prot_Ecto-sp13_S_contig17632.5332.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17632.5332.1
Unique Nameprot_Ecto-sp13_S_contig17632.5332.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length224
Homology
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A6H5KGW7_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW7_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 2.680e-125
Identity = 203/274 (74.09%), Postives = 209/274 (76.28%), Query Frame = 0
Query:    1 MHEVLAPLILVLEKE--------------------------------------------------SIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKATLTSALGAGRGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLSL 224
            MHEVLAPLILVLEKE                                                  SIVNGEPLNAGTHPAFAAILGHGST EDLEADAFWLFSAVM+GLERFYEHGEKAT TSALGAGRGG E G VDSPVVEMCKRLQG RMRAADP+LQQHLSHLDISPQAG        +++LYGMKWARLMFGREFRVEGVLVLWDHIFASSWI+GQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQ VSTAISLSLSL
Sbjct:  182 MHEVLAPLILVLEKEVAAATRAEAIAGDSTXXXXXXXXXXXXXXXXXXXXXXXXXXVKASPWVGKSIVNGEPLNAGTHPAFAAILGHGSTPEDLEADAFWLFSAVMSGLERFYEHGEKATSTSALGAGRGGGEGGSVDSPVVEMCKRLQGVRMRAADPELQQHLSHLDISPQAG--------YLKLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQDVSTAISLSLSL 447          
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: D7FWI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI0_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 4.180e-52
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0
Query:  133 FMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLSL 224
            + QLYGMKWARLMFGREFRVEGVLVLWDHIFASSWI+GQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLSL
Sbjct:  138 YRQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLSL 229          
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A8H7PNJ4_9FUNG (Rab-GAP TBC domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PNJ4_9FUNG)

HSP 1 Score: 120 bits (301), Expect = 1.080e-27
Identity = 73/223 (32.74%), Postives = 116/223 (52.02%), Query Frame = 0
Query:    1 MHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKAT------------LTSALGAGRGGREWGGVD-SPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPP 210
            MHE+LAP+ LVL  E +  G+    G   +   ++      + LE D++ LF  +M+G +++YE  ++ +            L   +G G  G+       +P+V+ C+R+Q   +++ DP L QHL  L I PQ             LYG++W RL+FGREF +E VL LWD IFA       P +   +E + + +++ IR +++  +   CL LLMRYPP
Sbjct:  165 MHELLAPIFLVLNTEGVDIGDGSLVGPADSSTKLMAQVLDKKYLEHDSYALFERLMSGAKKWYEFNDEVSTRLTPAKKKELDLIDPMGLGGTGKTAPAAQLTPIVKSCRRIQHQLLKSTDPALYQHLETLGIEPQ-------------LYGIRWIRLLFGREFSIENVLELWDAIFAED-----PSL-NIVEYICLVLLLRIRDKMVDGEYAECLTLLMRYPP 368          
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A397T3M7_9GLOM (Rab-GAP TBC domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T3M7_9GLOM)

HSP 1 Score: 115 bits (288), Expect = 6.030e-26
Identity = 79/231 (34.20%), Postives = 116/231 (50.22%), Query Frame = 0
Query:    1 MHEVLAPLILVLEKESIVN--GEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKATLTSALGAGRGGR-EWGGVD----------SPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAI 218
            MHE+LAP++ V++KESI N  G  +  G        L     S+ +E D F LFSA+M   + +YE+ ++      +   +G   E+  +           +PVV  C ++    +R  D +L  HL +L+I PQ             LYG++W RL+FGREF +  VLVLWD +FA      +      ++ V VAM++ IR +LL  D   CL +LMRYPP   V   I
Sbjct:  177 MHELLAPILWVVDKESIPNSNGYAVENGEDTIIKQTLN----SDFVEHDTFALFSALMKAAKVYYEYNDEVFNRRPVKRAQGSDLEYARIIKDAQAEAAKLTPVVMKCSKIYDEYLRTIDSELYSHLKNLEIEPQ-------------LYGIRWIRLLFGREFPLNKVLVLWDGMFA------EDPTLRIVDFVCVAMMLLIRDELLESDYAECLSMLMRYPPISDVEVLI 384          
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: U9TLX3_RHIID (Rab-GAP TBC domain-containing protein n=9 Tax=Rhizophagus TaxID=1129544 RepID=U9TLX3_RHIID)

HSP 1 Score: 115 bits (287), Expect = 8.130e-26
Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 0
Query:    1 MHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGE----KATLTSALGAG-------RGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAI 218
            MHE+LAP++ V++KESI N          +   I+     ++ +E D F LFSA+M   + +YE+ +    K  +  A G+        +  +      +PV   C ++    ++  DP+L +HL  L+I PQ             LYG++W RL+FGREF +  VL+LWD IFA      +      +E V VAM++ IR++LL  D T CL +LMRYPP       I
Sbjct:  163 MHELLAPILWVIDKESIPNSS--GYAVENSEDTIIKQTLNADYVEHDTFALFSALMKSAKEYYEYNDEIFNKKPVKRAQGSDLEYARLIKNNQAEVAKATPVFRKCNKIY-EYLQIIDPELYKHLIDLEIEPQ-------------LYGIRWIRLLFGREFPLNKVLILWDGIFA------EDPALRIVEYVCVAMMLLIRNELLDSDYTECLSMLMRYPPTSDTEVLI 369          
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A2Z6QHF3_9GLOM (Rab-GAP TBC domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QHF3_9GLOM)

HSP 1 Score: 115 bits (287), Expect = 8.160e-26
Identity = 78/227 (34.36%), Postives = 118/227 (51.98%), Query Frame = 0
Query:    1 MHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGE----KATLTSALGAG-------RGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPP--DQGV 214
            MHE+LAP++ V++KESI +        +     I+     +E +E D F LFSA+M   + +YE+ +    K  +  A G+        +  +      +PV   C ++    ++  DP+L + L+ L+I PQ             LYG++W RL+FGREF ++ VL LWD IFA      +      +++V VAM++ IR  LL  D TGCL +LMRYPP  D GV
Sbjct:  163 MHELLAPILWVVDKESIPSSNGYAVENNED--TIIKQTLNAEYVEHDTFALFSALMKAAKEYYEYNDEIFNKKPVKRAQGSDLEFARLIKNNQAEVAKATPVFRKCNKIY-EYLQTIDPELHERLNELEIEPQ-------------LYGIRWIRLLFGREFPLDKVLTLWDGIFA------EDPTLRIVDHVCVAMMLLIRDDLLKSDYTGCLSMLMRYPPTSDTGV 367          
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A7I4YGT4_HAECO (Rab-GAP TBC domain-containing protein n=1 Tax=Haemonchus contortus TaxID=6289 RepID=A0A7I4YGT4_HAECO)

HSP 1 Score: 113 bits (283), Expect = 2.050e-25
Identity = 81/228 (35.53%), Postives = 117/228 (51.32%), Query Frame = 0
Query:    1 MHEVLAPLILVLEKESIVNGEPLNAGTHPAFA----AILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKATLTSALGAGRGGREWGGVDSPVVEMCKRLQ--GARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSL 222
            MHE+LAPLI VL  +       L  G     +    +IL H    + LE+D++ +F  +M  + ++YE G +   T       G        +P  ++ + L   G R++  DP+L +HL+ LDI PQ             LYG++W RL+FGREF +  +L +WD +     +  +P V   +E V +AM+V IRH LL  D  GCLQ LMRYPP   VST I  +L
Sbjct:  161 MHEILAPLIFVLFSDQQSFCHCLETGGLTTLSEEDRSILSHVYDPKYLESDSYGMFCEMMLEVTKWYEDGSQPATTPKPFNESGPFMRVQDAAPTNQVMRELVAIGERLQCVDPELAEHLNSLDIPPQ-------------LYGIRWLRLLFGREFAIHDLLYVWDVL-----VCDRP-VARMVECVFLAMLVQIRHLLLQSDYGGCLQYLMRYPPIVDVSTFIQQAL 369          
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A3N2PMH0_9PEZI (WD repeat domain-containing protein n=1 Tax=Sodiomyces alkalinus F11 TaxID=1314773 RepID=A0A3N2PMH0_9PEZI)

HSP 1 Score: 113 bits (282), Expect = 3.640e-25
Identity = 75/210 (35.71%), Postives = 116/210 (55.24%), Query Frame = 0
Query:    1 MHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKATLTSALGAGRGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPP 210
            MHE+LAP++ VL ++++   +  +  T     AIL     S+ +E DAF LFS +M   + FYE  +  T +++  A RG  E     S +VE  K +    +   DP+L +HL  +++ PQ             ++ ++W RL+FGREF  + +LVLWD IFA       P + E I+ + VAM++ IR +LL  D + CLQLL++YPP
Sbjct:  160 MHELLAPVVHVLHEDAV---DRRSTTTDTQVDAILLDVFDSDYIEHDAFALFSKIMERAQVFYEVKDSITRSASASASRGQAE----TSAIVEKSKFIHEDCLARVDPELARHLKDVEVLPQ-------------IFLIRWIRLLFGREFPFDQLLVLWDTIFAID-----PSL-ELIDLICVAMLIRIRWKLLEADYSVCLQLLLKYPP 343          
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A397GIP1_9GLOM (Rab-GAP TBC domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GIP1_9GLOM)

HSP 1 Score: 112 bits (280), Expect = 7.170e-25
Identity = 77/228 (33.77%), Postives = 116/228 (50.88%), Query Frame = 0
Query:    1 MHEVLAPLILVLEKESI--VNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGE-------KATLTSALGAGRGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAIS 219
            MHE+LAP++ V++ ESI   NG  +          I+     S+ +E D F LFS++M   +  YE+ +       K +  + L   R  +E     +PVV  C ++    ++  DP L  HL++L+I PQ             LYG++W RL+FGREF +E VL+LWD +FA      +      ++ V + M++ IR +LL  D  GCL  LMRYPP   V   +S
Sbjct:  166 MHELLAPILWVVDDESIPSANGYAVENDE----ITIIRQTLNSDYVEHDTFVLFSSLMKAAKINYEYNDEVFNRRPKRSQGTDLDYSRMIKEEAAKLTPVVMRCNKIYEEYLQKIDPDLFLHLNNLEIEPQ-------------LYGIRWVRLLFGREFTLEKVLILWDGMFA------EDPTLRIVDFVCLTMMLLIRDELLESDYAGCLSKLMRYPPIDEVELLVS 370          
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A1L9SW47_9EURO (Rab-GAP TBC domain-containing protein n=1 Tax=Penicilliopsis zonata CBS 506.65 TaxID=1073090 RepID=A0A1L9SW47_9EURO)

HSP 1 Score: 112 bits (279), Expect = 8.980e-25
Identity = 73/212 (34.43%), Postives = 110/212 (51.89%), Query Frame = 0
Query:    1 MHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKATLTSALGAGRGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYP-PD 211
            MHE+LAP++ V+++++ V+   L  G       +L      + +E D+F LF  VM  L  +YEH E+ +++  +G            SP+V  C+ LQ + + A DP L  HL  +DI PQ             ++  +W RL+FGREF  + VLV+WDH+FA           + +E   VAM++ IR QLL  D +  L  L+RYP PD
Sbjct:  159 MHEILAPILWVVDRDT-VDKSSLGDGLGEQNGDVLQL-LDPDYIEHDSFTLFCTVMQTLRVYYEHKEQRSISGQVGV-----------SPIVSRCQNLQTSMLAATDPDLSNHLQAVDILPQ-------------IFLTRWIRLLFGREFPFDDVLVVWDHLFAEGLRT------DLVEFFCVAMLLRIRWQLLEADYSTALSTLLRYPSPD 338          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGW7_9PHAE2.680e-12574.09Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D7FWI0_ECTSI4.180e-5296.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8H7PNJ4_9FUNG1.080e-2732.74Rab-GAP TBC domain-containing protein n=1 Tax=Umbe... [more]
A0A397T3M7_9GLOM6.030e-2634.20Rab-GAP TBC domain-containing protein n=1 Tax=Glom... [more]
U9TLX3_RHIID8.130e-2633.62Rab-GAP TBC domain-containing protein n=9 Tax=Rhiz... [more]
A0A2Z6QHF3_9GLOM8.160e-2634.36Rab-GAP TBC domain-containing protein n=2 Tax=Rhiz... [more]
A0A7I4YGT4_HAECO2.050e-2535.53Rab-GAP TBC domain-containing protein n=1 Tax=Haem... [more]
A0A3N2PMH0_9PEZI3.640e-2535.71WD repeat domain-containing protein n=1 Tax=Sodiom... [more]
A0A397GIP1_9GLOM7.170e-2533.77Rab-GAP TBC domain-containing protein n=1 Tax=Dive... [more]
A0A1L9SW47_9EURO8.980e-2534.43Rab-GAP TBC domain-containing protein n=1 Tax=Peni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.80coord: 90..224
e-value: 1.3E-22
score: 82.0
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 1..203
NoneNo IPR availablePANTHERPTHR22957:SF337TBC1 DOMAIN FAMILY MEMBER 29-RELATEDcoord: 1..203
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..166
score: 16.33
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 94..221
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 1..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17632contigEcto-sp13_S_contig17632:152..1710 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17632.5332.1mRNA_Ecto-sp13_S_contig17632.5332.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17632 146..1710 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17632.5332.1 ID=prot_Ecto-sp13_S_contig17632.5332.1|Name=mRNA_Ecto-sp13_S_contig17632.5332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp
MHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFW
LFSAVMNGLERFYEHGEKATLTSALGAGRGGREWGGVDSPVVEMCKRLQG
ARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREF
RVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTG
CLQLLMRYPPDQGVSTAISLSLSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf