----AESMDDPFE-----SGRGFNTLAGYLFGDNEAEEPMEMTIPVAISRAADGGRTMAFVLPSQYTPESAPAPKADANITVAQTKAGMMVAAVEFPG 319
BLAST of mRNA_Ecto-sp13_S_contig17782.5391.1 vs. uniprot
Match: A0A7S0DGY6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DGY6_9EUKA) HSP 1 Score: 119 bits (299), Expect = 1.700e-27 Identity = 90/258 (34.88%), Postives = 134/258 (51.94%), Query Frame = 1
Query: 265 EIARDVSDAA-RKNELVSG--IVLGKGTEARSTVDGLKAVNRQLRQDILPKALEAAPRIASAVPRPGTNTTGSSTTPKRRTGQMEGIAENLYSIKNTARELTPQKLRQGLQTAAAETENIFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDADTARESDQRDDDNTGVTDGSGEGFNTLAGYLFGDNKQEVAMDMTTPVNIDVTSTGRT-MSFVMPKDVPAEEAPTPR-NPRVNVRDVAEGEVLAVREFPG 1023
E R DAA R +L I+ KGTEAR VDGL AV RQ+ DI+P+ ++ R G SS+ P ++ + + P KL+Q + A E +N+F RTP+GL P+YS+ + +EIR Y Y + + M + + D V SG FNTLAGY+FG+N+++ AM MT PV + V G + M+FV+P + ++ +P P + + ++ V G++LAVREFPG
Sbjct: 28 ESLRSAVDAAIRDRDLKKSKDILYPKGTEARKLVDGLDAVRRQVVTDIIPEITKSGGR--------GLVPPQSSSAPSFNASKIISQLQEYQA--------DPNKLKQSITDAQEEAKNVFRRTPTGLEMPTYSVLVQGDDYEIREYEPYTIAATPMTSSS--------DVGMSVAK-SGNAFNTLAGYIFGNNQEKQAMSMTAPVEMTVGDKGASDMAFVLPSNF-SDSSPAPMADDDITIKKVP-GQILAVREFPG 258
BLAST of mRNA_Ecto-sp13_S_contig17782.5391.1 vs. uniprot
Match: A0A7S3E9Q7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E9Q7_9RHOD) HSP 1 Score: 116 bits (291), Expect = 3.780e-26 Identity = 82/226 (36.28%), Postives = 119/226 (52.65%), Query Frame = 1
Query: 346 RSTVDGLKAVNRQLRQDILPKALEAAPRIASAVPRPGTNTTGSSTTPKRRTGQMEGIAENLYSIKNTARELTPQKLRQGLQTAAAETENIFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDADTARESDQRDDDNTGVTDGSGEGFNTLAGYLFGDNKQEVAMDMTTPVNIDVTSTGRTMSFVMPKDVPAEEAPTPRNPRVNVRDVAEGEVLAVREFPG 1023
+S DG++ V Q+ DILP+ + AP IAS V + + +T PK +E I E +S N+A P+ LR+ E N+ +TP GL +P YS+ + E FE+R Y SY + M ++D S GFNTLAGY+FG N++ + MTTPV +D T TMSFV+P + AP P +P+V V++ A ++ A +EFPG
Sbjct: 81 KSGADGVRPVLNQIVNDILPELPDKAPVIASKVLKDLSELP--TTIPKA----VEDIRE--FSQTNSAE--LPELLRR-------EAMNVMKKTPEGLETPDYSVVLSTEHFEVREYGSYVIAETTMPG-------KQDYSEAEAVQASANGFNTLAGYIFGGNEEGEKISMTTPVVMDRTDDISTMSFVLPSKYSMDSAPPPNSPKVTVKETAT-QLFACKEFPG 281
BLAST of mRNA_Ecto-sp13_S_contig17782.5391.1 vs. uniprot
Match: A0A7S2G1D3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G1D3_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.110e-25 Identity = 101/326 (30.98%), Postives = 141/326 (43.25%), Query Frame = 1
Query: 58 AFVPSASTKHRGRXXXXXXXXXXXXXXXXXGDKTPSWRLEVDDLVKAASPWGSLVETEIIATHLLKCLPEIARDVSDAARKNELVSGIVLGKGTEARSTVDGLKAVNRQLRQDILPKALEAAPRIASAVPRPGTNTTGSSTTPKRRTGQMEGIAENLYSIKNTARELTPQKLRQGLQTAAAETEN-IFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDADTARESDQRDDDNTGVTD--GSGEGFNTLAGYLFGDNKQEVAMDMTTPVNIDVTSTG-RTMSFVMPKDVPAEEAPTPRNPRVNVRDVAEGEVLAVREFPG 1023
AF PS + HR ++T +W+ + + K SP S E +I+ L+ E+ D++ A +L + ++AR VDG +AV RQ+ DILP E APR+ PG K + AE + S P GL SP Y++ D ++ FEIR YA Y+ C+A M G D G+G FNTLA Y+FG+N + ++ MTTPV I ++ G + MSFV+P + A AP P +PRV V DV V AV EFPG
Sbjct: 23 AFAPSRANSHR------------FPTFLRVSEETLTWQ---EGIEKIFSPKSSQAERQILLQDLVARRTEVTDDITRAISNGTPEE--LLPQDSDARRAVDGARAVQRQVVDDILPAIAEEAPRV------PGNFV-------KNAPEIIASAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSSVPPGLQSPDYTVVDRQDAFEIRDYAPYSTCTAAM---------------AGSEDPFGAGASFNTLAEYIFGENDSKESLSMTTPVAISRSADGSQQMSFVLPGSLDASSAPAPISPRVIVSDVPTKRVAAV-EFPG 302
BLAST of mRNA_Ecto-sp13_S_contig17782.5391.1 vs. uniprot
Match: A0A4D9DAF2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAF2_9STRA) HSP 1 Score: 114 bits (285), Expect = 3.190e-24 Identity = 90/294 (30.61%), Postives = 140/294 (47.62%), Query Frame = 1
Query: 163 SWRLEVDDLVKAASPWGSLVETEIIATHLLKCLPEIARDVSDAARKNELVSGIVLGKGTEARSTVDGLKAVNRQLRQDILPKALEAAPRIASAVPRPGTNTTGSSTTPKRRTGQMEGIAENLY-SIKNTARELTPQKLRQGLQTAAAETENIFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDADTARESDQRDDDNTGVTDGSGEGFNTLAGYLFGDNKQEVAMDMTTPVNIDVTSTGR------TMSFVMPKDVPAEEAPTPRNPRVNVRDVAEGEVLAVREFPG 1023
SW+ ++ L+ SP + + +++ ++ PEI +DV +A R+ V G++ DG+KAV RQL +DI+P+ L + P A+ + +M +A+ Y ++ +EL + LR+ +E N+F RTP GL +PS+ + G+EIR Y Y V +M + A+ G +G FNTLAGY+FG N+ + M MTTPV I + R +M F+M E AP P + +V + A E LA REF G
Sbjct: 572 SWQESLELLM---SPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGS-VDGLL----------TDGIKAVRRQLTEDIIPQ-LASEPEQAAKI----------------LLEEMPKLAQRSYENLPKNPKELA-ETLREVSTALPSEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAESTGAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSKVRLTTTAR-ERLAAREFAG 832
BLAST of mRNA_Ecto-sp13_S_contig17782.5391.1 vs. uniprot
Match: A0A7S3Z1V0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z1V0_9EUKA) HSP 1 Score: 111 bits (277), Expect = 1.380e-23 Identity = 91/264 (34.47%), Postives = 129/264 (48.86%), Query Frame = 1
Query: 259 LPEIARDVSDAA---RKNELVSGIVLGKGTEARSTVDGLKAVNRQLRQDILPKAL------EAAPRIASAVPRPGTNTTGSSTTPKRRTGQMEGIAENLYSIKNTARELTPQKLRQGLQTAAAETENIFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDADTARESDQRDDDNTGVTDGSGEGFNTLAGYLFGDNKQEVAMDMTTPVNIDVTSTGRTMSFVMPKDVPAEEAPTPRNPRVNVRDVAEGEVLAVREFPG 1023
L + R ++AA R E I+ GTEAR VDGL AV RQ+R+ ILP+ E R ++PR + ++T K +G I E I+ A ++N+F RTP+GL P+Y++ + EGFEIR Y Y V + M D VTD SG+ FNTLA Y+FG N+++ AM MT PV + + + M+FV+P + +E+ PTP ++LAVREFPG
Sbjct: 137 LQDTLRSAAEAAIQKRDLEGAKNILYPTGTEARRVVDGLDAVQRQVRE-ILPELTKPDTLKELQTRTTDSLPRSFNPDSFNAT--KVISGLQSEIQELTQEIQ--AXXXXXXXXXXXXXXXXXXSKNVFRRTPTGLEMPNYTVLASGEGFEIREYDPYTVAATPMTTAAGAYGDALQS----VTD-SGKAFNTLASYIFGQNQEKTAMAMTAPVEMTLEPGVKEMAFVLPSEF-SEKTPTPEMEENITIKRMPSQILAVREFPG 389
BLAST of mRNA_Ecto-sp13_S_contig17782.5391.1 vs. uniprot
Match: A0A7S0TMQ6_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TMQ6_HEMAN) HSP 1 Score: 107 bits (266), Expect = 2.190e-22 Identity = 85/279 (30.47%), Postives = 130/279 (46.59%), Query Frame = 1
Query: 199 ASPWGSLVETEIIATHLLKCLPEIARDVSDAARKNELVSGIVLGKGTEARSTVDGLKAVNRQLRQDILPKALEAAPRIASAVPRPGTNTTGSSTTPKRRTGQMEG-IAENLYSIKNTARELT---PQKLRQGLQTAAAETENIFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDADTARESDQRDDDNTGVTDGSGEGFNTLAGYLFGDNKQEVAMDMTTPVNIDVTSTGRTMSFVMPKDVPAEEAPTPRNPRVNVRDVAEGEVLAVREFPG 1023
A+P+ + + + L+ +IA V+ + +LG + + + V RQLR DILP A E + R ++ S P+ + +++G + + L + + + T PQKL + + A E N+F TP GL P Y++ A FE+R Y ++ V M T T G FNTLAG+LFGDN Q++AM MTTPV ++ MSFV+PK+ + P PR+ V + +V AVREF G
Sbjct: 88 ANPFTPPQDKPALLSDLIGMREDIAASVTKVLNRESKPEEELLGP--IGKRQLKAQETVRRQLRDDILPSARETLEEL-----RERARSSDSRPDPQEQFRRLQGLVTDRLDELTASGKPPTLPEPQKLARDI---AQEVRNVFQSTPEGLEQPPYTVSVANPEFEVREYEAFTVARRDMVGVKP---------GTNRTFAEGSSFNTLAGFLFGDNDQDMAMAMTTPVFVERGGGEEAMSFVIPKEKEGD-VPVPRDKTVRIEEVPAAR-YAVREFAG 345
BLAST of mRNA_Ecto-sp13_S_contig17782.5391.1 vs. uniprot
Match: A0A6T7QSS0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A6T7QSS0_9CRYP) HSP 1 Score: 104 bits (259), Expect = 2.020e-21 Identity = 94/302 (31.13%), Postives = 133/302 (44.04%), Query Frame = 1
Query: 148 GDKTPSWRL----EVDDLV-KAASPWGSLVETEIIATHLLKCLPEIARDVSDAARKNELVSGIVLGKGTEARSTVDGLKAVNRQLRQDILPKALEAAPRIASAVPRPGTNTTGSSTTPKRRTGQMEGIAEN--LYSIKNTARELTPQKLRQG-LQTAAAETENIFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDADTARESDQRDDDNTGVTDGSGEGFNTLAGYLFGDNKQEVAMDMTTPVNIDVTSTGRT--MSFVMPKDVPAEEAPTPRNPRVNVRDVAEGEVLAVREFPG 1023
G + PS + E DL K A P+ S E +I L + ++++ VSD ++ G+ R + +AV RQ+ +DI+P A + A + V G G + G +N L +I + E + G ++ AE NIFS TP GL +PSYS+ + +EIR Y+ V S M A +R +D G FN LA +LFG N ++ AM MTTPV V GRT MSFV+P + P P E +A REFPG
Sbjct: 19 GSRLPSMKALEDEEWQDLAEKLADPFVSPFEKPMILAELARRREQVSQTVSDVLGGRRAQEALL---GSRGRKQLKAARAVARQVTEDIVPDARKQAEELLQEVRDKGV-------------GSLAGEIQNRILVAIDDATVEGMLKVPEAGSVEDIMAEVRNIFSETPEGLETPSYSVVRSSSEYEIRDYSPMLVASKAMSA-------ERQED--------GNAFNELASFLFGKNDRKEAMSMTTPVITAVDGEGRTRSMSFVIPSKYDLDSVPKPVGLSAVRMQQMEDSRVAAREFPG 289
BLAST of mRNA_Ecto-sp13_S_contig17782.5391.1 vs. uniprot
Match: A0A7S4KWM3_GUITH (Hypothetical protein (Fragment) n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KWM3_GUITH) HSP 1 Score: 103 bits (257), Expect = 3.190e-21 Identity = 80/279 (28.67%), Postives = 119/279 (42.65%), Query Frame = 1
Query: 193 KAASPWGSLVETEIIATHLLKCLPEIARDVSDAARKNELVSGIVLGKGTEARSTVDGLKAVNRQLRQDILPKALEAAPRIASAVPRPGTNTTGSSTTPKRRTGQMEGIAENLYSIKNTARELTPQKLRQGLQTAAAETENIFSRTPSGLYSPSYSLEDAREGFEIRRYASYAVCSAQMDADTARESDQRDDDNTGVTDGSGEGFNTLAGYLFGDNKQEVAMDMTTPVNIDVTSTGRT--MSFVMPKDVPAEEAPTPRNPRVNVRDVAEGEVLAVREFPG 1023
K A P+ S +E +I L + +++ VSD ++ G+ R + +AV RQ+ +DI+P+A A + V G + + + AE + + E N+FS TP GL +PSYS+ + + +E+R Y+S + S M T ++ D G FN LA +LFG N ++ AM MTTPV V GRT MSFV+P + P P P E +A REFPG
Sbjct: 15 KLADPFVSPLEKPMILAELARRRDQVSDTVSDVLGGRRSQEALL---GSRGRKQLRAARAVARQVTEDIVPEARRQAEELLEEVRGNGIEKIAADIQSRLLVAIDDATAEGMLKAPGVV----------SVDDIVTELRNVFSETPEGLETPSYSVVSSSDEYEVREYSSMLLASKDMS--TGKQED-------------GNAFNELASFLFGKNDRKEAMSMTTPVITSVDREGRTRSMSFVIPSKYNLDNVPRPLQPSDVTMSRMEAVRVAAREFPG 265 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17782.5391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17782.5391.1 >prot_Ecto-sp13_S_contig17782.5391.1 ID=prot_Ecto-sp13_S_contig17782.5391.1|Name=mRNA_Ecto-sp13_S_contig17782.5391.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=343bp MTALLPPLILTLLFIDRAAAFVPSASTKHRGRGGGLRLRSSRSSSSSSSGback to top mRNA from alignment at Ecto-sp13_S_contig17782:751..3589+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17782.5391.1 ID=mRNA_Ecto-sp13_S_contig17782.5391.1|Name=mRNA_Ecto-sp13_S_contig17782.5391.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2839bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17782:751..3589+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17782:751..3589+ >mRNA_Ecto-sp13_S_contig17782.5391.1 ID=mRNA_Ecto-sp13_S_contig17782.5391.1|Name=mRNA_Ecto-sp13_S_contig17782.5391.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17782:751..3589+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |