mRNA_Ecto-sp13_S_contig17768.5381.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17768.5381.1
Unique NamemRNA_Ecto-sp13_S_contig17768.5381.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17768.5381.1 vs. uniprot
Match: D7FIR7_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR7_ECTSI)

HSP 1 Score: 493 bits (1268), Expect = 2.840e-171
Identity = 282/323 (87.31%), Postives = 288/323 (89.16%), Query Frame = 1 
Query:    1 QLRDEFRRYIKTKVAQELIDFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLPLGTPSPGSSSADKTPSSSASPHTAAAATAATMRGEGRKKPVGSNDTPSTDSLRGLYVKSRSDPEGLAHSNNRGFGG--GGREPAIVKLFESSHSTAAAWTGQFADAASCAGQTHSNVNRLYRGGTGNWSSGGVPRVEIVEDSPAAAPARPGDPAVESATNPHRPRRTXXXXXXXXXVTTDPQSEASVVPERDATAQ 963
            QLRDEFRRYIKTKVAQEL+DFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLPLGTPSPGSSSADKTPSSSASPHTAAAA    MRGEG +KPVGS+DTPS DSLRGLYVKSRSDPEGLAHSN RGFGG  GGREP  VKL   SHSTAAAWTGQF  AAS AGQTHSNVNRLYRGGTGNWSS GVPR  IVEDSPAAAPARPGD AV+SAT+       XXXXXXXX      QSEASVVP+RD TAQ
Sbjct:   39 QLRDEFRRYIKTKVAQELVDFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLPLGTPSPGSSSADKTPSSSASPHTAAAAA---MRGEGSEKPVGSDDTPSIDSLRGLYVKSRSDPEGLAHSNKRGFGGSGGGREPGTVKLLGRSHSTAAAWTGQFTGAASRAGQTHSNVNRLYRGGTGNWSSEGVPRDGIVEDSPAAAPARPGDAAVDSATDXXXXXXXXXXXXXXX------QSEASVVPKRDVTAQ 352
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BLAST of mRNA_Ecto-sp13_S_contig17768.5381.1 vs. uniprot
Match: A0A6H5KAT5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE)

HSP 1 Score: 397 bits (1021), Expect = 1.400e-127
Identity = 289/606 (47.69%), Postives = 297/606 (49.01%), Query Frame = 1 
Query:    1 QLRDEFRRYIKTKVAQELIDFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGML-PLGTPSPGSSSADKTPSSSASPHTAAAATAATMRG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGRKKPVGSNDTPSTDSLRGLYVKSRSDPEGLAHSNNRGFGGG-----------GREPAIVKLF---------------------------ESSHSTAAAWTGQFADAASCAGQTHSNVNRLYRGGTGNWSSGGVPRVEIVEDSPAAAPARPGDPAVESATNPHRPRRTXXXXXXXXXVTTDPQSEASVVPERDATAQ 963
            QLRDEFRRYIKTKVAQELIDFYLDSLDREEVA FFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGML PLGTPSPGSS  DKTPSSSASPHTAAAA A  + G                                                                                                                                                                                                                                                      EG +KPVGS+DTPSTDSLRGLYVKSRSDP GLA SN RGFGG            GREPAIV+LF                           ESSHSTAAAWTGQFA AAS AGQT+SN NRLYRGGTGNWSSGGVPRVE VEDSPAAAPARPGDPAV+SATNPHRP++ XXXXXX     TDPQSEASVV ERD TAQ
Sbjct:  284 QLRDEFRRYIKTKVAQELIDFYLDSLDREEVADFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLLPLGTPSPGSSYEDKTPSSSASPHTAAAAAAMCVEGRKVPPPRSPGLVRAFRSLPYLVRNAKAASESWRRRAAGRSVGARVGGAATTVSIESGCGDGGTVQEGGRPEWSVGGASSAGGGARSEGEGKGVEEARLALGSKEEDAAAATGQRLAPKETDGAGPRAGAGAGGGSTAYRDVEMAERGGGDADDVAVSPGPLVRPWSGGDAARHGAGGASAVAGPCGGIGGGDRSHSREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLACSSSASLSEGSEKPVGSDDTPSTDSLRGLYVKSRSDPAGLARSNKRGFGGSDCYRESGGXXXGREPAIVELFGRSISDKSEAVPPAVLAAVEDDAATRKESSHSTAAAWTGQFAGAASRAGQTNSNANRLYRGGTGNWSSGGVPRVEFVEDSPAAAPARPGDPAVDSATNPHRPQQAXXXXXXGA---TDPQSEASVVLERDVTAQ 886
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BLAST of mRNA_Ecto-sp13_S_contig17768.5381.1 vs. uniprot
Match: D7FIS3_ECTSI (Similar to retinally abundant regulator of G-protein signaling hRGS-r n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS3_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 6.940e-63
Identity = 110/133 (82.71%), Postives = 122/133 (91.73%), Query Frame = 1 
Query:    1 QLRDEFRRYIKTKVAQELIDFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLPLGTPSP 399
            QLRDEFR+YIKTKVAQELIDFYLDSLDREEV GFFERQAATMRIV++YI+E A DQVN+S  CREKILATDVTA+DIFDEARAEVL VMETNF+R+FVTTEGFRRI +AS+ E RE+RLLRAGGMLP  +PSP
Sbjct:  131 QLRDEFRQYIKTKVAQELIDFYLDSLDREEVMGFFERQAATMRIVERYIREDAPDQVNISEECREKILATDVTAYDIFDEARAEVLVVMETNFQREFVTTEGFRRIADASEVEHREIRLLRAGGMLPSASPSP 263
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BLAST of mRNA_Ecto-sp13_S_contig17768.5381.1 vs. uniprot
Match: D7FU02_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU02_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 4.210e-58
Identity = 98/131 (74.81%), Postives = 113/131 (86.26%), Query Frame = 1 
Query:    1 QLRDEFRRYIKTKVAQELIDFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLPLGTP 393
            QLR EFRRYI+TKVAQEL+DFYLDSLDREE+  +F RQA TMRIV QYI+EGA DQVN+SG CRE+IL+TDVTA+DIFD AR EVL VMETNF+R+FV TEGFRRI++A++ EQRE RLLRAGG LP   P
Sbjct:   39 QLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFTRQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRENRLLRAGGFLPPDAP 169
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BLAST of mRNA_Ecto-sp13_S_contig17768.5381.1 vs. uniprot
Match: A0A6H5K0N5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N5_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 1.650e-56
Identity = 98/126 (77.78%), Postives = 115/126 (91.27%), Query Frame = 1 
Query:    1 QLRDEFRRYIKTKVAQELIDFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGML 378
            QLR EFRRY++T VAQEL+DFYLDSLDREE+ G+F RQAATMRIV+QYI+EG  DQVN+SG CRE+IL+TDVTA+DIFD ARAEVLAVMETNF+RDFV TEGFRRI++AS+ EQRE+RLLRA G+L
Sbjct:  203 QLRVEFRRYVETMVAQELVDFYLDSLDREEIKGYFARQAATMRIVEQYIREGGPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFVETEGFRRIVDASELEQREMRLLRAEGVL 328
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BLAST of mRNA_Ecto-sp13_S_contig17768.5381.1 vs. uniprot
Match: D7FU07_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU07_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 3.050e-55
Identity = 98/142 (69.01%), Postives = 118/142 (83.10%), Query Frame = 1 
Query:    1 QLRDEFRRYIKTKVAQELIDFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGML------PLGTPSPGSS 408
            QLRDEFR+YI+ KVAQEL+DFY++SLDREE+  +F RQAATMRIVDQYI+EGA +QVN+SG CRE+IL+TDVTA+DIFD ARAEVLA+METNF++DFV TEGFRRI +AS  EQ+E+RLLR  G L       L +P P SS
Sbjct:   49 QLRDEFRKYIEMKVAQELMDFYIESLDREEIKEYFPRQAATMRIVDQYIREGAAEQVNISGRCREEILSTDVTAYDIFDHARAEVLALMETNFQQDFVETEGFRRIADASALEQQEIRLLRKEGFLVADASPTLNSPPPASS 190
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BLAST of mRNA_Ecto-sp13_S_contig17768.5381.1 vs. uniprot
Match: D7FTZ7_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 5.760e-55
Identity = 95/126 (75.40%), Postives = 116/126 (92.06%), Query Frame = 1 
Query:    1 QLRDEFRRYIKTKVAQELIDFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGML 378
            QLR EFR+Y++T VAQEL+DFYLDSLDREE+ G+F RQAATMRIV+QYI+EG+ DQVN+SG CRE+IL+TDVTA+DIFD ARAEVLAVMETNF+RDF+ TEGFRRI++AS+ EQR++RLLRA G+L
Sbjct:  254 QLRVEFRKYVETMVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFIETEGFRRIVDASELEQRQMRLLRAEGVL 379
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BLAST of mRNA_Ecto-sp13_S_contig17768.5381.1 vs. uniprot
Match: A0A6H5JJQ0_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 1.090e-54
Identity = 99/131 (75.57%), Postives = 112/131 (85.50%), Query Frame = 1 
Query:    1 QLRDEFRRYIKTKVAQELIDFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLPLGTP 393
            QLR EFRRYI+TKVAQEL+DFYLDSLDREE+  +F RQA TMRIV QYI+EGA DQVN+SG CRE+IL+T VTA+DIFD AR EVL VMETNF+R+FV TEGFRRI+ AS+ EQRE RLLRAGG LP  TP
Sbjct:  322 QLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTHVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVEASELEQRENRLLRAGGFLPPDTP 452
[Close]
BLAST of mRNA_Ecto-sp13_S_contig17768.5381.1 vs. uniprot
Match: D7FTZ9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.750e-53
Identity = 96/131 (73.28%), Postives = 114/131 (87.02%), Query Frame = 1 
Query:    1 QLRDEFRRYIKTKVAQELIDFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLPLGTP 393
            QLRDEFR Y++TKVAQEL++FYLDSLDREE+ GFF RQAATMRIV +YI++GA +QVN+S ACRE+I++T+VTA+DIFD ARAEVLAVME  F+ +FV TEGFRRI NAS+ EQRE RLLRAGG LP  TP
Sbjct:  295 QLRDEFRGYMRTKVAQELVNFYLDSLDREEIHGFFGRQAATMRIVARYIRDGAPEQVNISEACREEIVSTNVTAYDIFDRARAEVLAVMEAEFKAEFVETEGFRRIANASELEQREKRLLRAGGFLPPSTP 425
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BLAST of mRNA_Ecto-sp13_S_contig17768.5381.1 vs. uniprot
Match: A0A6H5KDM3_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM3_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 7.280e-52
Identity = 111/204 (54.41%), Postives = 124/204 (60.78%), Query Frame = 1 
Query:    1 QLRDEFRRYIKTKVAQELIDFYLDSLDREEVAGFFERQ---------------------------------------------------------------------AATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLPLGTPSPGS 405
            QLRDEFR+YIKTKVAQEL+DFYLDSLDREEV GFFERQ                                                                     AATMRIV++YI+E A DQVN+S  CREKILATDVTA+DIFDEARAEVL VMETNF+R+FVTTEGFRRI +AS+ E RE+RLLRAGGMLP  +PSPGS
Sbjct:   93 QLRDEFRQYIKTKVAQELVDFYLDSLDREEVMGFFERQVVDGLVAVHAPELLQPSAETGDGVAVGSAVTPGPRRLPCPRHAFCSTIGHAHWRPGGLGDAERPTDMATAATMRIVERYIREDAPDQVNISEECREKILATDVTAYDIFDEARAEVLVVMETNFQREFVTTEGFRRIADASEVEHREIRLLRAGGMLPSASPSPGS 296
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17768.5381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7FIR7_ECTSI2.840e-17187.31RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAT5_9PHAE1.400e-12747.69RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FIS3_ECTSI6.940e-6382.71Similar to retinally abundant regulator of G-prote... [more]
D7FU02_ECTSI4.210e-5874.81Signal transducer, putative n=1 Tax=Ectocarpus sil... [more]
A0A6H5K0N5_9PHAE1.650e-5677.78RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FU07_ECTSI3.050e-5569.01Signal transducer, putative n=1 Tax=Ectocarpus sil... [more]
D7FTZ7_ECTSI5.760e-5575.40Similar to regulator of G-protein signaling 16 n=1... [more]
A0A6H5JJQ0_9PHAE1.090e-5475.57RGS domain-containing protein n=3 Tax=Ectocarpus T... [more]
D7FTZ9_ECTSI1.750e-5373.28RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KDM3_9PHAE7.280e-5254.41RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17768contigEcto-sp13_S_contig17768:2..3617 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score197.2
Seed ortholog evalue1.2e-47
Seed eggNOG ortholog2880.D7FTZ7
Preferred nameRGS1
Model size963
KEGG koko:K16449
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0003674,GO:0004888,GO:0004930,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005886,GO:0006950,GO:0007154,GO:0007165,GO:0007186,GO:0008047,GO:0008150,GO:0009414,GO:0009415,GO:0009628,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009746,GO:0009749,GO:0009756,GO:0009987,GO:0010008,GO:0010033,GO:0010035,GO:0010182,GO:0012505,GO:0016020,GO:0023052,GO:0030234,GO:0030695,GO:0031090,GO:0031410,GO:0031982,GO:0033993,GO:0034284,GO:0038023,GO:0042127,GO:0042221,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051336,GO:0051345,GO:0051716,GO:0060089,GO:0060589,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071322,GO:0071944,GO:0097305,GO:0097708,GO:0098588,GO:0098772,GO:0098805,GO:1901700,GO:1901701
Exons6
EggNOG free text desc.Regulator of G protein signaling domain
EggNOG OGs2CNEE@1,2QVMV@2759
Ec32 ortholog descriptionRGS domain
Ec32 orthologEc-20_003190.1
Cds size963
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17768.5381.1prot_Ecto-sp13_S_contig17768.5381.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17768 2..3617 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462920.8974142-CDS-Ecto-sp13_S_contig17768:1..1151681462920.8974142-CDS-Ecto-sp13_S_contig17768:1..115Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17768 2..115 +
1681462920.9140267-CDS-Ecto-sp13_S_contig17768:917..9711681462920.9140267-CDS-Ecto-sp13_S_contig17768:917..971Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17768 918..971 +
1681462920.9242601-CDS-Ecto-sp13_S_contig17768:1265..13671681462920.9242601-CDS-Ecto-sp13_S_contig17768:1265..1367Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17768 1266..1367 +
1681462920.9343367-CDS-Ecto-sp13_S_contig17768:2105..23301681462920.9343367-CDS-Ecto-sp13_S_contig17768:2105..2330Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17768 2106..2330 +
1681462920.9444442-CDS-Ecto-sp13_S_contig17768:3068..32161681462920.9444442-CDS-Ecto-sp13_S_contig17768:3068..3216Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17768 3069..3216 +
1681462920.9569032-CDS-Ecto-sp13_S_contig17768:3297..36171681462920.9569032-CDS-Ecto-sp13_S_contig17768:3297..3617Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17768 3298..3617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17768.5381.1

>prot_Ecto-sp13_S_contig17768.5381.1 ID=prot_Ecto-sp13_S_contig17768.5381.1|Name=mRNA_Ecto-sp13_S_contig17768.5381.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=321bp
QLRDEFRRYIKTKVAQELIDFYLDSLDREEVAGFFERQAATMRIVDQYIK
EGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTT
EGFRRILNASKQEQRELRLLRAGGMLPLGTPSPGSSSADKTPSSSASPHT
AAAATAATMRGEGRKKPVGSNDTPSTDSLRGLYVKSRSDPEGLAHSNNRG
FGGGGREPAIVKLFESSHSTAAAWTGQFADAASCAGQTHSNVNRLYRGGT
GNWSSGGVPRVEIVEDSPAAAPARPGDPAVESATNPHRPRRTAAAAAAAA
AVTTDPQSEASVVPERDATAQ
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mRNA from alignment at Ecto-sp13_S_contig17768:2..3617+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17768.5381.1 ID=mRNA_Ecto-sp13_S_contig17768.5381.1|Name=mRNA_Ecto-sp13_S_contig17768.5381.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3616bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17768:2..3617+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCTGCGGGACGAGTTCCGGCGGTACATCAAGACCAAGGTGGCCCAGGA
ATTAATAGACTTCTACCTGGACTCGCTAGACCGGGAAGAAGTGGCGGGCT
TCTTCGAGAGACAGGTAGGTACAAATTAAGGGAGGGGAGTTATCGCAGCA
CCGTTCCTAATAGTGCCGTTCCGAATAAAGCGTTCTCGATGCCTGGGTTG
ATTGGGTTCGTCGCGGAGATAATTGCGGGTGACTTGGAAGCCGATTCGGA
TCTTCGTGGGGCGGGGCGAGATGCAGCGCATTTGTGTTTTTGATGGTTGG
TTGGTTGATTTGCTGGTTGGTGCGTCTTGTTTTGTCTGATGGAGTTCTGT
CGTGGACGTCATAACGGAAGGGAATCAGAAAGCTTTGGCAAGGAGGTAAG
CAGAAAGGCTATCTCGTAGTCAGACCAGGCCAAGACGAAACTGTTTGTGT
TGACGGTTTCCAGGAGGAGCAACCCCCAACATCGAATCCAGTCATACGTA
CGCACGCATGTGTGTGCTACTTGTGGTGTGGTGCACGTCAATTTTTTACT
CGCTCGATGGAGCAGCACCAAGAGCCCCGGCTAGCGTCGGCGGAAGACTG
TCCAATAGGGGCGGAGGTTCGATGTGGCGCCGATCGCGTTTTCCCTGTCC
TTCCTCTTGTAGGCTGATTGTGCGACCTTTCCCTCCGCCCCCCTCTCCCC
CAGCAGCCAGCAGCATCTTGAAGGGAGCACGAAAGGTGGATAAGCTGTTG
GTTGCAATCCTTTTCGCAGGGTTGCACACACCTGATACACTTCGTTACGA
TTGAGGTGTTCTCGACGGTTCCATTTTTTTTGTGTGTGTCTTCTTGTTAC
CTGTCCGTGTTTTCGCTCGCTTCGTCATCTGTCTCTTGCCGCTTTTTTTG
TTGTTTTTTTCCTCAGGCGGCCACCATGCGCATCGTGGACCAGTACATTA
AGGAGGGAGCCAGAGACCAGGTACGAGCTGCCCACCCCGGACGAATCTGG
CGTTTGCGGACGGGGTTCTAGAAGCGGGAAGGCGATATGTAACCTTGCAC
AATCTGCAGGCTAGCTGTACCATGCTTTTTTTTGCCATGGTTTTCGCCCA
TATTCTGACCTGAGGCTTATTTCACAGTGGTAAAATGAAAACCAGAATGT
GACGAGGTGGTTTACTCGAGGACTTCTTAGCATGTGTGACAATAGCTTCG
TGTACGGTTGACGTATGGATAGATGTTTGTTGAATGATTTTGCCCGCGTG
CGGGATCGCCCCAGGTCAATGTATCGGGAGCATGCCGAGAGAAAATTCTC
GCGACGGATGTTACCGCGTTCGACATCTTCGACGAGGCGAGGGCGGAGGT
CTTGGCAGTAATGGAGGTGATGACTAACAACACGAAAGCGTTCGTGGATA
ACTTACAGACAGATCAGCACGGTGTCTCATGGTTTTCTACCCCTAGAATC
TCATGGTTTTTAATGTTTAACAGCAGCTGTCACTTTGTGTGCTGTTGTGC
CTCCTGTGGGTTTTGAGACAAGCCCCCTCCCGGCCTCGGTGTTTGGCGCG
AGTATTGCGTGGGCTGCGCACGTAGGGTTGGACACACAAATAAAGTAGGT
GTGTGTGGCATGCGCCCACGTTTTTGACGTGCGGATACCCGTACCTTTTA
GACCTGTCTTGGCGGGAGCTTAACTTGCGCGTTTTGGGTCGCGCTCTCCC
CGCTGTAATACTCTTCCCCCCCCCCCCCCCCCTCGCTCTCTGTTTCATGA
GTTTGCCAGCCATCCGGGCCGCGGCTTGCATGATAAACCTTTGCCTGAAA
CGAGACGGATTTTGACCGTCGAGCGAGTCGCGTCAATACCTGAGACACGT
TTGTGACGGCGGTTTCACTTTAAAGGTTTTCCTTTCTGCCACCTCCATAT
GTCTTCGGACGAAACACTACCTGTACCGCACAGGAGATACTATTTTTTGG
CAGGCGCGCGTTGCTCGTGGTCTTCAGCCCCCAAACGCGCTCATACGGGA
TCATTCTCCGTCACACACACACACCCCGTTATCAGCACGGACCACATGCT
TTTGTAATGAAACCACGCTCCCTTGCTCGCGATCGACGCCAACACGAAAA
ACAGACCAACTTTCGGAGAGACTTCGTGACGACGGAAGGGTTCCGCCGCA
TTCTGAACGCTTCCAAGCAAGAGCAGCGGGAGCTGCGGCTCCTCCGCGCG
GGGGGCATGCTGCCCCTGGGAACCCCTTCCCCCGGGTCGTCATCGGCGGA
CAAGACGCCCTCCTCGTCGGCCTCTCCGCACACCGCCGCCGCCGCCACCG
CCGCCACCATGCGCGGCGAGGGAAGGAAGGTGCCGCCGCCCCGGTACCCG
CTTATCCCTGGCCTCGTGGGGGCCCTCAGGAGCCTCCCGTACCTGGTGAG
GAACGCGAAGGCCGCCTCCGGGTCACGGCGGCGCAGGGCGTCGGGTCGGA
GCGTGGGCGCGCGCGTCGGCGGGGCCGCGACGAGAGTCTCGGTCGAGTCC
GGCTGCGGCGACGGTGGGACGAGCCAGGAGGGTGGTCTTTCGGAAGGGTC
GGTCGGAGGAGCGAGTTCCGCCGGCGGTGCTGCTCGCGATGAGGGGGAGG
GGAAGGGCGACGAGGAGGCCGGGGTTGCCCTGGGGGGCAAGGGGGAGGAC
GTGGCGGCAGCGGCGGGGAAGGGTCTGGCCCCGAAGGAAAACGACGGTGC
CGGGCCCGGTGACGGTGCTGGTGGCGGAAGCACCGCGTTCCGGGAGGTGG
AATTGGCGGAGCGGAGGGCGGGAGACACTGACGATGTCGCCGTGGTCTGG
CCGCGGTCGAGTGGCGACGCTGCTCGCTATGGTACCGGTGGCGCGAGCGG
GGTGGCGGGCCCTCGTGGCGGGATAGGCGGCGGCGATCGGTCTCACGGCC
GGGAGGGTGGTGTTCACAGCGGCGATGACGGCGGCGGCGGCAGCAGCAGC
GGGAAGCTGCTGGCGGCCGCCGCCACCGACCAAGGCCGCAAGACTCGCCG
CGGCAGCTCGGCGGGAGCCTCCTCGTTGGCGTTTTCTGCCTCGGCGTCGC
TGTCCGAGGGCAGCGAGAAACCGGTGGGCTCAAACGACACCCCCAGCACC
GACAGCCTGCGCGGGTTGTACGTCAAGTCTCGGTCCGACCCCGAAGGGCT
AGCGCATAGTAACAATAGAGGATTTGGCGGCGGCGGCCGAGAACCAGCAA
TAGTTAAGCTGTTTGGTAGGAGCTTTAGCGGCAAGTCTGAGGCCGTCCCG
CCCGCGGTACTGGCAGCAGTCGAAGATGACGCGGCAACGCGAAAAGAAAG
CAGCCACAGCACAGCAGCAGCGTGGACGGGACAGTTCGCGGACGCTGCGT
CCTGTGCGGGGCAGACGCACTCTAACGTCAACCGCTTGTATCGCGGAGGG
ACCGGCAACTGGAGCAGCGGAGGAGTTCCACGCGTTGAAATCGTGGAGGA
CAGCCCCGCGGCGGCCCCGGCAAGACCAGGCGACCCTGCCGTCGAGTCCG
CCACGAACCCCCACCGACCACGACGAACCGCCGCCGCCGCCGCTGCCGCC
GCCGCCGTTACCACCGATCCGCAGAGCGAGGCGAGCGTCGTTCCAGAGCG
GGATGCTACCGCGCAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17768:2..3617+

>mRNA_Ecto-sp13_S_contig17768.5381.1 ID=mRNA_Ecto-sp13_S_contig17768.5381.1|Name=mRNA_Ecto-sp13_S_contig17768.5381.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=963bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17768:2..3617+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCTGCGGGACGAGTTCCGGCGGTACATCAAGACCAAGGTGGCCCAGGA
ATTAATAGACTTCTACCTGGACTCGCTAGACCGGGAAGAAGTGGCGGGCT
TCTTCGAGAGACAGGCGGCCACCATGCGCATCGTGGACCAGTACATTAAG
GAGGGAGCCAGAGACCAGGTCAATGTATCGGGAGCATGCCGAGAGAAAAT
TCTCGCGACGGATGTTACCGCGTTCGACATCTTCGACGAGGCGAGGGCGG
AGGTCTTGGCAGTAATGGAGACCAACTTTCGGAGAGACTTCGTGACGACG
GAAGGGTTCCGCCGCATTCTGAACGCTTCCAAGCAAGAGCAGCGGGAGCT
GCGGCTCCTCCGCGCGGGGGGCATGCTGCCCCTGGGAACCCCTTCCCCCG
GGTCGTCATCGGCGGACAAGACGCCCTCCTCGTCGGCCTCTCCGCACACC
GCCGCCGCCGCCACCGCCGCCACCATGCGCGGCGAGGGAAGGAAGAAACC
GGTGGGCTCAAACGACACCCCCAGCACCGACAGCCTGCGCGGGTTGTACG
TCAAGTCTCGGTCCGACCCCGAAGGGCTAGCGCATAGTAACAATAGAGGA
TTTGGCGGCGGCGGCCGAGAACCAGCAATAGTTAAGCTGTTTGAAAGCAG
CCACAGCACAGCAGCAGCGTGGACGGGACAGTTCGCGGACGCTGCGTCCT
GTGCGGGGCAGACGCACTCTAACGTCAACCGCTTGTATCGCGGAGGGACC
GGCAACTGGAGCAGCGGAGGAGTTCCACGCGTTGAAATCGTGGAGGACAG
CCCCGCGGCGGCCCCGGCAAGACCAGGCGACCCTGCCGTCGAGTCCGCCA
CGAACCCCCACCGACCACGACGAACCGCCGCCGCCGCCGCTGCCGCCGCC
GCCGTTACCACCGATCCGCAGAGCGAGGCGAGCGTCGTTCCAGAGCGGGA
TGCTACCGCGCAA
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