mRNA_Ecto-sp13_S_contig17692.5352.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17692.5352.1 vs. uniprot
Match: D7G6Y6_ECTSI (SpoU_methylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y6_ECTSI) HSP 1 Score: 340 bits (872), Expect = 2.720e-115 Identity = 169/175 (96.57%), Postives = 169/175 (96.57%), Query Frame = 1
Query: 7 VWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKADGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRYATWIHGDLPEDERREVAVTWLMQCVRGSEHILKREG 531
VWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLK DGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVR HGDLPEDERREVAVTWLMQCVRGSEHILKREG
Sbjct: 167 VWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKTDGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALK--HGDLPEDERREVAVTWLMQCVRGSEHILKREG 339
BLAST of mRNA_Ecto-sp13_S_contig17692.5352.1 vs. uniprot
Match: A0A836C8H0_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H0_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.540e-56 Identity = 94/176 (53.41%), Postives = 117/176 (66.48%), Query Frame = 1
Query: 7 VWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKADGYQVVASDLSPSAVPISEIDWSVP-TAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRYATWIHGDLPEDERREVAVTWLMQCVRGSEHILKREG 531
VWA LRT+DSFGIQ+ H+++DP Y K+ RL TM +AMGSQKWL+LHGHD D LKA GY+++ S L P AVP+ IDWS AV GNE+ G+S+ + D TF IPMRGF SFN+SVA SI+LA SA GDL E ERR V + WL++ V E +L+REG
Sbjct: 61 VWAALRTIDSFGIQNVHVIADPELYIKKGRLLTMSSAMGSQKWLSLHGHDSAADCARALKARGYRIIGSSLGPGAVPMDAIDWSARRVAVAFGNEKTGLSEGLLAQCDQTFYIPMRGFAESFNVSVALSIVLA--SAAAGGGLRGGDLGEGERRAVYLRWLLRTVAAGESVLQREG 234
BLAST of mRNA_Ecto-sp13_S_contig17692.5352.1 vs. uniprot
Match: A0A0G4EX06_VITBC (SpoU_methylase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX06_VITBC) HSP 1 Score: 171 bits (432), Expect = 3.350e-49 Identity = 83/176 (47.16%), Postives = 113/176 (64.20%), Query Frame = 1
Query: 7 VWACLRTLDSFGIQHAHIVSDPSTYSKQARLK-TMCTAMGSQKWLTLHGHDRPEDAVAKLKADGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRYATWIHGDLPEDERREVAVTWLMQCVRGSEHILKREG 531
VWACLRTLDSFGIQH ++ P Y +Q + M A+GS +WL++ +A+ +LK G +V ASDL + ++ +D S P +VLGNE GIS+ MR +AD TF +PMRGF SFN+SVAC++ A+LS + W GDL E ER V WLM+CV GS+ +L+R+G
Sbjct: 131 VWACLRTLDSFGIQHTSVIRRPGGYDRQRDINGNMNVALGSSQWLSMQEFQSASEAIGQLKDRGVRVYASDLQEDSTALTSLDVSQPFTIVLGNERTGISEEMRGLADETFFVPMRGFAESFNLSVACAVTCAYLSQMGGLKW--GDLSEGERAAVMTEWLMRCVPGSQQVLERKG 304
BLAST of mRNA_Ecto-sp13_S_contig17692.5352.1 vs. uniprot
Match: A0A4D9CY40_9STRA (SpoU_methylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY40_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.100e-47 Identity = 83/178 (46.63%), Postives = 116/178 (65.17%), Query Frame = 1
Query: 7 VWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKADGYQVVASDLSP--SAVPISEIDWSVP-TAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRYATWIHGDLPEDERREVAVTWLMQCVRGSEHILKREG 531
+WACLR+LD+FG+Q+AH++ D + Y K RL +AMGSQKWLT+ H VA LK +GY V+ASDL P S P+ E+ W+ A+V+GNEERGI++ MR + D TF IPM GF SFN+S + ++ LA +S++ HGDLP E+ + + WL++ V IL+REG
Sbjct: 57 LWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVKWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLK--HGDLPTAEKNLLLLRWLLRSVPQGPAILRREG 232
BLAST of mRNA_Ecto-sp13_S_contig17692.5352.1 vs. uniprot
Match: W7UA00_9STRA (Trna rrna methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA00_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.910e-46 Identity = 83/178 (46.63%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 7 VWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKADGYQVVASDLSP--SAVPISEIDWSVP-TAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRYATWIHGDLPEDERREVAVTWLMQCVRGSEHILKREG 531
+WACLR+LD+FG+Q+AH++ D + Y K RL +AMGSQKWLT+ H VA LK +GY V+ASDL P S P+ E++W+ A+V+GNEERGI++ MR + D TF IPM GF SFN+S + ++ LA +S++ HGDLP E+ + + WL++ V IL+REG
Sbjct: 198 LWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVNWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLK--HGDLPTAEKNLLLLRWLLRSVPQGPAILRREG 373
BLAST of mRNA_Ecto-sp13_S_contig17692.5352.1 vs. uniprot
Match: A0A7S2A9L6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9L6_TRICV) HSP 1 Score: 160 bits (405), Expect = 2.170e-44 Identity = 78/140 (55.71%), Postives = 101/140 (72.14%), Query Frame = 1
Query: 7 VWACLRTLDSFGIQHAHIVSDPSTYSKQARLKT---MCTAMGSQKWLTLHGHDRPEDAVAKLKADGYQVVASDLSPSAVPISEIDWSV-PTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSA 414
VWACLRT+DSFG+Q+ +V D Y + ++ M TAMGS KWL+L H E+AV +KA+GY++ ASDL+P++ + E+DW V P VV+GNEERGISD MR+MAD TF +PM GF SFN+SVA SI LAH+SA
Sbjct: 215 VWACLRTIDSFGVQNVDLVVDSGMYKGKMAVQQKRGMRTAMGSAKWLSLRNHPSTEEAVRAIKAEGYKIYASDLNPNSQDVREVDWDVGPVCVVMGNEERGISDEMREMADVTFTLPMVGFAESFNLSVATSITLAHMSA 354
BLAST of mRNA_Ecto-sp13_S_contig17692.5352.1 vs. uniprot
Match: A0A7S2KIJ5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KIJ5_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.440e-43 Identity = 81/171 (47.37%), Postives = 106/171 (61.99%), Query Frame = 1
Query: 7 VWACLRTLDSFGIQHAHIVSDPSTYSKQARL---KTMCTAMGSQKWLTLHGHDRPEDAVAKLKADGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRY----ATWIHGDLPEDERREVAVTWLMQCV 498
V+ACLRT+DSFG Q+ I+ D S Y K L + M +AMGS W+TL H EDAV +LK GY++ ASDL+PS+ + E+DW P VV+GNE+RGIS MR++AD TF +PM GF SFN+SVA +I AH+SA GDL E E + + W M +
Sbjct: 15 VFACLRTIDSFGFQYVDIIVDSSKYDKPMALIQKQGMRSAMGSAHWITLTNHLSTEDAVKQLKGQGYRIFASDLNPSSKDVRELDWDWPICVVMGNEDRGISQEMRELADETFTLPMCGFAESFNLSVATAITCAHMSASSREKDKGPIQPGDLDEHEVNCLRLKWYMNSL 185
BLAST of mRNA_Ecto-sp13_S_contig17692.5352.1 vs. uniprot
Match: A0A7S0Y847_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y847_9STRA) HSP 1 Score: 150 bits (379), Expect = 8.830e-41 Identity = 84/195 (43.08%), Postives = 120/195 (61.54%), Query Frame = 1
Query: 7 VWACLRTLDSFGIQHAHIVSDPSTYS-KQA--RLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKADGYQVVASDLSPSAVPISEIDWSV---PTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRY-----------ATWIHGDLPEDERREVAVTWLMQCV---RGSEHILKREG 531
VWACLRT+DSFG+Q+ ++ D Y+ KQA + K M TAMGS +WLTL H ++A+ +++ G+++ ASDL+P++ + +IDW P +V+GNE+RGIS MR+MAD TF +PM GF SFN+SVA SI LAH+SA Y GDL E E + + L+ + R S+ +LK+ G
Sbjct: 179 VWACLRTIDSFGMQNVDVIIDSGRYAGKQAISQKKGMRTAMGSAQWLTLTNHHTTKEAIDQIRDQGFKIYASDLNPNSKDVRDIDWDADDRPICIVMGNEDRGISQEMREMADETFTLPMSGFAESFNLSVATSITLAHMSAKSYNCQKDPDGKRKGPLRPGDLSEHEYNCLYLKGLLHSLPQKRMSKALLKKAG 373
BLAST of mRNA_Ecto-sp13_S_contig17692.5352.1 vs. uniprot
Match: A0A7S2XPD6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPD6_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.880e-39 Identity = 76/158 (48.10%), Postives = 102/158 (64.56%), Query Frame = 1
Query: 7 VWACLRTLDSFGIQHAHIVSDPSTYSKQARL---KTMCTAMGSQKWLTLHGHDRPEDAVAKLKADGYQVVASDLSPSAVPISEIDW--SVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRYATWIHGDLPEDERR 465
VWACLRT+DSFGIQ+ +V Y +A + K M TAMGS +WLTL H AVA +K G+++ ASDL+P++ + E+DW + P VV+GNE GISD MR++AD TF +PM GF SFN+SVA +I LAH+SA G P+D+ +
Sbjct: 182 VWACLRTIDSFGIQNVDVVMQGDNYRGKAAIVQKKGMRTAMGSAQWLTLINHPDTASAVASIKQQGFKIYASDLNPNSKDVRELDWVNAGPICVVMGNENNGISDEMRELADETFTLPMSGFAESFNLSVATAITLAHMSAKS------GTSPDDKTK 333
BLAST of mRNA_Ecto-sp13_S_contig17692.5352.1 vs. uniprot
Match: A0A0G4HU07_9ALVE (SpoU_methylase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HU07_9ALVE) HSP 1 Score: 149 bits (377), Expect = 2.060e-39 Identity = 82/189 (43.39%), Postives = 112/189 (59.26%), Query Frame = 1
Query: 7 VWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKADGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLS---------------AVRYATWIHGDLPEDERREVAVTWLMQCVRGSEHILKRE 528
VWA LRTLDSFG+Q A +++ YS++ M A+GS KWL+L H+ V +LK +GY+V ASDLS SAV +S++D S P AVV+G+E +GI+D MR ADATF IPM+GF S N+SVAC++IL L A+ W+ G LPE EV ++ R +E ++ E
Sbjct: 332 VWAALRTLDSFGVQRADLIATRGDYSRRNLRGAMTAALGSSKWLSLRQHETTMGCVERLKEEGYRVYASDLSESAVCLSDLDISRPFAVVMGSELKGITDEMRQAADATFFIPMKGFAESLNLSVACAVILTQLDLRGGLKPGCMTEEDRAMLLFRWLSGQLPETGWSEVLAQEGVKLSRLTEERIEGE 520 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17692.5352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17692.5352.1 >prot_Ecto-sp13_S_contig17692.5352.1 ID=prot_Ecto-sp13_S_contig17692.5352.1|Name=mRNA_Ecto-sp13_S_contig17692.5352.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=177bp GQVWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGback to top mRNA from alignment at Ecto-sp13_S_contig17692:417..2104+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17692.5352.1 ID=mRNA_Ecto-sp13_S_contig17692.5352.1|Name=mRNA_Ecto-sp13_S_contig17692.5352.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1688bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17692:417..2104+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17692:417..2104+ >mRNA_Ecto-sp13_S_contig17692.5352.1 ID=mRNA_Ecto-sp13_S_contig17692.5352.1|Name=mRNA_Ecto-sp13_S_contig17692.5352.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=531bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17692:417..2104+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |