prot_Ecto-sp13_S_contig17650.5339.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17650.5339.1
Unique Nameprot_Ecto-sp13_S_contig17650.5339.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length89
Homology
BLAST of mRNA_Ecto-sp13_S_contig17650.5339.1 vs. uniprot
Match: A0A6H5K163_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K163_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 4.710e-32
Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = 0
Query:    9 VQLNSGRWTDEEHQGFLRGLEVYGHGNWNAIAVFVPSRSPPQIEAYAQLYFAQGEAARNFQQ 70
            VQLN GRWTDEEHQGFL GLEVYGHGNWNAIAVFVP+RSPPQIEAYA+ YFA GEA +N QQ
Sbjct:   16 VQLNGGRWTDEEHQGFLSGLEVYGHGNWNAIAVFVPTRSPPQIEAYARQYFALGEAVQNLQQ 77          
BLAST of mRNA_Ecto-sp13_S_contig17650.5339.1 vs. uniprot
Match: D7G877_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G877_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.460e-28
Identity = 50/63 (79.37%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    8 RVQLNSGRWTDEEHQGFLRGLEVYGHGNWNAIAVFVPSRSPPQIEAYAQLYFAQGEAARNFQQ 70
            RV LNSG WTDEEH+GFLRGLEVYGHGNWNA+AVFV SRSPPQIEAYAQ Y A+ E A + QQ
Sbjct:    2 RVPLNSGTWTDEEHKGFLRGLEVYGHGNWNAMAVFVLSRSPPQIEAYAQDYMAEKETAHDLQQ 64          
BLAST of mRNA_Ecto-sp13_S_contig17650.5339.1 vs. uniprot
Match: D7G876_ECTSI (MYB DNA binding protein/ transcription factor-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G876_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 8.910e-25
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    9 VQLNSGRWTDEEHQGFLRGLEVYGHGNWNAIAVFVPSRSPPQIEAYAQLYFAQ 61
            +  + GRWTDEEHQGFL GLEVYG+GNW+AIAVFVPSRSPPQIEAYAQ Y AQ
Sbjct:   19 LDTSGGRWTDEEHQGFLHGLEVYGYGNWDAIAVFVPSRSPPQIEAYAQQYVAQ 71          
BLAST of mRNA_Ecto-sp13_S_contig17650.5339.1 vs. uniprot
Match: D7G878_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G878_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 9.990e-24
Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    9 VQLNSGRWTDEEHQGFLRGLEVYGHGNWNAIAVFVPSRSPPQIEAYAQLYFAQGEAARNFQQ 70
            V  N G WTD EHQGFLRGLEVYG+GN +AI +FVPSRSP QIEAYAQ YFA+GEA R+  Q
Sbjct:   15 VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYFAEGEAVRHLHQ 76          
BLAST of mRNA_Ecto-sp13_S_contig17650.5339.1 vs. uniprot
Match: D7FPI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI5_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 5.660e-23
Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    8 RVQLNSGRWTDEEHQGFLRGLEVYGHGNWNAIAVFVPSRSPPQIEAYAQLYFAQGEAARN 67
            R+ L +  WT++EH GFL GLEVYG+GNW+AIAVFVPSRS PQIEAYAQ Y AQGE+  +
Sbjct:    5 RIPLTTEGWTEDEHNGFLHGLEVYGYGNWDAIAVFVPSRSSPQIEAYAQQYVAQGESVHS 64          
BLAST of mRNA_Ecto-sp13_S_contig17650.5339.1 vs. uniprot
Match: A0A6H5JDE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE4_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 2.640e-21
Identity = 42/62 (67.74%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    9 VQLNSGRWTDEEHQGFLRGLEVYGHGNWNAIAVFVPSRSPPQIEAYAQLYFAQGEAARNFQQ 70
            V  N G WTD EHQGFLRGLEVYG+GN +AI +FVPSRSP QIEAYAQ + A+ EA R+  Q
Sbjct:   10 VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWHLAEVEAVRHLHQ 71          
BLAST of mRNA_Ecto-sp13_S_contig17650.5339.1 vs. uniprot
Match: A0A3L6G600_MAIZE (Transcription factor DIVARICATA n=3 Tax=Zea mays TaxID=4577 RepID=A0A3L6G600_MAIZE)

HSP 1 Score: 63.5 bits (153), Expect = 8.420e-10
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   16 WTDEEHQGFLRGLEVYGHGNWNAIA-VFVPSRSPPQIEAYAQLYFAQGE 63
            WT +EH+ FLRGLEVYG GNW  I+  FVP+R+P QI ++AQ YF + E
Sbjct:  158 WTQDEHKNFLRGLEVYGRGNWKNISKYFVPTRTPIQICSHAQKYFHRKE 206          
BLAST of mRNA_Ecto-sp13_S_contig17650.5339.1 vs. uniprot
Match: A0A6S8K8Y0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8K8Y0_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 8.600e-10
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0
Query:   12 NSGRWTDEEHQGFLRGLEVYGHGNWNAIAVFVPSRSPPQIEAYAQLYFA 60
            ++GRWTDEEHQ FLRGL  YG   W  +A  +P+RS  Q+ ++AQ YFA
Sbjct:  234 STGRWTDEEHQAFLRGLHTYGR-EWKKVASHIPTRSSAQVRSHAQKYFA 281          
BLAST of mRNA_Ecto-sp13_S_contig17650.5339.1 vs. uniprot
Match: UPI000E1C29DD (transcription factor DIVARICATA n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=UPI000E1C29DD)

HSP 1 Score: 61.2 bits (147), Expect = 2.480e-9
Identity = 27/51 (52.94%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   16 WTDEEHQGFLRGLEVYGHGNWNAIAV-FVPSRSPPQIEAYAQLYFAQGEAA 65
            WT EEH+ FLRGL VYG G W +I++ FV S++P Q+ ++AQ YF + E+A
Sbjct:   88 WTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQKYFRRVESA 138          
BLAST of mRNA_Ecto-sp13_S_contig17650.5339.1 vs. uniprot
Match: A3B8V8_ORYSJ (Uncharacterized protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A3B8V8_ORYSJ)

HSP 1 Score: 61.6 bits (148), Expect = 3.660e-9
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   14 GRWTDEEHQGFLRGLEVYGHGNWNAIAV-FVPSRSPPQIEAYAQLYFAQGEAA 65
            G WT EEH+ FLRGL VYG G W +I++ FV S++P Q+ ++AQ YF + E+A
Sbjct:  184 GFWTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQKYFRRVESA 236          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17650.5339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K163_9PHAE4.710e-3285.48MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G877_ECTSI1.460e-2879.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G876_ECTSI8.910e-2581.13MYB DNA binding protein/ transcription factor-like... [more]
D7G878_ECTSI9.990e-2472.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FPI5_ECTSI5.660e-2368.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDE4_9PHAE2.640e-2167.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3L6G600_MAIZE8.420e-1059.18Transcription factor DIVARICATA n=3 Tax=Zea mays T... [more]
A0A6S8K8Y0_9STRA8.600e-1055.10Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
UPI000E1C29DD2.480e-952.94transcription factor DIVARICATA n=2 Tax=Oryza sati... [more]
A3B8V8_ORYSJ3.660e-952.83Uncharacterized protein n=1 Tax=Oryza sativa subsp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 12..61
e-value: 6.5E-9
score: 45.6
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..58
e-value: 4.0E-10
score: 39.7
NoneNo IPR availableGENE3D1.10.10.60coord: 14..64
e-value: 1.1E-15
score: 59.5
NoneNo IPR availablePANTHERPTHR44191FAMILY NOT NAMEDcoord: 7..65
NoneNo IPR availablePANTHERPTHR44191:SF12coord: 7..65
IPR017884SANT domainPROSITEPS51293SANTcoord: 11..63
score: 12.143
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 16..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17650contigEcto-sp13_S_contig17650:483..3511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17650.5339.1mRNA_Ecto-sp13_S_contig17650.5339.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17650 483..3512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17650.5339.1 ID=prot_Ecto-sp13_S_contig17650.5339.1|Name=mRNA_Ecto-sp13_S_contig17650.5339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp
TTSSRDRRVQLNSGRWTDEEHQGFLRGLEVYGHGNWNAIAVFVPSRSPPQ
IEAYAQLYFAQGEAARNFQQEVRGVPQQQQPPPQQQYQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017884SANT_dom
IPR009057Homeobox-like_sf