prot_Ecto-sp13_S_contig17723.5367.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17723.5367.1
Unique Nameprot_Ecto-sp13_S_contig17723.5367.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length129
Homology
BLAST of mRNA_Ecto-sp13_S_contig17723.5367.1 vs. uniprot
Match: D8LN26_ECTSI (HA2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN26_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 7.230e-90
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
Query:    1 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 128
            MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG
Sbjct:  129 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 256          
BLAST of mRNA_Ecto-sp13_S_contig17723.5367.1 vs. uniprot
Match: A0A6H5LEZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEZ0_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 1.450e-81
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
Query:    1 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 128
            MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG
Sbjct: 1173 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 1300          
BLAST of mRNA_Ecto-sp13_S_contig17723.5367.1 vs. uniprot
Match: A0A835YV72_9STRA (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV72_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.100e-77
Identity = 120/128 (93.75%), Postives = 127/128 (99.22%), Query Frame = 0
Query:    1 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 128
            MDI++AGRNYNKVRRAIVSGYFTHAAKKDP+EGY TMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRN+MTIEPKWLVELAPQFY++ADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKR+G
Sbjct: 1201 MDIVSAGRNYNKVRRAIVSGYFTHAAKKDPKEGYMTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNVMTIEPKWLVELAPQFYQAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRRG 1328          
BLAST of mRNA_Ecto-sp13_S_contig17723.5367.1 vs. uniprot
Match: A0A7S2Y0U7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0U7_9STRA)

HSP 1 Score: 233 bits (593), Expect = 3.780e-75
Identity = 105/127 (82.68%), Postives = 121/127 (95.28%), Query Frame = 0
Query:    1 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRK 127
            MDI+TAGRNYNKVR+AI +GYFTHAAKKDPQEGYRTM+EG  VYIHPSSALFNK+PEWVLYHELVLTTKEYMRN++ IEPKWLVELAPQFY+++DPN +++ KRMQ+IEPLYDRFNPP+SWRLS+RK
Sbjct:  138 MDIVTAGRNYNKVRKAICAGYFTHAAKKDPQEGYRTMLEGTIVYIHPSSALFNKNPEWVLYHELVLTTKEYMRNLLAIEPKWLVELAPQFYRASDPNYLSKAKRMQRIEPLYDRFNPPDSWRLSRRK 264          
BLAST of mRNA_Ecto-sp13_S_contig17723.5367.1 vs. uniprot
Match: A0A7R9UAC0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAC0_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.720e-71
Identity = 107/128 (83.59%), Postives = 123/128 (96.09%), Query Frame = 0
Query:    1 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 128
            MDIL+AGRNY K++RAIV+GYFT+AAKKDPQEGYRTMVEGN VYIHPSSALFNKSPEWVLYHE+VLTTKEYMRNIM+IEPKWLVELAP FY+ ADP K+TRQKRM++IEPL+DR+NPP+SWRLS+R+G
Sbjct:  669 MDILSAGRNYQKIQRAIVAGYFTNAAKKDPQEGYRTMVEGNVVYIHPSSALFNKSPEWVLYHEVVLTTKEYMRNIMSIEPKWLVELAPNFYRKADPTKLTRQKRMERIEPLFDRYNPPDSWRLSRRRG 796          
BLAST of mRNA_Ecto-sp13_S_contig17723.5367.1 vs. uniprot
Match: A0A7S2D0M5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0M5_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.620e-69
Identity = 94/117 (80.34%), Postives = 112/117 (95.73%), Query Frame = 0
Query:    1 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNP 117
            MDI++AGRN+ KV+R++ +GYFT+AAKKDPQEGY+TM+EGNPVYIHPSSALFNK+PEW++YHELV+TTKEYMR +M+IEPKWLVELAPQFYKSADPN+MT+ KRM KIEPLYDRFNP
Sbjct:   24 MDIVSAGRNFKKVQRSVTAGYFTNAAKKDPQEGYKTMIEGNPVYIHPSSALFNKNPEWLIYHELVMTTKEYMRAVMSIEPKWLVELAPQFYKSADPNRMTKAKRMMKIEPLYDRFNP 140          
BLAST of mRNA_Ecto-sp13_S_contig17723.5367.1 vs. uniprot
Match: K3WHT1_GLOUD (RNA helicase n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WHT1_GLOUD)

HSP 1 Score: 230 bits (587), Expect = 2.920e-68
Identity = 103/128 (80.47%), Postives = 119/128 (92.97%), Query Frame = 0
Query:    1 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 128
            MD+++ G+N+NKVRRAIV+GYF + AKKDPQEGYRTMVEG PVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTI+PKWLVELAP F+K  DP K+T++KR +KIEPLYDRFNPP++WRLSKR+G
Sbjct:  820 MDVVSCGKNFNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIDPKWLVELAPAFFKKGDPTKLTKRKRNEKIEPLYDRFNPPDAWRLSKRRG 947          
BLAST of mRNA_Ecto-sp13_S_contig17723.5367.1 vs. uniprot
Match: A0A5D6YAG5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAG5_9STRA)

HSP 1 Score: 231 bits (589), Expect = 4.410e-68
Identity = 105/128 (82.03%), Postives = 118/128 (92.19%), Query Frame = 0
Query:    1 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 128
            MD+++ G+N NKVRRAIV+GYF + AKKDPQEGYRTMVEG PVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAP F+K  DP K+T++KR +KIEPLYDRFNPP+SWRLSKR+G
Sbjct:  994 MDVVSCGKNLNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLTKRKRNEKIEPLYDRFNPPDSWRLSKRRG 1121          
BLAST of mRNA_Ecto-sp13_S_contig17723.5367.1 vs. uniprot
Match: G4YNN0_PHYSP (RNA helicase n=22 Tax=Phytophthora TaxID=4783 RepID=G4YNN0_PHYSP)

HSP 1 Score: 231 bits (589), Expect = 5.120e-68
Identity = 104/128 (81.25%), Postives = 119/128 (92.97%), Query Frame = 0
Query:    1 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 128
            MD+++ G+N+NKVRRAIV+GYF + AKKDPQEGYRTMVEG PVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAP F+K  DP K++++KR +KIEPLYDRFNPP+SWRLSKR+G
Sbjct: 1038 MDVVSCGKNFNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEPLYDRFNPPDSWRLSKRRG 1165          
BLAST of mRNA_Ecto-sp13_S_contig17723.5367.1 vs. uniprot
Match: M4B3A8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3A8_HYAAE)

HSP 1 Score: 231 bits (589), Expect = 5.400e-68
Identity = 104/128 (81.25%), Postives = 119/128 (92.97%), Query Frame = 0
Query:    1 MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 128
            MD+++ G+N+NKVRRAIV+GYF + AKKDPQEGYRTMVEG PVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAP F+K  DP K++++KR +KIEPLYDRFNPP+SWRLSKR+G
Sbjct: 1057 MDVVSCGKNFNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEPLYDRFNPPDSWRLSKRRG 1184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17723.5367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN26_ECTSI7.230e-90100.00HA2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LEZ0_9PHAE1.450e-81100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YV72_9STRA1.100e-7793.75Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
A0A7S2Y0U7_9STRA3.780e-7582.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9UAC0_9STRA2.720e-7183.59Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2D0M5_9STRA2.620e-6980.34Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
K3WHT1_GLOUD2.920e-6880.47RNA helicase n=2 Tax=Pythiaceae TaxID=4782 RepID=K... [more]
A0A5D6YAG5_9STRA4.410e-6882.03Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
G4YNN0_PHYSP5.120e-6881.25RNA helicase n=22 Tax=Phytophthora TaxID=4783 RepI... [more]
M4B3A8_HYAAE5.400e-6881.25Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011709Domain of unknown function DUF1605PFAMPF07717OB_NTP_bindcoord: 13..89
e-value: 1.3E-24
score: 86.3
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 1..127
NoneNo IPR availablePANTHERPTHR18934:SF120coord: 1..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17723contigEcto-sp13_S_contig17723:1290..2063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17723.5367.1mRNA_Ecto-sp13_S_contig17723.5367.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17723 1287..2063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17723.5367.1 ID=prot_Ecto-sp13_S_contig17723.5367.1|Name=mRNA_Ecto-sp13_S_contig17723.5367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp
MDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSA
LFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMT
RQKRMQKIEPLYDRFNPPNSWRLSKRKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011709DUF1605