mRNA_Ecto-sp13_S_contig17639.5334.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17639.5334.1 vs. uniprot
Match: D7G8Q4_ECTSI (Adenosylhomocysteinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q4_ECTSI) HSP 1 Score: 359 bits (922), Expect = 2.240e-111 Identity = 183/189 (96.83%), Postives = 185/189 (97.88%), Query Frame = -3
Query: 637 ICVMHQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKALQVELTELSTEQADYISVKKEGPFKPDTYRY 1203
IC + QAAMEGFRVVKLDTVV TGDIFITTTGNKGIIMA DMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLK+LQVELTELSTEQADYISVKKEGPFKPDTYRY
Sbjct: 292 ICAL-QAAMEGFRVVKLDTVVKTGDIFITTTGNKGIIMATDMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKSLQVELTELSTEQADYISVKKEGPFKPDTYRY 479
BLAST of mRNA_Ecto-sp13_S_contig17639.5334.1 vs. uniprot
Match: A0A835ZH87_9STRA (Adenosylhomocysteinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH87_9STRA) HSP 1 Score: 298 bits (764), Expect = 2.860e-88 Identity = 146/189 (77.25%), Postives = 170/189 (89.95%), Query Frame = -3
Query: 637 ICVMHQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKALQVELTELSTEQADYISVKKEGPFKPDTYRY 1203
IC + QAAMEGFRVV++++VV GDIFITTTGNKGII A M++MKNNAIVGNIGHFDNEI++ L+A T ++NIKPQVD+F++ DGH +I+LAEGRLLNLGCATGHPSFVMSASFTNQTLAQ+ELW+E+ESGKYARG VYVLPK+LDEKVARLHL +L VELTELS+EQADYI VK GP+KPDTYRY
Sbjct: 294 ICAL-QAAMEGFRVVRMESVVARGDIFITTTGNKGIITEAYMSQMKNNAIVGNIGHFDNEIEMEQLMAATTRVNIKPQVDRFVYPDGHGVIVLAEGRLLNLGCATGHPSFVMSASFTNQTLAQIELWRERESGKYARGKVYVLPKVLDEKVARLHLASLGVELTELSSEQADYIGVKVSGPYKPDTYRY 481
BLAST of mRNA_Ecto-sp13_S_contig17639.5334.1 vs. uniprot
Match: A0A7S2Y3Q8_9STRA (Adenosylhomocysteinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3Q8_9STRA) HSP 1 Score: 298 bits (763), Expect = 3.880e-88 Identity = 150/189 (79.37%), Postives = 167/189 (88.36%), Query Frame = -3
Query: 637 ICVMHQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKALQVELTELSTEQADYISVKKEGPFKPDTYRY 1203
IC + QAAMEGFRVV+L++VVG DIFITTTGNK II+A M KMKNNAIV NIGHFDNEID+AGL+A T ++NIKPQVDKF+F DG A+I+LAEGRL+NLGCATGHPSFVMS SFTNQTLAQ+ELWKEKE+GKYARG VYVLPK+LDEKVARLHL AL VELTELS EQADYI V GP+KPDTYRY
Sbjct: 293 ICAL-QAAMEGFRVVRLESVVGKADIFITTTGNKDIIVADSMEKMKNNAIVCNIGHFDNEIDMAGLMARTTRVNIKPQVDKFVFADGKAVIILAEGRLMNLGCATGHPSFVMSNSFTNQTLAQIELWKEKETGKYARGKVYVLPKVLDEKVARLHLGALGVELTELSKEQADYIGVSVSGPYKPDTYRY 480
BLAST of mRNA_Ecto-sp13_S_contig17639.5334.1 vs. uniprot
Match: A0A7S1Y144_9STRA (Adenosylhomocysteinase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y144_9STRA) HSP 1 Score: 297 bits (760), Expect = 1.020e-87 Identity = 148/189 (78.31%), Postives = 165/189 (87.30%), Query Frame = -3
Query: 637 ICVMHQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKALQVELTELSTEQADYISVKKEGPFKPDTYRY 1203
IC + QAAMEGFRVV+LDTV+GT DIFITTTGNKGII M+KMKNNAIVGNIGHFDNEID+ GL+A T++LNIKPQVDKF++ DGH +I+LAEGRLLNLGCATGHPSFVMS SFTNQTLAQ+ELW E+ESGKY GHVYVLPK LDEKVARLHL +L VELTELS EQADYI+V GP+KP YRY
Sbjct: 292 ICAL-QAAMEGFRVVRLDTVLGTADIFITTTGNKGIITNEHMSKMKNNAIVGNIGHFDNEIDMEGLMAATERLNIKPQVDKFVYPDGHGVIVLAEGRLLNLGCATGHPSFVMSNSFTNQTLAQIELWTERESGKYETGHVYVLPKELDEKVARLHLASLGVELTELSQEQADYINVPVGGPYKPAAYRY 479
BLAST of mRNA_Ecto-sp13_S_contig17639.5334.1 vs. uniprot
Match: A0A024GTM6_9STRA (Adenosylhomocysteinase n=2 Tax=Albugo TaxID=65356 RepID=A0A024GTM6_9STRA) HSP 1 Score: 293 bits (750), Expect = 3.020e-86 Identity = 146/189 (77.25%), Postives = 163/189 (86.24%), Query Frame = -3
Query: 637 ICVMHQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKALQVELTELSTEQADYISVKKEGPFKPDTYRY 1203
IC + QA MEGF+VV+L TVV T DIFITTTGNK IIMAADMAKMKNNAIVGNIGHFDNEID+AG++ TT++ NIKPQVD+F+F DGH +I+LAEGRLLNLGCATGHPSFVMS SFTNQTLAQ+ELWKEK+S KY G VYVLPK LDEKVARLHL L ELTEL+ +QADYI V GPFKP+TYRY
Sbjct: 294 ICAL-QACMEGFQVVRLSTVVSTADIFITTTGNKDIIMAADMAKMKNNAIVGNIGHFDNEIDMAGVLNTTRRYNIKPQVDRFVFPDGHGVIILAEGRLLNLGCATGHPSFVMSNSFTNQTLAQIELWKEKDSNKYQVGKVYVLPKELDEKVARLHLSNLGAELTELTCDQADYIGVNIAGPFKPETYRY 481
BLAST of mRNA_Ecto-sp13_S_contig17639.5334.1 vs. uniprot
Match: A0A482U921_9ARCH (Adenosylhomocysteinase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482U921_9ARCH) HSP 1 Score: 284 bits (726), Expect = 1.030e-85 Identity = 143/191 (74.87%), Postives = 164/191 (85.86%), Query Frame = -3
Query: 637 ICVMHQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATT--KQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKALQVELTELSTEQADYISVKKEGPFKPDTYRY 1203
IC + QAAMEG+RV +L++VV DIF+T TGNK II AA MA MKNNAIVGNIGHFDNEID+AGL TT +++NIKPQVD+++F DGH II+LAEGRLLNLGCATGHPSFVMS+SFTNQTLAQ+ELWKE+ +GKY RG VYVLPK LDEKVARLHL L VELTELS +QA YI VKKEGP+KP+TYRY
Sbjct: 74 ICAL-QAAMEGYRVTRLESVVHEVDIFVTATGNKDIITAAHMAAMKNNAIVGNIGHFDNEIDIAGLEKTTGVRRVNIKPQVDRYVFADGHGIIMLAEGRLLNLGCATGHPSFVMSSSFTNQTLAQIELWKERSTGKYERGRVYVLPKSLDEKVARLHLGKLGVELTELSDDQASYIGVKKEGPYKPNTYRY 263
BLAST of mRNA_Ecto-sp13_S_contig17639.5334.1 vs. uniprot
Match: K0STC2_THAOC (AdoHcyase_NAD domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STC2_THAOC) HSP 1 Score: 280 bits (717), Expect = 7.150e-85 Identity = 135/189 (71.43%), Postives = 161/189 (85.19%), Query Frame = -3
Query: 637 ICVMHQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKALQVELTELSTEQADYISVKKEGPFKPDTYRY 1203
IC + QA MEG+ V L+ VVG DIFITTTGNKGI+MA M KMKNNAIVGNIGHFDNEID+AGL+A TK++NIKPQVD+F+F+ G+ +I+LAEGRLLNLGCATGHPSFVMS SFTNQ LAQ+ELW EK+SGKYA G VYVLPK LDEKVARLHLK+L +LT L+ EQ++Y+ + +GP+KP+TYRY
Sbjct: 44 ICAL-QACMEGYTVCTLEDVVGEADIFITTTGNKGILMADTMGKMKNNAIVGNIGHFDNEIDMAGLMAITKRINIKPQVDRFVFESGNGVIVLAEGRLLNLGCATGHPSFVMSCSFTNQALAQIELWTEKDSGKYATGKVYVLPKALDEKVARLHLKSLGAKLTVLTAEQSEYVGIPVDGPYKPETYRY 231
BLAST of mRNA_Ecto-sp13_S_contig17639.5334.1 vs. uniprot
Match: A0A024TZX4_9STRA (Adenosylhomocysteinase n=14 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TZX4_9STRA) HSP 1 Score: 289 bits (739), Expect = 1.170e-84 Identity = 147/189 (77.78%), Postives = 160/189 (84.66%), Query Frame = -3
Query: 637 ICVMHQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKALQVELTELSTEQADYISVKKEGPFKPDTYRY 1203
IC + QAAM+GF VV+L+TVV DIFITTTGNK IIM MAKMKNNAIVGNIGHFDNEID+ GLV TK+ NIKPQVD+F+F DGH II+LAEGRLLNLGCATGHPSFVMS SFTNQTLAQ+ELW EK+SGKY G VYVLPK LDEKVARLHL L VELT LS EQADYISV EGP+KP+TYRY
Sbjct: 294 ICAL-QAAMDGFIVVRLETVVSIADIFITTTGNKDIIMTEHMAKMKNNAIVGNIGHFDNEIDMLGLVKATKRQNIKPQVDRFVFPDGHGIIMLAEGRLLNLGCATGHPSFVMSNSFTNQTLAQIELWTEKDSGKYQSGKVYVLPKQLDEKVARLHLANLGVELTVLSKEQADYISVPVEGPYKPETYRY 481
BLAST of mRNA_Ecto-sp13_S_contig17639.5334.1 vs. uniprot
Match: A0A7S2RQ39_9STRA (Adenosylhomocysteinase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RQ39_9STRA) HSP 1 Score: 287 bits (735), Expect = 4.410e-84 Identity = 141/189 (74.60%), Postives = 162/189 (85.71%), Query Frame = -3
Query: 637 ICVMHQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKALQVELTELSTEQADYISVKKEGPFKPDTYRY 1203
IC + QA MEGF VV L+ +VG DIFITTTGNKGI+MA M+KMKNNAIVGNIGHFDNE+D+AGL A TK++NIKPQVD+F+F DG +I+LAEGRL+NLGCATGHPSFVMSASFTNQTLAQLELWKEK+SGKYA G VYVLPKLLDEKVARLHL +L LT LS EQ++Y+ + GP+KPDTYRY
Sbjct: 294 ICAL-QACMEGFSVVTLEEIVGKADIFITTTGNKGILMADTMSKMKNNAIVGNIGHFDNELDMAGLEAVTKRINIKPQVDRFVFPDGKGVIVLAEGRLMNLGCATGHPSFVMSASFTNQTLAQLELWKEKDSGKYAIGKVYVLPKLLDEKVARLHLPSLGANLTLLSEEQSEYVGIPINGPYKPDTYRY 481
BLAST of mRNA_Ecto-sp13_S_contig17639.5334.1 vs. uniprot
Match: A0A7S2HB52_9STRA (Adenosylhomocysteinase n=6 Tax=Stramenopiles TaxID=33634 RepID=A0A7S2HB52_9STRA) HSP 1 Score: 285 bits (729), Expect = 3.220e-83 Identity = 141/189 (74.60%), Postives = 161/189 (85.19%), Query Frame = -3
Query: 637 ICVMHQAAMEGFRVVKLDTVVGTGDIFITTTGNKGIIMAADMAKMKNNAIVGNIGHFDNEIDLAGLVATTKQLNIKPQVDKFIFDDGHAIILLAEGRLLNLGCATGHPSFVMSASFTNQTLAQLELWKEKESGKYARGHVYVLPKLLDEKVARLHLKALQVELTELSTEQADYISVKKEGPFKPDTYRY 1203
IC + QA MEG+ V L+ VVG DIFITTTGNKGI+MA M+KMKNNAIVGNIGHFDNEID+ GL+ TK++NIKPQVDKF+F+ G +I+LAEGRLLNLGCATGHPSFVMSASFTNQTLAQ+ELW EK+SGKYARG VYVLPK LDEKVARLHL +L +LT LS EQ+DYI + EGP+KPDTYRY
Sbjct: 294 ICAL-QACMEGYTVTTLEEVVGFADIFITTTGNKGILMADTMSKMKNNAIVGNIGHFDNEIDMDGLMKITKRINIKPQVDKFVFESGSGVIVLAEGRLLNLGCATGHPSFVMSASFTNQTLAQIELWVEKDSGKYARGKVYVLPKALDEKVARLHLDSLGAKLTVLSKEQSDYIGIPIEGPYKPDTYRY 481 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17639.5334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17639.5334.1 >prot_Ecto-sp13_S_contig17639.5334.1 ID=prot_Ecto-sp13_S_contig17639.5334.1|Name=mRNA_Ecto-sp13_S_contig17639.5334.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp MTNEGCPVAHPKLSRRPSARRMIAWPSSKMNLSTCGLMLSCLVVATRPARback to top mRNA from alignment at Ecto-sp13_S_contig17639:780..3526+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17639.5334.1 ID=mRNA_Ecto-sp13_S_contig17639.5334.1|Name=mRNA_Ecto-sp13_S_contig17639.5334.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2747bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17639:780..3526+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17639:780..3526+ >mRNA_Ecto-sp13_S_contig17639.5334.1 ID=mRNA_Ecto-sp13_S_contig17639.5334.1|Name=mRNA_Ecto-sp13_S_contig17639.5334.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=321bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17639:780..3526+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |