mRNA_Ecto-sp13_S_contig1772.5366.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1772.5366.1 vs. uniprot
Match: D7FGY6_ECTSI (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY6_ECTSI) HSP 1 Score: 369 bits (948), Expect = 4.900e-117 Identity = 189/201 (94.03%), Postives = 195/201 (97.01%), Query Frame = 1
Query: 7 MAVTVIGGASGGISSLLANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFIVGLIGGMLYVFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGKCAGVLYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPELQPGLRCLDTPVLSVG 609
M VTVIGGASGGISSLL N+RLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAF+VGLIGG+LY+FASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSG CAG+LYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIR+SKEQEMAGMD SKHGGQTYPELQPGLR DTPVLSVG
Sbjct: 1 MTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPELQPGLRGPDTPVLSVG 201
BLAST of mRNA_Ecto-sp13_S_contig1772.5366.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE) HSP 1 Score: 377 bits (969), Expect = 3.410e-116 Identity = 192/206 (93.20%), Postives = 199/206 (96.60%), Query Frame = 1
Query: 1 QVMAVTVIGGASGGISSLLANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFIVGLIGGMLYVFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGKCAGVLYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPELQPGLRCLDTPVLSVGAGE 618
+VMAVTVI GASGGISSL+ANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAF+VGLIGGMLYVFASALLLK HLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSG+CAGVLYGG+GSSL A+I+FLMAVV WVG LTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPE Q GLRCLDTPVLSVGAGE
Sbjct: 258 RVMAVTVISGASGGISSLVANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGMLYVFASALLLKLHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGRCAGVLYGGSGSSLAANIIFLMAVVVWVGLLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPEFQSGLRCLDTPVLSVGAGE 463
BLAST of mRNA_Ecto-sp13_S_contig1772.5366.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI) HSP 1 Score: 314 bits (805), Expect = 1.370e-92 Identity = 158/205 (77.07%), Postives = 178/205 (86.83%), Query Frame = 1
Query: 1 QVMAVTVIGGASGGISSLLANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFIVGLIGGMLYVFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGKCAGVLYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPELQPGLRCLDTPVLSVGAG 615
+VM VTVIGGASGGI+SLL NK CGYWDTGSALNGIL GLVS+TAG+ TYEPEGAF+VG++GG+LY FAS LLL+ HLDDVVNA PVHLFGGMWGLV+AG F+SKF YA AYSEDRS CAG+LYGG+G +L A+IVFLMAV+AWVG LTLLLFVVTKLTIGIRVSK+QE+AGMD SKHGGQT+PEL P R +D P S GAG
Sbjct: 258 KVMGVTVIGGASGGITSLLVNKLQCGYWDTGSALNGILTGLVSITAGSGTYEPEGAFVVGVLGGVLYFFASNLLLRNHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFAYAMAYSEDRSDTCAGILYGGSGGTLAANIVFLMAVLAWVGLLTLLLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPELLPRRRTVDRPGSSFGAG 462
BLAST of mRNA_Ecto-sp13_S_contig1772.5366.1 vs. uniprot
Match: A0A7S2V0D8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0D8_9STRA) HSP 1 Score: 195 bits (495), Expect = 3.890e-53 Identity = 104/191 (54.45%), Postives = 133/191 (69.63%), Query Frame = 1
Query: 1 QVMAVTVIGGASGGISSLLANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFIVGLIGGMLYVFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGKCAGVLYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPELQPG 573
+ M T I A+ I+++ K L G D G A NG+LAGLVS+TA +T EGAFI+G+IGG++Y AS +L KF +DDVV+AVPVH+F GMWG++AAG FAS+ YA+AY DR+ C G YG G++ GA++ F+ AV+AWV +LLLF K T+GIRVS E E AGMD SKHGGQTYPE G
Sbjct: 6 RTMVTTAIAAATAAITTVSLGKALTGVIDIGLANNGVLAGLVSITAPCSTCTGEGAFIIGIIGGLVYYGASKMLHKFKIDDVVDAVPVHMFCGMWGVIAAGLFASEENYASAYYGDRAADCCGAFYGCGGAAFGANLGFVFAVIAWVIGTSLLLFFGIKFTVGIRVSIEVEEAGMDSSKHGGQTYPEQAKG 196
BLAST of mRNA_Ecto-sp13_S_contig1772.5366.1 vs. uniprot
Match: D7G242_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G242_ECTSI) HSP 1 Score: 203 bits (517), Expect = 5.410e-53 Identity = 97/188 (51.60%), Postives = 134/188 (71.28%), Query Frame = 1
Query: 1 QVMAVTVIGGASGGISSLLANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFIVGLIGGMLYVFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGKCAGVLYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPEL 564
+VM +T I A G I++ + K GYWD+G+A NG+LAGLV +TAG +T EPE A ++G++ +Y ++S L+LK +DDVV+AVP+H F G+WG++A FA+K YA YS +R+ KCAG YGG+GS+L +VFL+A++AW + LF+ K TIGIRVS+E E GMD SKHGGQTYPE+
Sbjct: 275 KVMVITTISAAFGAITNSVIGKVRLGYWDSGAANNGLLAGLVGITAGCSTCEPEAAMVIGIVAAFVYTYSSKLMLKLQIDDVVDAVPIHFFCGVWGVIAVSLFATKDNYANVYSAERADKCAGAFYGGDGSTLAVGLVFLLALIAWTVVTCMALFLGIKYTIGIRVSQEVEQIGMDDSKHGGQTYPEM 462
BLAST of mRNA_Ecto-sp13_S_contig1772.5366.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.790e-52 Identity = 97/191 (50.79%), Postives = 133/191 (69.63%), Query Frame = 1
Query: 1 QVMAVTVIGGASGGISSLLANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFIVGLIGGMLYVFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGKCAGVLYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPELQPG 573
+ M T I A G ++++L K GYWD G+A NG+LAGLV VTAG +T EPEGA ++G+I G +Y ++S +L+ +DDVV+A+PVH F G WG+ AA FA+K Y+AAY DR KCAG YGG+G+++ A++VF++AV+AWV + LF+ +G+RV KE E GMD SKHGGQTYPE+ G
Sbjct: 273 KTMVTTTISAAFGAVTTVLLGKLNLGYWDAGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYSAAYYGDRVDKCAGAFYGGDGNAVAANVVFILAVIAWVSATCMALFLGINAVVGMRVDKEMEQIGMDDSKHGGQTYPEMVKG 463
BLAST of mRNA_Ecto-sp13_S_contig1772.5366.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI) HSP 1 Score: 196 bits (498), Expect = 1.540e-50 Identity = 98/191 (51.31%), Postives = 132/191 (69.11%), Query Frame = 1
Query: 1 QVMAVTVIGGASGGISSLLANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFIVGLIGGMLYVFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGKCAGVLYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPELQPG 573
+ M T I A G ++++L K G+WD G+A NG+LAGLV VTAG +T EPEGA ++G+I G +Y ++S +L+ +DDVV+A+PVH F G WG+ AA FA+K Y AY DR+ KCAG YGG G+++GA+ VF++AV AWV LF+ K+T+G+RV KE E GMD SKHGGQTYPE+ G
Sbjct: 269 KTMVTTTISAAFGAVTTVLLGKFNLGHWDGGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYGMAY-YDRADKCAGAFYGGAGNAVGANFVFILAVTAWVVATCTALFMGIKMTVGMRVDKEMEQIGMDDSKHGGQTYPEMMKG 458
BLAST of mRNA_Ecto-sp13_S_contig1772.5366.1 vs. uniprot
Match: A0A835ZB85_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB85_9STRA) HSP 1 Score: 181 bits (460), Expect = 3.330e-45 Identity = 98/202 (48.51%), Postives = 123/202 (60.89%), Query Frame = 1
Query: 1 QVMAVTVIGGASGGISSLLANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFIVGLIGGMLYVFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGKCAGVLYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPELQPGLRCLDTPVLSV 606
+ M + + GA GG+SS L + L G+ D +A NGIL+G V++TAG+ +PEGA ++G I G++Y S LLLK +DDVVNA PVHLF GMWG+ A G A Y Y EDRSG C G YG GS LGA IVF++ +AW G + L+F V K T+G+RVSKE E GMD SKHGG G LD S
Sbjct: 278 KTMINSTLSGAIGGLSSTLVAQVLDGFIDPAAANNGILSGFVAITAGSGVAQPEGAILIGFIAGIIYQATSKLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEPNNYGRVYYEDRSGICCGAFYGCGGSQLGAQIVFILVNLAWTGVTSALMFTVAKYTVGLRVSKEIEELGMDTSKHGGMADYVHHVGESSLDNSRTSA 479
BLAST of mRNA_Ecto-sp13_S_contig1772.5366.1 vs. uniprot
Match: A0A7S1UFZ4_9STRA (Ammonium transporter n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFZ4_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.440e-44 Identity = 91/189 (48.15%), Postives = 129/189 (68.25%), Query Frame = 1
Query: 1 QVMAVTVIGGASGGISSLLANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFIVGLIGGMLYVFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGKCAGVLYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPELQ 567
+VM V+ IG A+ G SS++ +K + D G+ALNG+L GLVS+T A EP GAFI+GLIGG++Y ++ LL +DD VNA PVH+F GMWG++AAG FA++ Y+ AY DR+ CAG+ YGGNGS+LGA+I F++ ++ WVG T ++F K +R++ EQ+ GMD +HGG + E Q
Sbjct: 280 KVMVVSTIGAAAAGFSSVIFHKFMHNTVDLGAALNGVLGGLVSITGACAVIEPYGAFIIGLIGGVVYQLSAMLLESLKIDDCVNAAPVHMFCGMWGVIAAGLFATEQNYSNAYYSDRAEDCAGIFYGGNGSTLGANICFMICIILWVGATTSVMFGSLKAAGLLRLTDEQQATGMDILEHGGPAWVEFQ 468
BLAST of mRNA_Ecto-sp13_S_contig1772.5366.1 vs. uniprot
Match: A0A835ZI90_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI90_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.500e-44 Identity = 97/210 (46.19%), Postives = 128/210 (60.95%), Query Frame = 1
Query: 1 QVMAVTVIGGASGGISSLLANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFIVGLIGGMLYVFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGKCAGVLYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPELQPGLRCLDTP---VLSVGAGEL 621
+VM + + GA GG+SS L + GY D +A NGIL+G V++T + +PEGA ++G I G++Y AS LLLK +DDVVNA PVHLF GMWG+ A G A + Y AY EDR+ C G YG G+ L A IVF++ +AW G + ++F V K T+G+RVSKE E GMD SKHGG G + LD + VGA E+
Sbjct: 283 KVMINSTLSGAIGGLSSTLVALLMNGYIDPAAANNGILSGFVAITGPSGVVQPEGALLIGFIAGLIYQGASNLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEEHNYGRAYYEDRADICCGAFYGCGGNQLAAQIVFILVNLAWTGVTSAIMFTVAKYTVGLRVSKEVEEMGMDSSKHGGLADYAHTEGNKSLDNSRNGLFPVGADEI 492 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1772.5366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1772.5366.1 >prot_Ecto-sp13_S_contig1772.5366.1 ID=prot_Ecto-sp13_S_contig1772.5366.1|Name=mRNA_Ecto-sp13_S_contig1772.5366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=206bp MAVTVIGGASGGISSLLANKRLCGYWDTGSALNGILAGLVSVTAGAATYEback to top mRNA from alignment at Ecto-sp13_S_contig1772:10708..15677- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1772.5366.1 ID=mRNA_Ecto-sp13_S_contig1772.5366.1|Name=mRNA_Ecto-sp13_S_contig1772.5366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4970bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1772:10708..15677- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1772:10708..15677- >mRNA_Ecto-sp13_S_contig1772.5366.1 ID=mRNA_Ecto-sp13_S_contig1772.5366.1|Name=mRNA_Ecto-sp13_S_contig1772.5366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=618bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1772:10708..15677- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |