prot_Ecto-sp13_S_contig17718.5362.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17718.5362.1
Unique Nameprot_Ecto-sp13_S_contig17718.5362.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length73
Homology
BLAST of mRNA_Ecto-sp13_S_contig17718.5362.1 vs. uniprot
Match: D7FTF5_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTF5_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 1.980e-39
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0
Query:    1 MAFRATQVVRMMVKKTSTGLVGLAVDVNARANFIALQKQILEKIKIIPDHAQYRKDVEAISGYRLKVATETED 73
            MAFRATQ VRM+VKKTSTGLVGLAVDVNARANFIALQKQILEKIK+IPDHAQYRKDVEAISGYRLKVATETED
Sbjct:    1 MAFRATQAVRMVVKKTSTGLVGLAVDVNARANFIALQKQILEKIKVIPDHAQYRKDVEAISGYRLKVATETED 73          
BLAST of mRNA_Ecto-sp13_S_contig17718.5362.1 vs. uniprot
Match: A0A7S2BEJ1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BEJ1_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.240e-18
Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    2 AFRATQVVRMMVKKTSTGLVGLAVDVNARANFIALQKQILEKIKIIPDHAQYRKDVEAISGYRLKVATETED 73
            A R T+ V   V KTSTGLVGL VD+N RAN IA+Q+Q+LE +K IP+ A YR+ VEA + YRLKVATE  D
Sbjct:    7 ALRLTRPVAQAVHKTSTGLVGLKVDLNGRANLIAMQQQLLEAVKAIPETAAYRQSVEATATYRLKVATEETD 78          
BLAST of mRNA_Ecto-sp13_S_contig17718.5362.1 vs. uniprot
Match: A0A835Z296_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z296_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 8.020e-18
Identity = 45/64 (70.31%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    4 RATQVVRMMVKKTSTGLVGLAVDVNARANFIALQKQILEKIKIIPDHAQYRKDVEAISGYRLKV 67
            RAT V R   KKTSTGLVGL VD NAR N    Q  ILEKIKIIP+H  YRK VEAIS YRLKV
Sbjct:   13 RATPVAREAWKKTSTGLVGLPVDPNARVNLAQKQNDILEKIKIIPEHTGYRKAVEAISKYRLKV 76          
BLAST of mRNA_Ecto-sp13_S_contig17718.5362.1 vs. uniprot
Match: A0A7S2WV54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV54_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 9.690e-16
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 MAFRATQVVRMMVKKTSTGLVGLAVDVNARANFIALQKQILEKI-KIIPDHAQYRKDVEAISGYRLKVATETED 73
            MA R T+ +R+ V KTSTGLVGL VDVNAR N I++Q Q+L    +++P+   YR  V A S YRLKVATE ++
Sbjct:    6 MALRLTRALRLAVSKTSTGLVGLPVDVNARVNLISMQSQVLAAAERLLPEGTAYRDSVVATSSYRLKVATEHQE 79          
BLAST of mRNA_Ecto-sp13_S_contig17718.5362.1 vs. uniprot
Match: A0A7S2SRG1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRG1_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.340e-15
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 MAFRATQVVRMMVKKTSTGLVGLAVDVNARANFIALQKQILEKI-KIIPDHAQYRKDVEAISGYRLKVATETED 73
            MA R T+ +R+ V KTSTGLVGL VDVNAR N I++Q Q+L    +++P+   YR  V A S YRLKVATE ++
Sbjct:    6 MALRLTRALRLAVSKTSTGLVGLPVDVNARVNLISMQSQVLAAAERLLPEGTAYRDSVVATSSYRLKVATEHQE 79          
BLAST of mRNA_Ecto-sp13_S_contig17718.5362.1 vs. uniprot
Match: K3WST9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WST9_GLOUD)

HSP 1 Score: 72.4 bits (176), Expect = 8.480e-15
Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    5 ATQVVRMMVKKTSTGLVGLAVDVNARANFIALQKQILEKIKIIPDHAQYRKDVEAISGYRLKVATETED 73
            AT+V+RM  KKT+TG+VGL V+ NAR + I + ++ L++IK++P++  YR  VE I+ YRLKV  E ED
Sbjct:    3 ATRVLRMAAKKTTTGIVGLPVNPNARQDLIKIYQKTLQEIKVLPENTVYRDSVERITNYRLKVTLENED 71          
BLAST of mRNA_Ecto-sp13_S_contig17718.5362.1 vs. uniprot
Match: A0A2D4BMW9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMW9_PYTIN)

HSP 1 Score: 72.0 bits (175), Expect = 1.230e-14
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    5 ATQVVRMMVKKTSTGLVGLAVDVNARANFIALQKQILEKIKIIPDHAQYRKDVEAISGYRLKVATETED 73
            AT+V+RM V+KT+TG+VGL V+VNAR + IAL  + L+  + +P+   YRK VE I+ YRLKV  E ED
Sbjct:    3 ATRVLRMAVRKTTTGIVGLPVNVNARQDLIALYNKTLQAAQTLPEGIAYRKAVEQITNYRLKVVMENED 71          
BLAST of mRNA_Ecto-sp13_S_contig17718.5362.1 vs. uniprot
Match: A0A8K1FMG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMG6_PYTOL)

HSP 1 Score: 72.0 bits (175), Expect = 1.230e-14
Identity = 35/69 (50.72%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    5 ATQVVRMMVKKTSTGLVGLAVDVNARANFIALQKQILEKIKIIPDHAQYRKDVEAISGYRLKVATETED 73
            AT+V+RM V+KTSTG+VGL V+ NAR + IA+ ++ L++++++PD   YR  VE I+ YRLKV  + ED
Sbjct:    3 ATRVLRMAVRKTSTGIVGLPVNPNARNDLIAIYQKTLKEVQVLPDGIAYRSAVEKITNYRLKVVLDNED 71          
BLAST of mRNA_Ecto-sp13_S_contig17718.5362.1 vs. uniprot
Match: A0A5D6XW11_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW11_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.700e-14
Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    5 ATQVVRMMVKKTSTGLVGLAVDVNARANFIALQKQILEKIKIIPDHAQYRKDVEAISGYRLKVATETED 73
            AT+V+RM V KTSTG+VGL V+ NAR + I L ++ L+++K++P+ A YR  VE I+ YRLKV  + +D
Sbjct:    3 ATRVLRMAVTKTSTGIVGLPVNPNARQDLIKLYQKTLQEVKVLPEDAVYRDSVERITNYRLKVVLDNDD 71          
BLAST of mRNA_Ecto-sp13_S_contig17718.5362.1 vs. uniprot
Match: A0A7S4E5V8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5V8_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.570e-12
Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 0
Query:   10 RMMVKKTSTGLVGLAVDVNARANFIALQKQILEKIKIIPDHAQYRKDVEAISGYRLKVATETED 73
            R    KT+TG+VGL VD +AR   IAL +Q+L++IK +P+ A+YRK VEA   YRLK   E ED
Sbjct:   54 RAATTKTTTGIVGLPVDPHARETLIALNEQLLDEIKQVPEGAEYRKSVEATCNYRLKCLRENED 117          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17718.5362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTF5_ECTSI1.980e-3995.89NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus... [more]
A0A7S2BEJ1_9STRA1.240e-1861.11Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835Z296_9STRA8.020e-1870.31NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2WV54_9STRA9.690e-1654.05Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2SRG1_9STRA2.340e-1554.05Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K3WST9_GLOUD8.480e-1550.72Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BMW9_PYTIN1.230e-1453.62Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1FMG6_PYTOL1.230e-1450.72Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XW11_9STRA1.700e-1450.72Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S4E5V8_9STRA2.570e-1253.13Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006806NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5PFAMPF04716ETC_C1_NDUFA5coord: 22..73
e-value: 1.5E-12
score: 47.2
IPR006806NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5PANTHERPTHR12653NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNITcoord: 11..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17718contigEcto-sp13_S_contig17718:33..893 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17718.5362.1mRNA_Ecto-sp13_S_contig17718.5362.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17718 33..893 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17718.5362.1 ID=prot_Ecto-sp13_S_contig17718.5362.1|Name=mRNA_Ecto-sp13_S_contig17718.5362.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=73bp
MAFRATQVVRMMVKKTSTGLVGLAVDVNARANFIALQKQILEKIKIIPDH
AQYRKDVEAISGYRLKVATETED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006806NDUFA5