prot_Ecto-sp13_S_contig17658.5341.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17658.5341.1
Unique Nameprot_Ecto-sp13_S_contig17658.5341.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length74
Homology
BLAST of mRNA_Ecto-sp13_S_contig17658.5341.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 6.100e-22
Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    1 MRRDTRASFEALKKFMEKEESNRRKTAKDGDGYVNFEDKMKRVDDGKGRLVWVRTENVEQWRETLRSTAAPS 72
            MR+DTRAS+EALKKFM+KE+ +R K A+DGDGYV+F DKMKRV DG+G +VW+R ENV+QW ++ RS AA S
Sbjct: 1456 MRKDTRASYEALKKFMDKEQMDRLKNARDGDGYVDFRDKMKRVADGRGGMVWIRNENVQQWTDS-RSNAALS 1526          
BLAST of mRNA_Ecto-sp13_S_contig17658.5341.1 vs. uniprot
Match: A0A6H5KSY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY4_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 3.460e-21
Identity = 46/72 (63.89%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    1 MRRDTRASFEALKKFMEKEESNRRKTAKDGDGYVNFEDKMKRVDDGKGRLVWVRTENVEQWRETLRSTAAPS 72
            M+RDTRAS+EALK FME EE  RRK A+DGDGY++F ++MKRV +G+G +VWVR +NV++W E+ RSTAAP+
Sbjct:  450 MQRDTRASYEALKVFMENEERRRRKNARDGDGYIDFREEMKRVTNGRGGMVWVRNDNVQKWLES-RSTAAPT 520          
BLAST of mRNA_Ecto-sp13_S_contig17658.5341.1 vs. uniprot
Match: A0A6H5L1D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D3_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.690e-20
Identity = 43/72 (59.72%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    1 MRRDTRASFEALKKFMEKEESNRRKTAKDGDGYVNFEDKMKRVDDGKGRLVWVRTENVEQWRETLRSTAAPS 72
            ++RDTRAS+EALKKFM+KE+ +R K A+DGDGY++F D+MKRV DG+G +VWVR +NV++W ++  S AAP+
Sbjct:  225 LQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDS-HSIAAPT 295          
BLAST of mRNA_Ecto-sp13_S_contig17658.5341.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.860e-20
Identity = 46/71 (64.79%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 MRRDTRASFEALKKFMEKEESNRRKTAKDGDGYVNFEDKMKRVDDGKGRLVWVRTENVEQWRETLRSTAAP 71
            ++RDTR S+EALKKFM+KE  NRRK AK+GDGY++F +KM+R  DGKG +VWVR ENV++WR++L STA+P
Sbjct:  859 LQRDTRVSYEALKKFMDKE-LNRRKNAKEGDGYIDFREKMQRESDGKGGIVWVRIENVQKWRDSL-STASP 927          
BLAST of mRNA_Ecto-sp13_S_contig17658.5341.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 2.540e-20
Identity = 48/72 (66.67%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    1 MRRDTRASFEALKKFMEKEESNRRKTAKDGDGYVNFEDKMKRVDDGKGRLVWVRTENVEQWRETLRSTAAPS 72
            M+R TRAS+EALKKFM+KEE  R K AKDGDGYV+F D+MKRV DGKG +VWVR +NV++W   L S AAP+
Sbjct: 1022 MQRGTRASYEALKKFMDKEEIKRCKDAKDGDGYVHFRDEMKRVADGKGGMVWVRNKNVQKW---LESRAAPT 1090          
BLAST of mRNA_Ecto-sp13_S_contig17658.5341.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 3.480e-20
Identity = 44/72 (61.11%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    1 MRRDTRASFEALKKFMEKEESNRRKTAKDGDGYVNFEDKMKRVDDGKGRLVWVRTENVEQWRETLRSTAAPS 72
            ++RDTRAS+EALKKFM+KE+  R K  +DGDGY++F D+MKRV DG+G +VWVR ENV++W ++ RS AAP+
Sbjct: 1241 LQRDTRASYEALKKFMDKEQIERVKNTRDGDGYIDFRDEMKRVPDGRGGMVWVRNENVQKWLDS-RSIAAPT 1311          
BLAST of mRNA_Ecto-sp13_S_contig17658.5341.1 vs. uniprot
Match: A0A6H5KRM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRM3_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 4.340e-20
Identity = 42/70 (60.00%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    1 MRRDTRASFEALKKFMEKEESNRRKTAKDGDGYVNFEDKMKRVDDGKGRLVWVRTENVEQWRETLRSTAA 70
            M++DTRASFEA+KKFM+KEE +RRKTA+  DGY++F D+M RV DGKG + WVR +N+++W + L S AA
Sbjct:   42 MQQDTRASFEAVKKFMDKEELSRRKTARGDDGYIDFRDEMTRVTDGKGGMEWVRNKNIQKWLD-LHSIAA 110          
BLAST of mRNA_Ecto-sp13_S_contig17658.5341.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 8.780e-20
Identity = 43/72 (59.72%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    1 MRRDTRASFEALKKFMEKEESNRRKTAKDGDGYVNFEDKMKRVDDGKGRLVWVRTENVEQWRETLRSTAAPS 72
            ++RDTRAS+EALKKFM+KE+ +R K A+DGDGY++F D+MKRV DG+G +VWVR +NV++W ++  S AAP+
Sbjct:  726 LQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDS-HSIAAPT 796          
BLAST of mRNA_Ecto-sp13_S_contig17658.5341.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 8.820e-20
Identity = 43/72 (59.72%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    1 MRRDTRASFEALKKFMEKEESNRRKTAKDGDGYVNFEDKMKRVDDGKGRLVWVRTENVEQWRETLRSTAAPS 72
            ++RDTRAS+EALKKFM+KE+ +R K A+DGDGY++F D+MKRV DG+G +VWVR +NV++W ++  S AAP+
Sbjct:  894 LQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDS-HSIAAPT 964          
BLAST of mRNA_Ecto-sp13_S_contig17658.5341.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.210e-19
Identity = 42/69 (60.87%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    1 MRRDTRASFEALKKFMEKEESNRRKTAKDGDGYVNFEDKMKRVDDGKGRLVWVRTENVEQWRETLRSTA 69
            M+ DTRAS+EALKK M+KE+  R K A+DGDGY++F DKMKRV DG+G +VWVR ENV++W ++  +TA
Sbjct: 1174 MQNDTRASYEALKKLMDKEQVGRLKNARDGDGYIDFRDKMKRVPDGRGGMVWVRNENVQRWLDSHSNTA 1242          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17658.5341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LCS7_ECTSI6.100e-2266.67LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KSY4_9PHAE3.460e-2163.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1D3_9PHAE1.690e-2059.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L846_9PHAE1.860e-2064.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G431_ECTSI2.540e-2066.67LRR-GTPase of the ROCO family, incomplete sequence... [more]
D8LJS7_ECTSI3.480e-2061.11LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KRM3_9PHAE4.340e-2060.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K516_9PHAE8.780e-2059.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1K4_9PHAE8.820e-2059.72Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FUC3_ECTSI1.210e-1960.87LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17658contigEcto-sp13_S_contig17658:2981..3202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17658.5341.1mRNA_Ecto-sp13_S_contig17658.5341.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17658 2804..3205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17658.5341.1 ID=prot_Ecto-sp13_S_contig17658.5341.1|Name=mRNA_Ecto-sp13_S_contig17658.5341.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=74bp
MRRDTRASFEALKKFMEKEESNRRKTAKDGDGYVNFEDKMKRVDDGKGRL
VWVRTENVEQWRETLRSTAAPSG*
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