mRNA_Ecto-sp13_S_contig17701.5355.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17701.5355.1 vs. uniprot
Match: D8LIR1_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR1_ECTSI) HSP 1 Score: 286 bits (732), Expect = 2.490e-94 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1
Query: 1 STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCVDRRSREGAWQSRPAQA 432
STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCVDRRSREGAWQSRPAQA
Sbjct: 241 STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCVDRRSREGAWQSRPAQA 384
BLAST of mRNA_Ecto-sp13_S_contig17701.5355.1 vs. uniprot
Match: A0A6H5KXP7_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXP7_9PHAE) HSP 1 Score: 186 bits (473), Expect = 6.420e-54 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1
Query: 1 STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMK 285
STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMK
Sbjct: 427 STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMK 521
BLAST of mRNA_Ecto-sp13_S_contig17701.5355.1 vs. uniprot
Match: A0A329T291_9STRA (AAA domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A329T291_9STRA) HSP 1 Score: 166 bits (420), Expect = 8.040e-46 Identity = 79/128 (61.72%), Postives = 103/128 (80.47%), Query Frame = 1
Query: 1 STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 384
S G MHEA+RR+LSV+LQKVEGF K ++CATNRK DLDAALISRF LSI++ LPD TTRR VFG YAKQLS EL LA +++ +S RD+KE C++AER+WASK+++ +ET+ELP+L+ Y++ V
Sbjct: 440 SGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDETTRRAVFGRYAKQLSDEELSQLAAVSSQLSCRDIKEICEYAERKWASKVLKKEETTELPTLRTYMEAV 567
BLAST of mRNA_Ecto-sp13_S_contig17701.5355.1 vs. uniprot
Match: G4YPN9_PHYSP (AAA domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=G4YPN9_PHYSP) HSP 1 Score: 163 bits (412), Expect = 1.080e-44 Identity = 80/128 (62.50%), Postives = 101/128 (78.91%), Query Frame = 1
Query: 1 STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 384
S G MHEA+RR+LSV+LQKVEGF K ++CATNRK DLDAALISRF LSI++ LPD TRR VF YAKQLS EL LATI+ +S RD+KE C++AER+WASK+++ +ET+ELP+LK Y++ V
Sbjct: 436 SGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDEKTRRAVFARYAKQLSDDELGQLATISPQLSCRDIKEICEYAERKWASKVLKKEETTELPTLKTYMEAV 563
BLAST of mRNA_Ecto-sp13_S_contig17701.5355.1 vs. uniprot
Match: W2GL19_PHYPR (AAA domain-containing protein n=24 Tax=Phytophthora parasitica TaxID=4792 RepID=W2GL19_PHYPR) HSP 1 Score: 163 bits (412), Expect = 1.130e-44 Identity = 77/128 (60.16%), Postives = 103/128 (80.47%), Query Frame = 1
Query: 1 STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 384
S G MHEA+RR+LSV+LQKVEGF K ++CATNRK DLDAALISRF LSI++ LPD TRR VFG YA+QLS+ EL LA +++ +S RD+KE C++AER+WASK+++ +ET+ELP+L+ Y++ V
Sbjct: 439 SGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDEKTRRAVFGRYARQLSEEELSQLAAVSSQLSCRDIKEICEYAERKWASKVLKKEETTELPTLQTYMEAV 566
BLAST of mRNA_Ecto-sp13_S_contig17701.5355.1 vs. uniprot
Match: A0A0N7L5Q2_PLAHL (Aaa-type atpase family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5Q2_PLAHL) HSP 1 Score: 161 bits (407), Expect = 2.110e-44 Identity = 77/128 (60.16%), Postives = 100/128 (78.12%), Query Frame = 1
Query: 1 STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 384
S G MHEA+RR+LSV+LQKVEGF K ++CATNRK DLDAALISRF LSI++ LPD TRR VFG YAKQLS ELQ +A +++ +S RD+KE C++AER+WASK++R ETSE+P + Y++ +
Sbjct: 365 SGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYDLPDKKTRRAVFGRYAKQLSDEELQHMAAVSSHLSCRDIKEICEYAERKWASKVLRKTETSEVPDTQAYLEAI 492
BLAST of mRNA_Ecto-sp13_S_contig17701.5355.1 vs. uniprot
Match: A0A0W8AYC1_PHYNI (Diatom spindle kinesin-1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8AYC1_PHYNI) HSP 1 Score: 164 bits (415), Expect = 3.580e-44 Identity = 78/128 (60.94%), Postives = 103/128 (80.47%), Query Frame = 1
Query: 1 STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 384
S G MHEA+RR+LSV+LQKVEGF K ++CATNRK DLDAALISRF LSI++ LPD TRR VFG YAKQLS+ EL LA +++ +S RD+KE C++AER+WASK+++ +ET+ELP+L+ Y++ V
Sbjct: 1114 SGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDEKTRRAVFGRYAKQLSEEELSQLAAVSSQLSCRDIKEICEYAERKWASKVLKKEETTELPTLQTYMEAV 1241
BLAST of mRNA_Ecto-sp13_S_contig17701.5355.1 vs. uniprot
Match: A0A225X213_9STRA (ATPase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X213_9STRA) HSP 1 Score: 161 bits (408), Expect = 4.230e-44 Identity = 78/128 (60.94%), Postives = 100/128 (78.12%), Query Frame = 1
Query: 1 STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 384
S G MHEA+RR+LSV+LQKVEGF K ++CATNRK DLDAALISRF LSI++ LPD TRR VF YAKQLS EL LA ++ +S RD+KE C++AER+WASK+++ +ET+ELP+L+ Y+D V
Sbjct: 439 SGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDENTRRAVFARYAKQLSDEELLQLAAVSPQLSCRDIKEICEYAERKWASKVLKKEETTELPTLQTYMDAV 566
BLAST of mRNA_Ecto-sp13_S_contig17701.5355.1 vs. uniprot
Match: A0A7S2WED1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WED1_9STRA) HSP 1 Score: 157 bits (397), Expect = 7.230e-44 Identity = 76/136 (55.88%), Postives = 103/136 (75.74%), Query Frame = 1
Query: 4 TGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQ--ETSELPSLKEYVDCVDRRSREG 405
+G MHEATRR+LSV+LQ+VEGFE+GSK+ LICATNR+ DLD+AL+SRF L ++F LP+ T R VF YAKQL + + + A+ AG+S RD+KE C+H ERRW +KL+R + + ELP LKEY+ +D+R + G
Sbjct: 247 SGDMHEATRRILSVLLQRVEGFEQGSKSTLICATNRRSDLDSALLSRFDLQLRFDLPNDTARLAVFQRYAKQLPEDDARAFASAAAGLSCRDIKEVCEHTERRWVAKLIRKEVPDAQELPPLKEYLHSLDQRLKAG 382
BLAST of mRNA_Ecto-sp13_S_contig17701.5355.1 vs. uniprot
Match: A0A3F2S3V9_9STRA (AAA domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3V9_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.090e-43 Identity = 74/128 (57.81%), Postives = 100/128 (78.12%), Query Frame = 1
Query: 1 STGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVDCV 384
S G MHEA+RR+LSV+LQKVEGF K ++CATNRK DLDAALISRF L I++ LPD TRR V+ YAKQLS+ +L LAT++ +S RD+KE C++AER+WASK+++ +ET E+P+L+ Y++ V
Sbjct: 284 SGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLCIRYNLPDEKTRRAVYSRYAKQLSEEDLLQLATVSPQLSCRDIKEICEYAERKWASKVLKKEETGEVPTLRTYMEAV 411 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17701.5355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17701.5355.1 >prot_Ecto-sp13_S_contig17701.5355.1 ID=prot_Ecto-sp13_S_contig17701.5355.1|Name=mRNA_Ecto-sp13_S_contig17701.5355.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=141bp MHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQback to top mRNA from alignment at Ecto-sp13_S_contig17701:1580..3629- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17701.5355.1 ID=mRNA_Ecto-sp13_S_contig17701.5355.1|Name=mRNA_Ecto-sp13_S_contig17701.5355.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2050bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17701:1580..3629- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17701:1580..3629- >mRNA_Ecto-sp13_S_contig17701.5355.1 ID=mRNA_Ecto-sp13_S_contig17701.5355.1|Name=mRNA_Ecto-sp13_S_contig17701.5355.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=423bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17701:1580..3629- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |