mRNA_Ecto-sp13_S_contig1763.5329.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1763.5329.1
Unique NamemRNA_Ecto-sp13_S_contig1763.5329.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: D7G3Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Y9_ECTSI)

HSP 1 Score: 653 bits (1684), Expect = 2.360e-222
Identity = 385/431 (89.33%), Postives = 390/431 (90.49%), Query Frame = 1
Query:    1 RMLEVGFGELKVNFKRLASDLGDNPFDTLGVLALIEQAQLKQAHLVTLGILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAIVGTRGNAKAKEQNEGGEAQKAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLKA---SEYVEQADKLEEASTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSR-QELCTLCYQHTLDPGAVAVKRAATEIGXXXXXXXXXXXXXXXXXXXXXXXXXRI-DDGEESGLASPSSAGGRSFGGGSGAFGGSFSSLTSPTHAGRDSSXXGVFGTSGSGAHTPPGGGSRLSSPRAGGGNSPVNRGKQFFAKHLRM 1278
            +MLEVGFGELK                          AQLKQAHLVTLGILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAA+VGTRGNAKAKEQ+EGGEAQKAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLK    SEYVEQADKLEE STTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVI EGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSR +ELCTLCYQHTLDPGAVAVKRAATEIGXXXXXXXXXXXXXXXXXXXXXXXXX   DDGEESGLASPSSAGGRSFGGGSGAFGGSFSSLTSPTH GRDSS  GVFG SGSGAHTPPGGGS LSSPRAGGGNSPV+RGKQFFAKHLRM
Sbjct:  819 KMLEVGFGELK--------------------------AQLKQAHLVTLGILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAVVGTRGNAKAKEQDEGGEAQKAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLKVQVLSEYVEQADKLEEVSTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVISEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSRYEELCTLCYQHTLDPGAVAVKRAATEIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDGEESGLASPSSAGGRSFGGGSGAFGGSFSSLTSPTHTGRDSSGSGVFGVSGSGAHTPPGGGSGLSSPRAGGGNSPVHRGKQFFAKHLRM 1223          
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A835YUC5_9STRA (Exocyst complex component Sec3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUC5_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.090e-43
Identity = 107/285 (37.54%), Postives = 156/285 (54.74%), Query Frame = 1
Query:   67 DNPFDTLGVLALIEQAQLK---QAHLVTLGILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAIVGTRGNAKAKEQNEGGEAQKAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAAT--MRPLKASE-YVEQADKLEEASTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSR-QELCTLCYQHTLDPGAVAV 900
            D   D LG L ++++A  +   + H+    +++EFK +L+ +F KFI +QV W+Q  + DAK+ G+LA  AK P+L+ R+Q                                           A  NPKY +++++EN +FF  T  +R +   E YV QA    + ++  YLEW++  QFP    FFA++E+LV +VGA DV YHEPK+NL+A LKR  D K + +GLK  + RM KH++KE  LL  LW  L+D LFA FSR +ELC +CY   + P A  V
Sbjct:  706 DQVSDMLGALTVLDEAHGRADCENHIAA-HVILEFKVILVGKFNKFIGEQVLWVQNSKTDAKRPGVLAPFAKLPSLVDRMQ------------------------------------------TAQANPKYANVIKMENLYFFKHTIGLRDVPVLEDYVLQASSNFDTTSQNYLEWVLRCQFPHAMAFFARIEELVASVGAQDVPYHEPKKNLDAMLKRHLDEKTVPDGLKLIYARMNKHLSKESCLLPVLWDHLNDMLFAQFSRYEELCHVCYGFKMVPSASQV 947          
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A7S3FZU7_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3FZU7_9EUKA)

HSP 1 Score: 80.9 bits (198), Expect = 3.950e-13
Identity = 66/253 (26.09%), Postives = 118/253 (46.64%), Query Frame = 1
Query:  142 LGILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAIVGTRGNAKAKEQNEGGEAQKAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLKAS--------EYVEQADKLEEASTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEP--KRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMF-SRQELCTLCY 867
            + +L++ K  L   F +FI  Q+S +   + +++  G+L    K PT +++L++      +G R             A  +Y +L++ LFE ++ +A +  KY H+V++EN+H F+A+MR +  S        +YV+QADK        YL W++      + +F   V ++   + A+++ Y E   K  L   L   G    + + L    +RM KH++ E  L   L   L   L  +  S   +   CY
Sbjct:   93 INMLLQVKFSLQSVFTRFIDAQISAMGELKPNSRYCGVLLPFKKFPTFVRKLESQMP---MGRRQPI----------ADSSYSKLIVRLFEWLDGIARQEEKYYHIVKMENFHHFSASMREVLQSCPGLESVRDYVKQADKKYGEHEQAYLNWIIHDGIGKVQEFCNGVTEMRDALSASEIQYQEAFSKDKLRRLLADVGGRNKVHKALADMKKRMEKHLSVEENLHPKLCDLLQSKLKTLLDSLLSILVECY 332          
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A2P5VXM1_GOSBA (Sec3-PIP2_bind domain-containing protein n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5VXM1_GOSBA)

HSP 1 Score: 70.9 bits (172), Expect = 2.330e-9
Identity = 59/231 (25.54%), Postives = 111/231 (48.05%), Query Frame = 1
Query:  181 RFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAIVGTRGNAKAKEQNEGGEAQ----KAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLK-----ASEYVEQADKLEEASTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVT------YHEP------KRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAK 810
            +F KF+ +    I+    + ++ G+L+ + +  TL  R+                  EQ   G+++    +AY + V  +F  +E++A  +PKY  +  LENY  F  ++  L       +++  QA +  E + TR++  ++ YQF  L QF  K+EDL+ T+ A +V+      +  P      K +L   LK    +  + + + A ++++ K++T E +LL  LW K
Sbjct:  809 QFSKFVDEACHQIERNERNVRQMGVLSYIPRFATLATRM------------------EQYIQGQSRDLVDQAYTKFVSVMFATLEKLAQTDPKYADIFLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARKIEDLMFTISAEEVSMLLIVLFQIPFQLGLSKMDLRKMLK--SSLSGVDKSITAMYKKLQKNLTSE-ELLPSLWDK 1018          
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A7I8K836_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K836_SPIIN)

HSP 1 Score: 68.2 bits (165), Expect = 1.590e-8
Identity = 53/230 (23.04%), Postives = 111/230 (48.26%), Query Frame = 1
Query:  148 ILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAIVGTRGNAKAKEQNEGGEAQ----KAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLK-----ASEYVEQADKLEEASTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAK 810
            +L + +  +  +F KF+ +    I+    + ++ G+L+ + +  TL  R+                  EQ   G+++    +AY + V  +F  +E++A  +PK   +V LENY  F  ++  L       +++  QA +  E + TR++  ++  QF  + QF  K+E+L+ T+ A +V+Y      ++     +  +  + + L   ++++ K++T E +LL  LW K
Sbjct:  642 LLDDLETRISDQFTKFVDEACRQIERNERNVRQMGVLSYIPRFATLATRM------------------EQYIQGQSRDLVDQAYTKFVSIMFVTLEKIAQADPKSADIVLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHITAIIYLQFERMFQFARKIEELLYTIPAEEVSYQIGLSKMDMRKTIKASLSNVDKSLANMYRKLQKNLTSE-ELLSSLWDK 852          
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: UPI001402B0A0 (exocyst complex component 1 isoform X1 n=4 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001402B0A0)

HSP 1 Score: 65.1 bits (157), Expect = 1.520e-7
Identity = 56/183 (30.60%), Postives = 89/183 (48.63%), Query Frame = 1
Query:  367 GEAQKAYQRLVIALFEHVEEVASRNPKYEH-MVRLENYHFFAATMRPLKASEY-VEQADKLEEAST--TRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHE---PKRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSRQE-LCTLCYQHTLDPGA 891
            G+  KAY RL+ A+F++VE+VA+ + K    +V +ENYH   AT+  LK S    E+ D   + +     Y+   +G   P L  FF  VE  V     AD   ++    K+ L   L R+   K +  GL+  ++++ KH+ +E  LL  +W  + +     +   E L + CY     PGA
Sbjct:  724 GDLDKAYARLIRAVFDNVEKVAAESQKTPRDVVLMENYHHLFATLSRLKISSLDAERRDAKNKYAEHLQAYVTSYLGQPLPKLNVFFEGVEARVAQGVKADEVGYQLMFSKQELRKVL-REYPGKEVKRGLENLYKKVDKHLCEEENLLQVVWHSMQEEFIRQYKHFEGLISRCY-----PGA 900          
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A8C4N5F1_EPTBU (Exocyst complex component 1 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4N5F1_EPTBU)

HSP 1 Score: 62.4 bits (150), Expect = 1.070e-6
Identity = 53/175 (30.29%), Postives = 83/175 (47.43%), Query Frame = 1
Query:  367 GEAQKAYQRLVIALFEHVEEVASRNPKY-EHMVRLENYHFFAATMRPLKAS--EYVEQADKLEEASTTR-YLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHE---PKRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSR-QELCTLCY 867
            GE  KAY +L+ A+F  +E+ A  +PK  + +V +ENYH   AT+  LK    E   +  K E A     Y+   +G   P L +FF  VE  V      D   ++    K+ L   L R+   K + +GL+  ++++ KH  +E  LL  +W  L +     +   +EL   CY
Sbjct:  677 GELDKAYSKLIAAIFVALEKAALESPKTPKDVVLMENYHHLFATLSRLKIGCLENERRDAKHEYADHLHAYVISSLGQPLPKLNEFFEGVEVRVAQGVKEDEVGYQLAFSKQELRKVL-REYPGKEVKKGLENLYRKVEKHFCEEENLLQVVWRSLQEEFIRQYKHFEELIARCY 850          
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A151PAH0_ALLMI (Centrosomal protein of isoform B n=3 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151PAH0_ALLMI)

HSP 1 Score: 61.6 bits (148), Expect = 2.230e-6
Identity = 53/188 (28.19%), Postives = 90/188 (47.87%), Query Frame = 1
Query:  367 GEAQKAYQRLVIALFEHVEEVASRNPKYEH-MVRLENYHFFAATMRPLKASEYVEQADKLEEASTTR---YLEWLVGYQFPVLTQFFAKVEDLVMT-VGAADVTYHEP--KRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSRQE-LCTLCYQHTLDPGAVAVKR 906
            G+  KAY +L+ A+F +VE+VA+ + K    +V +EN+H   AT+  LK S    +  + ++  T     Y+ + +G     L  FF  VE  V   V   +V+Y     K+ L   +K     K + +GL   ++++ KH+ +E  LL  +W  + D     +   E L   CY     PG+ A ++
Sbjct:  705 GDLDKAYLKLITAVFFNVEKVANESQKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNHFFEGVEARVAQGVREEEVSYQLAFNKQELRKVIKEYPG-KEVKKGLDNLYKKVDKHLCEEENLLQVVWHSMQDEFIRQYKHFEGLIARCY-----PGSAAERK 886          
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A2D4LCQ4_9SAUR (Sec3_C domain-containing protein (Fragment) n=1 Tax=Micrurus spixii TaxID=129469 RepID=A0A2D4LCQ4_9SAUR)

HSP 1 Score: 60.8 bits (146), Expect = 2.990e-6
Identity = 54/176 (30.68%), Postives = 84/176 (47.73%), Query Frame = 1
Query:  367 GEAQKAYQRLVIALFEHVEEVASRNPKYEH-MVRLENYHFFAATMRPLKASEYVEQADKLEEASTTRYLEWLV----GYQFPVLTQFFAKVEDLVMT-VGAADVTYHEP--KRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSRQE-LCTLCY 867
            G+  KAY +L+ A+F +VE+VA+ + K    +V +EN+H   AT+  LK S  +E   K  +   T YL+  V    G     L  FF  VE  V   V   +V+Y     K+ L   +K     K + +GL   ++++ KH+ +E  LL  +W  + D     +   E L   CY
Sbjct:  502 GDLDKAYLKLIRAVFANVEKVANESQKTPRDVVMMENFHHIFATLSRLKIS-CLEAEKKEAKQQYTDYLQLYVIYSLGQPLEKLNHFFEGVEARVAQGVREEEVSYQLAFSKQELRKVIKEYPG-KEVKKGLDNLYRKVDKHLCEEENLLQVVWHSMQDEFIRQYKHFEGLIARCY 675          
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A674NB58_TAKRU (Sec3-PIP2_bind domain-containing protein n=1 Tax=Takifugu rubripes TaxID=31033 RepID=A0A674NB58_TAKRU)

HSP 1 Score: 60.8 bits (146), Expect = 3.160e-6
Identity = 49/175 (28.00%), Postives = 85/175 (48.57%), Query Frame = 1
Query:  367 GEAQKAYQRLVIALFEHVEEVASRNPKYEH-MVRLENYHFFAATMRPLKASEYVEQADKLEEASTTRYLEWLV---GYQFPVLTQFFAKVEDLVMT-VGAADVTYHEP--KRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSR-QELCTLCY 867
            G+  KAY +L+ A+F +VE+VAS + K    +V +EN+H   +T+  LK S    +  + ++  T     +++   G     L  FF  VE  V   V   +V+YH    K+ L   +K     K + +GL   ++++ KH+ +E  LL  +W  + D     +   ++L   CY
Sbjct:  599 GDLDKAYVKLIRAVFMNVEKVASESQKTPRDVVMMENFHHIFSTLSRLKISCLDAERREAKQKYTDHLQSYVINSLGQPLEKLNHFFEGVEARVAQGVREEEVSYHLAFNKQELRKVIKEYPG-KEVKKGLDNLYKKVDKHLCEEESLLQVVWHSMQDEFIRQYKHFEDLIGRCY 772          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Y9_ECTSI2.360e-22289.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUC5_9STRA2.090e-4337.54Exocyst complex component Sec3-domain-containing p... [more]
A0A7S3FZU7_9EUKA3.950e-1326.09Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A2P5VXM1_GOSBA2.330e-925.54Sec3-PIP2_bind domain-containing protein n=1 Tax=G... [more]
A0A7I8K836_SPIIN1.590e-823.04Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
UPI001402B0A01.520e-730.60exocyst complex component 1 isoform X1 n=4 Tax=Pet... [more]
A0A8C4N5F1_EPTBU1.070e-630.29Exocyst complex component 1 n=1 Tax=Eptatretus bur... [more]
A0A151PAH0_ALLMI2.230e-628.19Centrosomal protein of isoform B n=3 Tax=Alligator... [more]
A0A2D4LCQ4_9SAUR2.990e-630.68Sec3_C domain-containing protein (Fragment) n=1 Ta... [more]
A0A674NB58_TAKRU3.160e-628.00Sec3-PIP2_bind domain-containing protein n=1 Tax=T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1763contigEcto-sp13_S_contig1763:794..5532 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score658.7
Seed ortholog evalue1.9e-186
Seed eggNOG ortholog2880.D7G3Y9
Model size1281
KEGG koko:K18412,ko:K19983
Hectar predicted targeting categoryother localisation
GOsGO:0000145,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005546,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005938,GO:0006810,GO:0006887,GO:0006892,GO:0006893,GO:0008104,GO:0008150,GO:0008289,GO:0009987,GO:0016020,GO:0016192,GO:0017016,GO:0017048,GO:0017049,GO:0019899,GO:0031267,GO:0031503,GO:0032940,GO:0032991,GO:0033036,GO:0034613,GO:0034629,GO:0035091,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044448,GO:0044464,GO:0046903,GO:0048193,GO:0051020,GO:0051179,GO:0051234,GO:0051601,GO:0051641,GO:0070727,GO:0071944,GO:0098876,GO:0099023,GO:0099568,GO:1901981,GO:1902936
Exons7
EggNOG free text desc.exocyst localization
EggNOG OGsKOG2148@1,KOG2148@2759
Cds size1278
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019,ko03036,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1763.5329.1prot_Ecto-sp13_S_contig1763.5329.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1763 797..5532 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462916.345352-UTR-Ecto-sp13_S_contig1763:793..7961681462916.345352-UTR-Ecto-sp13_S_contig1763:793..796Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1763 794..796 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462916.3559554-CDS-Ecto-sp13_S_contig1763:796..10001681462916.3559554-CDS-Ecto-sp13_S_contig1763:796..1000Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1763 797..1000 +
1681462916.3651717-CDS-Ecto-sp13_S_contig1763:1287..14431681462916.3651717-CDS-Ecto-sp13_S_contig1763:1287..1443Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1763 1288..1443 +
1681462916.3753953-CDS-Ecto-sp13_S_contig1763:2265..24171681462916.3753953-CDS-Ecto-sp13_S_contig1763:2265..2417Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1763 2266..2417 +
1681462916.3883276-CDS-Ecto-sp13_S_contig1763:2785..28331681462916.3883276-CDS-Ecto-sp13_S_contig1763:2785..2833Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1763 2786..2833 +
1681462916.4002001-CDS-Ecto-sp13_S_contig1763:3590..37471681462916.4002001-CDS-Ecto-sp13_S_contig1763:3590..3747Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1763 3591..3747 +
1681462916.4096453-CDS-Ecto-sp13_S_contig1763:4103..42291681462916.4096453-CDS-Ecto-sp13_S_contig1763:4103..4229Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1763 4104..4229 +
1681462916.4197142-CDS-Ecto-sp13_S_contig1763:5097..55321681462916.4197142-CDS-Ecto-sp13_S_contig1763:5097..5532Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1763 5098..5532 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1763.5329.1

>prot_Ecto-sp13_S_contig1763.5329.1 ID=prot_Ecto-sp13_S_contig1763.5329.1|Name=mRNA_Ecto-sp13_S_contig1763.5329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=426bp
MLEVGFGELKVNFKRLASDLGDNPFDTLGVLALIEQAQLKQAHLVTLGIL
MEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQA
ASNAAIVGTRGNAKAKEQNEGGEAQKAYQRLVIALFEHVEEVASRNPKYE
HMVRLENYHFFAATMRPLKASEYVEQADKLEEASTTRYLEWLVGYQFPVL
TQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVILEGLKATHQ
RMVKHVTKEGQLLGPLWAKLSDTLFAMFSRQELCTLCYQHTLDPGAVAVK
RAATEIGGGGPPSRSGGNNNMPSSTNGGGSSSRIDDGEESGLASPSSAGG
RSFGGGSGAFGGSFSSLTSPTHAGRDSSGSGVFGTSGSGAHTPPGGGSRL
SSPRAGGGNSPVNRGKQFFAKHLRM*
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mRNA from alignment at Ecto-sp13_S_contig1763:794..5532+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1763.5329.1 ID=mRNA_Ecto-sp13_S_contig1763.5329.1|Name=mRNA_Ecto-sp13_S_contig1763.5329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4739bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1763:794..5532+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGATGCTGGAGGTAGGCTTCGGCGAGCTGAAGGTGAACTTCAAGCGCCT CGCGTCCGACCTAGGGGACAACCCCTTCGACACGCTCGGGGTCCTGGCCC TCATTGAGCAGGCGCAGCTGAAACAGGCGCATCTCGTTACCCTGGGCATC CTCATGGAATTCAAGGGGCTGCTCATGCACCGCTTCGGCAAGTTCATCAA GGACCAGGTGGGAGGGGGCTTGCCGCTGCTTTTTTCCTTTTTCCTGGTCT TGAACAATTCTCCTCATGTTGTTTTTTGCGGGGACAACAACGATACTCAA CATTACTTTTCCTGAAAGAAGGCCCCAAATTTTTTTTCTTGACGATAACA CAATCATTACTTCGAACAACCGTAATATATATGCGTCGAGTAGATATATA TATATATATATATTTCGTTTTTCTGGTACAATTTACCCTTAATCTTAATT ATCCGAAGGAAAAAAACAACTTATATTCTTTGCAAATGCCCCAGGTGTCG TGGATTCAAGCCCAGAGGGGCGACGCGAAGAAGGCGGGCATTCTCGCCGC CGTTGCGAAGGCCCCGACCCTGCTCAAGAGGCTCCAGGCGGCTTCCAACG CTGCCATCGTCGGCACCCGGGGCAATGCCAAGGCCAAGGAACAGAACGAG GTATGTGTGCGTGTGCATGACTATCGCTGTCTTCTTTTTTTTGTTGTAGT CGGATATGCTACTGCTGTCTACGTATGATTGCGACGAATGGGTTGTTTTT TGGTCGATTCGATTGTACTCTGTCAAGAGTAGCGGCAAGAGGTGTGCACG TCTCTGGCTGTCTCCTTTTTTTGGTCTGTCGGGTATGCTACTGCTGTGTA AGCATGAAAGTTTTACGTGTCTGTGTATGGCTGCGACGAATGAGTTCTTG TTTGGTTTGTACTACTGTGTTGAGAGAAGCGGCGAGAGGTGTGCGTGTGC ATGCCCCTTGACACAAGACCCTTTAATCGCGATTCTCCTCGATAGTATCA GACTATGGTGGTGTTTGCATGTCTACGGCGAATGAGTTTTTTGGTGTTTC GTCGATTCCGCTCATGCTGCCGTGGGTAACAGCAGTGAGAGGTGTGCATG TCTATGGCTCAACGAATGATTTTTTCGTTTTATTTTGTTTTTTGTGTTGT TTTTTCAATTGGTTTGTGACGTTAGCATTTCCCCCCCTCACGAAGACCTG ACTCAACGCTGGACGTAGCGGAAGGCAAGGTTTGCACGTCAAGCTTTCGA AGCAGGCGTGCCCCAAAAGCGCGTTCTGTATCACTCTGTCCGTTCTTGTG ACCGGTTGATGGACGAGCTTAAACGAGAAATGATGAGAGCAAGTGACTTC GAGGACGCAGCTCGATTTCGTGGAGCACTTTGACCTACCCCTACAGCCGT AGCCCTTCCGAGACCCCTAACGCTACAGTCGTCCCGGCCGCGTCTCTGTC CCCGCCGAACGGTTGGTGTCAGGGAGGGGAGGCCCAAAAGGCCTACCAGA GGTTGGTGATCGCACTGTTCGAGCACGTCGAAGAAGTCGCGTCTAGGAAC CCCAAGTACGAGCACATGGTTCGACTGGAGAACTACCACTTCTTCGCCGC CACGATGCGCCCGCTTAAGGCAAGGTGGACACCAGAGAGCGAGCGTGCTC GCCAAGACTAGCGCAATCCGCTCGCATTGTTGGGGTCGTTGGTGTTGTTG TTGTTGAAATTATTCGGTTATTGCTGGTGTTGTTGTTGCTTTTTGTTGTT GTTGGTGGCGATGGTGGTGGTGGTGTTTTTGCTTCTGGTCGTCAGATGCA GAGGTGGGATTTCCCGATTTCACAGCAGAACACAAGGACCGCAGCACGAA AGACCTGTTGCGTCACGTCACAAGCAGGCTGTGGCCAGGAAACAGCCAGA GAGCCCCTTTCGTCACGACGCGCTAACAGCATCCCTCTTGTTGGACTGCT GTACTGTGCGATACGCGACAAACCACAGGTGCACGTTTTGAGCGAGTACG TGGAGCAGGCGGACAAGCTGGAAGAAGCCTCTACCACGAGGTCAGTTCTT TCCTTACGCTATCGTACATTGTGCTACACGTAGGTGACGGAAGATATCAC ACCCCAGAACCCCTGACTCGATTTTCACGCCGTACTTGACAGAAGATATC GTATACCCTGGCCCGATTCTCAAGGCTCGGTTCTCATTCCAAGGCAGAAA GAGTGGCAGTGGTGAAGTTGGAACCGTCTCGTAGAGAGTTTTCCAAGATG GTATCGTTTGATTTATGAATCCACTTCGTGGTGGACTATGCAATCGAGTA CTCACGGAACCGAAACAAATGCACCAACTTTTGACGTAACGGCACGTTCC AGAAGTTCATGTGGTCTCGCCGCAGTTTACGGTTCCTGGAGTGGCTGGCG GGCTCGCCTGGGAGAAAAGATGGGGAAGTGACCAAAGTTAAAGAAGGAAA ATGAAATGTAATACTTGTAACACAAGAAACGCAAGAAATATCGCCAGCGT GCGAAAGTGTAGGAAGGGAACATCTTGTCTGATCCGCGCAAGTGTACCTG GAGTGGATGGCGGGCTAGCCTTGGACAAAAGAGAGGACACTGATCAACAA GACAAGGACAAAACAAAGCAAGAGACACTAAGTCTAAACGCCAGAAATAC CGCCAACGTGCGACAATTTACGGCTACAGCTTGGTTCTTGTCTGGTTGGC GGCGTAGTCACCCTAGACAACAAGACTTTTCCCAGAAAGGTGATGTCCGC ACGGGACCACCCCTTCACACTTGTGCATATGGTATTCTCCCGCGCAGGTA CCTGGAATGGCTGGTAGGCTACCAGTTCCCCGTCCTAACGCAGTTCTTCG CCAAGGTGGAAGACCTTGTCATGACGGTGGGAGCGGCGGACGTGACCTAC CACGAGCCGAAACGCAACCTAGAGGCTACGCTCAAGAGGCAGGGGGACAT GAAGGTCTGCTTGGCAGTGCTGCTTTTCTTGCTTTTTTTGTCTCTTGTCT ACACACTTCAAAATCAGCGCTCACAGCACTCGTGCTCTTTACTCTTACCC GTGGTCACACAGGAATATGTTTGTTTCGATGCTTTCAGGAGTGCAGTTCG TAGTCATGGTCTGTGTGGTCAATGTTGGTCTTTTTCTCACACCATTCCGC TTTCCGATGCGCCCGTATTTCTGATTTCTTATCTTTCTTTCAATACTTTC AGGAAGTGCAGGTCGTAGTTATGGTCTGTGTGGTCAATGTTTGTCTTTAT CTCGCACCATTCCGCTATCCAATACACCTACGTTTCTGAATTTTTTGGGG CGGGGGGCAGGTAATTTTGGAAGGGTTGAAGGCGACACACCAGCGGATGG TCAAGCACGTGACCAAAGAGGGCCAGCTGTTGGGACCGCTGTGGGCGAAG CTCTCCGACACGCTGTTTGCCATGTTCTCGAGGCAAGTCAAAACAGAAAT AAAGTGGTTTGCACCGACGTGTTGCGGAGTAGATTTGATACGCATCCTAT GCGATATGGGAAGGGTGTACCACCACCACCCAGGAGGGTGATGGCGGCTC CCTCCGTCACGGTAGGGGAGATCCCAGTATTGATAGGTGTTCCGAAAATG TTCCTTGTTGTGGTTTCCAGAGTTCTGGAATGGTTCGCCGGGTAGGTCGA TACATACCTCCCCCGGCCCCGAACACGAGCGAGCATTTTATAGGTTCTTT TAACGACCCTCGCAGCTCGCATGAAGATGTACCAACCGTTGGACAGTCAC AATGGATGTAAACAGACGGTCACAGCTGGATTGAAAGACACCGCGATTGA GGCCAATTGTTACCATGAGATGGAGACACTGCCTGTGCGCTGCTTCACGT TTTTTTGCCTGAGAAAAGTAGTGGTACTTGCATAATGCCGCATCGTTTGG GCCGGTCGCCCTGGTAAAATCGCGAAACACAGAGACAAACATTGAACCTG GGTCGTACTCTTGAGCATCCCCAGGCGCATCTCTTGGCACTACTACATAT GTGGCTTTCCGCAAGGGAGCAGGGTCGTCAGGGAGATGAAGGGCGTTGGT TTTTGCGGCAGTAGTTGGTTATCATTGGACATGATTGTGGAGACCTACGG TAGACGGGAAAAGGGCAACGTCAACGCTATGCCAACCCGAAACCCGGTTT CTTCAAGGCTAACGTTTTGTAGTATATTTATCTCCCTCATTTGTTTTCGG TTCAAGCGGTTCAGTGCCCGTGTCCTCAATGCGACTTGTCACCTCGAAAA CGAAACAACAACAACAACAACAATGACAATGACAATGACAATACCAGGTA CGAGGAGCTCTGCACGCTGTGCTACCAGCACACCCTCGACCCGGGAGCCG TCGCCGTGAAGCGGGCGGCCACCGAGATCGGCGGCGGCGGGCCCCCGTCC CGCAGCGGCGGCAACAACAACATGCCAAGCTCCACCAACGGCGGAGGAAG CTCTTCCCGCATAGACGACGGCGAAGAGAGCGGCCTCGCGTCCCCCTCCT CCGCCGGCGGCCGGAGCTTTGGCGGCGGTAGCGGCGCCTTCGGTGGATCA TTCTCTAGCCTAACGTCGCCGACGCACGCGGGCCGAGACAGCTCCGGGTC CGGGGTGTTTGGTACTTCGGGGAGCGGGGCGCACACGCCTCCCGGCGGGG GGAGCAGGTTGTCGTCGCCGAGAGCCGGCGGGGGTAACTCTCCTGTAAAT CGCGGGAAGCAGTTCTTTGCGAAGCACCTGCGCATGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1763:794..5532+

>mRNA_Ecto-sp13_S_contig1763.5329.1 ID=mRNA_Ecto-sp13_S_contig1763.5329.1|Name=mRNA_Ecto-sp13_S_contig1763.5329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1278bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1763:794..5532+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGGAGGTAGGCTTCGGCGAGCTGAAGGTGAACTTCAAGCGCCTCGC
GTCCGACCTAGGGGACAACCCCTTCGACACGCTCGGGGTCCTGGCCCTCA
TTGAGCAGGCGCAGCTGAAACAGGCGCATCTCGTTACCCTGGGCATCCTC
ATGGAATTCAAGGGGCTGCTCATGCACCGCTTCGGCAAGTTCATCAAGGA
CCAGGTGTCGTGGATTCAAGCCCAGAGGGGCGACGCGAAGAAGGCGGGCA
TTCTCGCCGCCGTTGCGAAGGCCCCGACCCTGCTCAAGAGGCTCCAGGCG
GCTTCCAACGCTGCCATCGTCGGCACCCGGGGCAATGCCAAGGCCAAGGA
ACAGAACGAGGGAGGGGAGGCCCAAAAGGCCTACCAGAGGTTGGTGATCG
CACTGTTCGAGCACGTCGAAGAAGTCGCGTCTAGGAACCCCAAGTACGAG
CACATGGTTCGACTGGAGAACTACCACTTCTTCGCCGCCACGATGCGCCC
GCTTAAGGCAAGCGAGTACGTGGAGCAGGCGGACAAGCTGGAAGAAGCCT
CTACCACGAGGTACCTGGAATGGCTGGTAGGCTACCAGTTCCCCGTCCTA
ACGCAGTTCTTCGCCAAGGTGGAAGACCTTGTCATGACGGTGGGAGCGGC
GGACGTGACCTACCACGAGCCGAAACGCAACCTAGAGGCTACGCTCAAGA
GGCAGGGGGACATGAAGGTAATTTTGGAAGGGTTGAAGGCGACACACCAG
CGGATGGTCAAGCACGTGACCAAAGAGGGCCAGCTGTTGGGACCGCTGTG
GGCGAAGCTCTCCGACACGCTGTTTGCCATGTTCTCGAGGCAAGAGCTCT
GCACGCTGTGCTACCAGCACACCCTCGACCCGGGAGCCGTCGCCGTGAAG
CGGGCGGCCACCGAGATCGGCGGCGGCGGGCCCCCGTCCCGCAGCGGCGG
CAACAACAACATGCCAAGCTCCACCAACGGCGGAGGAAGCTCTTCCCGCA
TAGACGACGGCGAAGAGAGCGGCCTCGCGTCCCCCTCCTCCGCCGGCGGC
CGGAGCTTTGGCGGCGGTAGCGGCGCCTTCGGTGGATCATTCTCTAGCCT
AACGTCGCCGACGCACGCGGGCCGAGACAGCTCCGGGTCCGGGGTGTTTG
GTACTTCGGGGAGCGGGGCGCACACGCCTCCCGGCGGGGGGAGCAGGTTG
TCGTCGCCGAGAGCCGGCGGGGGTAACTCTCCTGTAAATCGCGGGAAGCA
GTTCTTTGCGAAGCACCTGCGCATGTGA
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