prot_Ecto-sp13_S_contig17640.5335.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17640.5335.1
Unique Nameprot_Ecto-sp13_S_contig17640.5335.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length294
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17640.5335.1 vs. uniprot
Match: D7FKU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKU5_ECTSI)

HSP 1 Score: 427 bits (1099), Expect = 2.470e-149
Identity = 224/256 (87.50%), Postives = 230/256 (89.84%), Query Frame = 0 
Query:    1 MDKALLGVEWRFLAHASDDEPGFSTAWLQQKSLKREADCREREYRNGILAGFANEFGMTSIFPSHRLEQGVDEDDAEGDDVEEEHDNVVCNKTAPQFKFRSR--SPYPRRANHL--KDPPISTVVKTPALPALVAALKKGGVRVDDLQGGESRHAEDTGSWDGVDLASSPCLQQYMVGDNIEDVESAAGNVDAQGRVYGRPGTAQVPVRPSTPPTLLVYKPCISIKVADNVPSELQAMSKLLEMKEKRIE--GPSS 250
            MDKALLGVEWRFLAHASDDEPGFSTAWLQQKSLKREADCREREYRNGILAGFANEFGMTSIFPS RLEQGVDEDDAEGDDVEEEHD+VVCNK  P    R+   +  P R   +  +DPPISTVVKTPALPALVAALKKGGVRVDDLQGG+SRHAEDTGSWDGVDLASSPCLQQYMVGDNIEDVESAAGNV  Q RVYGRP TAQVPVRPSTPPTLLVYKPCISIKVADNVPSELQAMSKLLEMKEKR    GPSS
Sbjct:    1 MDKALLGVEWRFLAHASDDEPGFSTAWLQQKSLKREADCREREYRNGILAGFANEFGMTSIFPSRRLEQGVDEDDAEGDDVEEEHDHVVCNKKGPSTSSRTAPGASLPHRDLPILPEDPPISTVVKTPALPALVAALKKGGVRVDDLQGGDSRHAEDTGSWDGVDLASSPCLQQYMVGDNIEDVESAAGNVGVQERVYGRPSTAQVPVRPSTPPTLLVYKPCISIKVADNVPSELQAMSKLLEMKEKRPTDLGPSS 256
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17640.5335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKU5_ECTSI2.470e-14987.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17640contigEcto-sp13_S_contig17640:297..2369 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17640.5335.1mRNA_Ecto-sp13_S_contig17640.5335.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17640 297..2369 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17640.5335.1 ID=prot_Ecto-sp13_S_contig17640.5335.1|Name=mRNA_Ecto-sp13_S_contig17640.5335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=294bp
MDKALLGVEWRFLAHASDDEPGFSTAWLQQKSLKREADCREREYRNGILA
GFANEFGMTSIFPSHRLEQGVDEDDAEGDDVEEEHDNVVCNKTAPQFKFR
SRSPYPRRANHLKDPPISTVVKTPALPALVAALKKGGVRVDDLQGGESRH
AEDTGSWDGVDLASSPCLQQYMVGDNIEDVESAAGNVDAQGRVYGRPGTA
QVPVRPSTPPTLLVYKPCISIKVADNVPSELQAMSKLLEMKEKRIEGPSS
SEMTAPRPSSEVEGAFERSAMTRLKIGMPMKQLSPTRPKGSRSR
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