prot_Ecto-sp13_S_contig1767.5346.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1767.5346.1
Unique Nameprot_Ecto-sp13_S_contig1767.5346.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length788
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1767.5346.1 vs. uniprot
Match: D7G4U4_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U4_ECTSI)

HSP 1 Score: 553 bits (1426), Expect = 8.710e-184
Identity = 330/383 (86.16%), Postives = 337/383 (87.99%), Query Frame = 0 
Query:  441 TVTSDYGRRGAPSSCVSESDDGWLELGSTTGSENMLKFLETPFQKSVRLLNIACENVSDPIVRKVLKTVAQLLSDPDSLHKVKEGSIRRMTMDLGTRNYLENVLQTPVKSTTAEDNWKKLRTGMFVVRAMAREAAAAEDFLSAYETRQRAKSAESSVDNDNRNSELDDLLEDIENGVDTTTQDLVNTTIARKSS-AAAYAQDGEANRFSNFNRNLILGQQLVAKTLSRGDLRKDPDRLSVR----------------------------------ELRDLVSEHKTPDKIMELTTVEERATDEXXXXXXXXXXXXXXXXXXXXXGAGQESKEEQGVSPVQDDVCEVMLIPRLPILDESVVGNVASLLADGQFLKWDFNVFTLE 788
            TVTSD GRRGAPSS VSESDDGW ELG+TTGSENMLKFLETPFQKSVRLLNIACENVSDPIVR+VLKTVAQLLSDPDSLHKVKEGSIRRMTMDLGTRNYLENVLQTPVKST+AEDNWKKLRTGMFVVRAMAREAAAAEDFLSAYETRQRAKS ESSVDNDN+ SELDDLLEDIENGVDTTTQDLVNTTIARKSS AAAYAQDGE+NRFSNFNRNLILGQQLVAKTLSRGDLRKDPDRLSVR                                  ELRDLVSEHKTPDKIMELTTVEERA  EXXXXXXXXXXXXXXXXXXXXXGAGQE KEE  VSPVQDDVCE+MLIPRLPILDESVVGNVASLLADGQFLKW+FNVF LE
Sbjct:   50 TVTSDGGRRGAPSSGVSESDDGWSELGNTTGSENMLKFLETPFQKSVRLLNIACENVSDPIVRRVLKTVAQLLSDPDSLHKVKEGSIRRMTMDLGTRNYLENVLQTPVKSTSAEDNWKKLRTGMFVVRAMAREAAAAEDFLSAYETRQRAKSGESSVDNDNKKSELDDLLEDIENGVDTTTQDLVNTTIARKSSSAAAYAQDGESNRFSNFNRNLILGQQLVAKTLSRGDLRKDPDRLSVRAAVGVETEGGRRTRSALNKGCTCATIRRMNSHPQELRDLVSEHKTPDKIMELTTVEERAAHEXXXXXXXXXXXXXXXXXXXXXGAGQEDKEEHDVSPVQDDVCEMMLIPRLPILDESVVGNVASLLADGQFLKWEFNVFALE 432
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BLAST of mRNA_Ecto-sp13_S_contig1767.5346.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 5.920e-16
Identity = 100/358 (27.93%), Postives = 157/358 (43.85%), Query Frame = 0 
Query:  448 RRGAPSSCVSESDDGWLELGSTTGSENMLKFLETPFQKSVRLLNIACENVS-------------DPIVRKVLKTVAQLLSDPDSLHKVKEGSIRRMTMDLGTRNYLENVLQTPVKSTT--AEDNWKKLRTGMFVVRAMAREAAAAEDFLSAYETRQRAKSAESSVDNDNRNSELDDLLEDIENGVDTTTQDLVNTTIARKSSAAAYAQDGEANRFSNFNRNLILGQQLVAKTLSRGDLRKDPDRLSVRELRDLVSEHKTPDKIMELTTVEERATDEXXXXXXXXXXXXXXXXXXXXXGAGQESKEEQGVSPVQDDVC--EVMLIPRLPILDESVVGNVASLLADGQFLKWDFNVFTLE 788
            R G+ S     SD G  +        ++L  LETPFQ+SVRLLN A    S             +  + + L+ V  LL+DPDSLH +K  SIRR+++D GTR+Y++NVLQ+PV + T  A  NW+KL+  + +  A+  ++A   D  +      R  SA +++ ND  +S+  D  +    G             A           G A  FS  N  L   Q  V KT+ R +  KDP  +S+ +LRD+++                RA+                           ++ +        +  C   ++ +  LP +  + +  V  L+++ +FLKWDF+VF LE
Sbjct: 1224 RHGSSSVSPVSSDFGRGDGLDRNEESDLLAALETPFQRSVRLLNDAIAMTSGGGSGGARGGGAANLELARQLRKVKDLLADPDSLHVLKPASIRRLSLDTGTRDYIQNVLQSPVNTHTRSAAKNWRKLKVNVAIFNAV--KSAHRPDSAA------REGSARAALGNDMESSDDSDTDQVRGEGW---------AGGAXXXXXXXXXXXGAAVSFSELNVTLERRQSQVHKTVVRSEYYKDPHCVSLDDLRDILAREGV------------RAS-----------------------ALSNKNAKHHRPHDHHNAACPSSLLQVAMLPGMSAASMQQVQELMSNQKFLKWDFDVFDLE 1529
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1767.5346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4U4_ECTSI8.710e-18486.16Phosphodiesterase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z5P1_9STRA5.920e-1627.93Phosphodiesterase n=1 Tax=Tribonema minus TaxID=30... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..293
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..269
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 270..288
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 316..788
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 294..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1767contigEcto-sp13_S_contig1767:4429..15810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1767.5346.1mRNA_Ecto-sp13_S_contig1767.5346.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1767 1856..15810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1767.5346.1 ID=prot_Ecto-sp13_S_contig1767.5346.1|Name=mRNA_Ecto-sp13_S_contig1767.5346.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=788bp
MLESEPDATAGGASSCESGTAVTRLEEGLRRKSLPPLVQEARAIAARGSK
HLGKSSSGSASNSSGGRRFSRRNSGESSNSRDNSDNTSGTRINDNGGDGG
GGDRKFKQQTGPLSCPPATEEMRLSPPVSSARDAIDSVGVGEGGNDGGRD
GGGDKGGGSGEVGGSHNGAIESSRAGVVEVDVRDDPKMSPRTESGIIKQM
DEMRRSIDHHNKATSHYGSASGLQNPKARKEEAAAATEHEGGACEEAVDD
DEDSPQRLFIGWMQARQREFVTVISLGCVTALFATHIAEDFNGTLPMMVT
FIPLAVHVLLVRDIYIKWEDRQKRKHFDREQPPANAQEKTIDTANDGGGG
EKDAAASDPMPAIAAAGAVVEGVDGVDTVGMAAYEVGARVGTTPVVSPDS
EDVKTKPNRSGSTDDQTHAGGSGGSSNDSPCSSNRSGMGGTVTSDYGRRG
APSSCVSESDDGWLELGSTTGSENMLKFLETPFQKSVRLLNIACENVSDP
IVRKVLKTVAQLLSDPDSLHKVKEGSIRRMTMDLGTRNYLENVLQTPVKS
TTAEDNWKKLRTGMFVVRAMAREAAAAEDFLSAYETRQRAKSAESSVDND
NRNSELDDLLEDIENGVDTTTQDLVNTTIARKSSAAAYAQDGEANRFSNF
NRNLILGQQLVAKTLSRGDLRKDPDRLSVRELRDLVSEHKTPDKIMELTT
VEERATDEVSEHKSPDKTLELTTPGERAAGAGQESKEEQGVSPVQDDVCE
VMLIPRLPILDESVVGNVASLLADGQFLKWDFNVFTLE
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