mRNA_Ecto-sp13_S_contig1763.5329.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: D7G3Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Y9_ECTSI) HSP 1 Score: 653 bits (1684), Expect = 2.360e-222 Identity = 385/431 (89.33%), Postives = 390/431 (90.49%), Query Frame = 1
Query: 1 RMLEVGFGELKVNFKRLASDLGDNPFDTLGVLALIEQAQLKQAHLVTLGILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAIVGTRGNAKAKEQNEGGEAQKAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLKA---SEYVEQADKLEEASTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSR-QELCTLCYQHTLDPGAVAVKRAATEIGXXXXXXXXXXXXXXXXXXXXXXXXXRI-DDGEESGLASPSSAGGRSFGGGSGAFGGSFSSLTSPTHAGRDSSXXGVFGTSGSGAHTPPGGGSRLSSPRAGGGNSPVNRGKQFFAKHLRM 1278
+MLEVGFGELK AQLKQAHLVTLGILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAA+VGTRGNAKAKEQ+EGGEAQKAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLK SEYVEQADKLEE STTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVI EGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSR +ELCTLCYQHTLDPGAVAVKRAATEIGXXXXXXXXXXXXXXXXXXXXXXXXX DDGEESGLASPSSAGGRSFGGGSGAFGGSFSSLTSPTH GRDSS GVFG SGSGAHTPPGGGS LSSPRAGGGNSPV+RGKQFFAKHLRM
Sbjct: 819 KMLEVGFGELK--------------------------AQLKQAHLVTLGILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAVVGTRGNAKAKEQDEGGEAQKAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLKVQVLSEYVEQADKLEEVSTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVISEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSRYEELCTLCYQHTLDPGAVAVKRAATEIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDGEESGLASPSSAGGRSFGGGSGAFGGSFSSLTSPTHTGRDSSGSGVFGVSGSGAHTPPGGGSGLSSPRAGGGNSPVHRGKQFFAKHLRM 1223
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A835YUC5_9STRA (Exocyst complex component Sec3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUC5_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.090e-43 Identity = 107/285 (37.54%), Postives = 156/285 (54.74%), Query Frame = 1
Query: 67 DNPFDTLGVLALIEQAQLK---QAHLVTLGILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAIVGTRGNAKAKEQNEGGEAQKAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAAT--MRPLKASE-YVEQADKLEEASTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSR-QELCTLCYQHTLDPGAVAV 900
D D LG L ++++A + + H+ +++EFK +L+ +F KFI +QV W+Q + DAK+ G+LA AK P+L+ R+Q A NPKY +++++EN +FF T +R + E YV QA + ++ YLEW++ QFP FFA++E+LV +VGA DV YHEPK+NL+A LKR D K + +GLK + RM KH++KE LL LW L+D LFA FSR +ELC +CY + P A V
Sbjct: 706 DQVSDMLGALTVLDEAHGRADCENHIAA-HVILEFKVILVGKFNKFIGEQVLWVQNSKTDAKRPGVLAPFAKLPSLVDRMQ------------------------------------------TAQANPKYANVIKMENLYFFKHTIGLRDVPVLEDYVLQASSNFDTTSQNYLEWVLRCQFPHAMAFFARIEELVASVGAQDVPYHEPKKNLDAMLKRHLDEKTVPDGLKLIYARMNKHLSKESCLLPVLWDHLNDMLFAQFSRYEELCHVCYGFKMVPSASQV 947
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A7S3FZU7_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3FZU7_9EUKA) HSP 1 Score: 80.9 bits (198), Expect = 3.950e-13 Identity = 66/253 (26.09%), Postives = 118/253 (46.64%), Query Frame = 1
Query: 142 LGILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAIVGTRGNAKAKEQNEGGEAQKAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLKAS--------EYVEQADKLEEASTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEP--KRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMF-SRQELCTLCY 867
+ +L++ K L F +FI Q+S + + +++ G+L K PT +++L++ +G R A +Y +L++ LFE ++ +A + KY H+V++EN+H F+A+MR + S +YV+QADK YL W++ + +F V ++ + A+++ Y E K L L G + + L +RM KH++ E L L L L + S + CY
Sbjct: 93 INMLLQVKFSLQSVFTRFIDAQISAMGELKPNSRYCGVLLPFKKFPTFVRKLESQMP---MGRRQPI----------ADSSYSKLIVRLFEWLDGIARQEEKYYHIVKMENFHHFSASMREVLQSCPGLESVRDYVKQADKKYGEHEQAYLNWIIHDGIGKVQEFCNGVTEMRDALSASEIQYQEAFSKDKLRRLLADVGGRNKVHKALADMKKRMEKHLSVEENLHPKLCDLLQSKLKTLLDSLLSILVECY 332
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A2P5VXM1_GOSBA (Sec3-PIP2_bind domain-containing protein n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5VXM1_GOSBA) HSP 1 Score: 70.9 bits (172), Expect = 2.330e-9 Identity = 59/231 (25.54%), Postives = 111/231 (48.05%), Query Frame = 1
Query: 181 RFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAIVGTRGNAKAKEQNEGGEAQ----KAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLK-----ASEYVEQADKLEEASTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVT------YHEP------KRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAK 810
+F KF+ + I+ + ++ G+L+ + + TL R+ EQ G+++ +AY + V +F +E++A +PKY + LENY F ++ L +++ QA + E + TR++ ++ YQF L QF K+EDL+ T+ A +V+ + P K +L LK + + + + A ++++ K++T E +LL LW K
Sbjct: 809 QFSKFVDEACHQIERNERNVRQMGVLSYIPRFATLATRM------------------EQYIQGQSRDLVDQAYTKFVSVMFATLEKLAQTDPKYADIFLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARKIEDLMFTISAEEVSMLLIVLFQIPFQLGLSKMDLRKMLK--SSLSGVDKSITAMYKKLQKNLTSE-ELLPSLWDK 1018
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A7I8K836_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K836_SPIIN) HSP 1 Score: 68.2 bits (165), Expect = 1.590e-8 Identity = 53/230 (23.04%), Postives = 111/230 (48.26%), Query Frame = 1
Query: 148 ILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAIVGTRGNAKAKEQNEGGEAQ----KAYQRLVIALFEHVEEVASRNPKYEHMVRLENYHFFAATMRPLK-----ASEYVEQADKLEEASTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAK 810
+L + + + +F KF+ + I+ + ++ G+L+ + + TL R+ EQ G+++ +AY + V +F +E++A +PK +V LENY F ++ L +++ QA + E + TR++ ++ QF + QF K+E+L+ T+ A +V+Y ++ + + + + L ++++ K++T E +LL LW K
Sbjct: 642 LLDDLETRISDQFTKFVDEACRQIERNERNVRQMGVLSYIPRFATLATRM------------------EQYIQGQSRDLVDQAYTKFVSIMFVTLEKIAQADPKSADIVLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHITAIIYLQFERMFQFARKIEELLYTIPAEEVSYQIGLSKMDMRKTIKASLSNVDKSLANMYRKLQKNLTSE-ELLSSLWDK 852
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: UPI001402B0A0 (exocyst complex component 1 isoform X1 n=4 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001402B0A0) HSP 1 Score: 65.1 bits (157), Expect = 1.520e-7 Identity = 56/183 (30.60%), Postives = 89/183 (48.63%), Query Frame = 1
Query: 367 GEAQKAYQRLVIALFEHVEEVASRNPKYEH-MVRLENYHFFAATMRPLKASEY-VEQADKLEEAST--TRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHE---PKRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSRQE-LCTLCYQHTLDPGA 891
G+ KAY RL+ A+F++VE+VA+ + K +V +ENYH AT+ LK S E+ D + + Y+ +G P L FF VE V AD ++ K+ L L R+ K + GL+ ++++ KH+ +E LL +W + + + E L + CY PGA
Sbjct: 724 GDLDKAYARLIRAVFDNVEKVAAESQKTPRDVVLMENYHHLFATLSRLKISSLDAERRDAKNKYAEHLQAYVTSYLGQPLPKLNVFFEGVEARVAQGVKADEVGYQLMFSKQELRKVL-REYPGKEVKRGLENLYKKVDKHLCEEENLLQVVWHSMQEEFIRQYKHFEGLISRCY-----PGA 900
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A8C4N5F1_EPTBU (Exocyst complex component 1 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4N5F1_EPTBU) HSP 1 Score: 62.4 bits (150), Expect = 1.070e-6 Identity = 53/175 (30.29%), Postives = 83/175 (47.43%), Query Frame = 1
Query: 367 GEAQKAYQRLVIALFEHVEEVASRNPKY-EHMVRLENYHFFAATMRPLKAS--EYVEQADKLEEASTTR-YLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHE---PKRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSR-QELCTLCY 867
GE KAY +L+ A+F +E+ A +PK + +V +ENYH AT+ LK E + K E A Y+ +G P L +FF VE V D ++ K+ L L R+ K + +GL+ ++++ KH +E LL +W L + + +EL CY
Sbjct: 677 GELDKAYSKLIAAIFVALEKAALESPKTPKDVVLMENYHHLFATLSRLKIGCLENERRDAKHEYADHLHAYVISSLGQPLPKLNEFFEGVEVRVAQGVKEDEVGYQLAFSKQELRKVL-REYPGKEVKKGLENLYRKVEKHFCEEENLLQVVWRSLQEEFIRQYKHFEELIARCY 850
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A151PAH0_ALLMI (Centrosomal protein of isoform B n=3 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151PAH0_ALLMI) HSP 1 Score: 61.6 bits (148), Expect = 2.230e-6 Identity = 53/188 (28.19%), Postives = 90/188 (47.87%), Query Frame = 1
Query: 367 GEAQKAYQRLVIALFEHVEEVASRNPKYEH-MVRLENYHFFAATMRPLKASEYVEQADKLEEASTTR---YLEWLVGYQFPVLTQFFAKVEDLVMT-VGAADVTYHEP--KRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSRQE-LCTLCYQHTLDPGAVAVKR 906
G+ KAY +L+ A+F +VE+VA+ + K +V +EN+H AT+ LK S + + ++ T Y+ + +G L FF VE V V +V+Y K+ L +K K + +GL ++++ KH+ +E LL +W + D + E L CY PG+ A ++
Sbjct: 705 GDLDKAYLKLITAVFFNVEKVANESQKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNHFFEGVEARVAQGVREEEVSYQLAFNKQELRKVIKEYPG-KEVKKGLDNLYKKVDKHLCEEENLLQVVWHSMQDEFIRQYKHFEGLIARCY-----PGSAAERK 886
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A2D4LCQ4_9SAUR (Sec3_C domain-containing protein (Fragment) n=1 Tax=Micrurus spixii TaxID=129469 RepID=A0A2D4LCQ4_9SAUR) HSP 1 Score: 60.8 bits (146), Expect = 2.990e-6 Identity = 54/176 (30.68%), Postives = 84/176 (47.73%), Query Frame = 1
Query: 367 GEAQKAYQRLVIALFEHVEEVASRNPKYEH-MVRLENYHFFAATMRPLKASEYVEQADKLEEASTTRYLEWLV----GYQFPVLTQFFAKVEDLVMT-VGAADVTYHEP--KRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSRQE-LCTLCY 867
G+ KAY +L+ A+F +VE+VA+ + K +V +EN+H AT+ LK S +E K + T YL+ V G L FF VE V V +V+Y K+ L +K K + +GL ++++ KH+ +E LL +W + D + E L CY
Sbjct: 502 GDLDKAYLKLIRAVFANVEKVANESQKTPRDVVMMENFHHIFATLSRLKIS-CLEAEKKEAKQQYTDYLQLYVIYSLGQPLEKLNHFFEGVEARVAQGVREEEVSYQLAFSKQELRKVIKEYPG-KEVKKGLDNLYRKVDKHLCEEENLLQVVWHSMQDEFIRQYKHFEGLIARCY 675
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Match: A0A674NB58_TAKRU (Sec3-PIP2_bind domain-containing protein n=1 Tax=Takifugu rubripes TaxID=31033 RepID=A0A674NB58_TAKRU) HSP 1 Score: 60.8 bits (146), Expect = 3.160e-6 Identity = 49/175 (28.00%), Postives = 85/175 (48.57%), Query Frame = 1
Query: 367 GEAQKAYQRLVIALFEHVEEVASRNPKYEH-MVRLENYHFFAATMRPLKASEYVEQADKLEEASTTRYLEWLV---GYQFPVLTQFFAKVEDLVMT-VGAADVTYHEP--KRNLEATLKRQGDMKVILEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSR-QELCTLCY 867
G+ KAY +L+ A+F +VE+VAS + K +V +EN+H +T+ LK S + + ++ T +++ G L FF VE V V +V+YH K+ L +K K + +GL ++++ KH+ +E LL +W + D + ++L CY
Sbjct: 599 GDLDKAYVKLIRAVFMNVEKVASESQKTPRDVVMMENFHHIFSTLSRLKISCLDAERREAKQKYTDHLQSYVINSLGQPLEKLNHFFEGVEARVAQGVREEEVSYHLAFNKQELRKVIKEYPG-KEVKKGLDNLYKKVDKHLCEEESLLQVVWHSMQDEFIRQYKHFEDLIGRCY 772 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1763.5329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1763.5329.1 >prot_Ecto-sp13_S_contig1763.5329.1 ID=prot_Ecto-sp13_S_contig1763.5329.1|Name=mRNA_Ecto-sp13_S_contig1763.5329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=426bp MLEVGFGELKVNFKRLASDLGDNPFDTLGVLALIEQAQLKQAHLVTLGILback to top mRNA from alignment at Ecto-sp13_S_contig1763:794..5532+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1763.5329.1 ID=mRNA_Ecto-sp13_S_contig1763.5329.1|Name=mRNA_Ecto-sp13_S_contig1763.5329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4739bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1763:794..5532+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1763:794..5532+ >mRNA_Ecto-sp13_S_contig1763.5329.1 ID=mRNA_Ecto-sp13_S_contig1763.5329.1|Name=mRNA_Ecto-sp13_S_contig1763.5329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1278bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1763:794..5532+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |