prot_Ecto-sp13_S_contig17624.5327.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17624.5327.1
Unique Nameprot_Ecto-sp13_S_contig17624.5327.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17624.5327.1 vs. uniprot
Match: D7G636_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G636_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 3.720e-23
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0 
Query:    1 VQRLQQRVSEGEFYEALQLYKTSYSRLKAQGKLDDAEELLTAGAIAMSKENEV 53
            VQRLQQRVSEGEFYEALQLYKTSYSRLKAQG+LDDAEELLTAGAIAMSKENE+
Sbjct:   15 VQRLQQRVSEGEFYEALQLYKTSYSRLKAQGRLDDAEELLTAGAIAMSKENEL 67
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BLAST of mRNA_Ecto-sp13_S_contig17624.5327.1 vs. uniprot
Match: A0A7S1CAX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAX0_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 5.920e-5
Identity = 23/52 (44.23%), Postives = 37/52 (71.15%), Query Frame = 0 
Query:    2 QRLQQRVSEGEFYEALQLYKTSYSRLKAQGKLDDAEELLTAGAIAMSKENEV 53
            ++L+  V+ G+FY ALQ+YKT YSR  A+G+  +AE LL+ GA+ M +  ++
Sbjct:   36 EKLKASVAGGDFYSALQMYKTLYSRKNARGRHAEAEALLSEGALVMLEHGQL 87
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BLAST of mRNA_Ecto-sp13_S_contig17624.5327.1 vs. uniprot
Match: A0A196SFJ4_BLAHN (Uncharacterized protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SFJ4_BLAHN)

HSP 1 Score: 47.8 bits (112), Expect = 9.480e-5
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0 
Query:    2 QRLQQRVSEGEFYEALQLYKTSYSRLKAQGKLDDAEELLTAGAIAMSKENE 52
            Q L+ ++SEG +YEALQLYK+  SR +A GK  + +EL   G + M+K N+
Sbjct:   14 QTLETQMSEGNYYEALQLYKSLQSRYEAAGKFKELDELSYHGIVNMNKHNQ 64
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17624.5327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G636_ECTSI3.720e-2396.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1CAX0_9STRA5.920e-544.23Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A196SFJ4_BLAHN9.480e-547.06Uncharacterized protein n=1 Tax=Blastocystis sp. s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..54
e-value: 1.8E-13
score: 52.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17624contigEcto-sp13_S_contig17624:3460..3636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17624.5327.1mRNA_Ecto-sp13_S_contig17624.5327.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17624 3460..3636 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17624.5327.1 ID=prot_Ecto-sp13_S_contig17624.5327.1|Name=mRNA_Ecto-sp13_S_contig17624.5327.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
VQRLQQRVSEGEFYEALQLYKTSYSRLKAQGKLDDAEELLTAGAIAMSKE
NEVYWDLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf