mRNA_Ecto-sp13_S_contig17623.5326.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17623.5326.1
Unique NamemRNA_Ecto-sp13_S_contig17623.5326.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17623.5326.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 1.880e-67
Identity = 241/498 (48.39%), Postives = 287/498 (57.63%), Query Frame = 2 
Query:  119 MPGYEDRASILQDLGDMIFKLVSDRATPQQWAEWLRVPLEHAARTANHDLVDKLLKSGADGGAGWCGCSGRTLLHASAQGGSTHVVSAMIRAGANPDKDIAQVNTGHTPLHCAIIGGHRAAAKVLMMAGANVNIVDVKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANFPCPKHSGALLHVAARYDRTGAIPLLVEAGADIEARCDKGQTPLFVASFFGSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRWEADETALDNKNKTASARIPD-ITQAAEDDRPELHRLSKLLAQAARDKAWRRRGIIVMCYAHLGRARVAVDIPESEANGRSSRRARRRNVKMEVVVGGSQDKGHRIGPSPEGM----GRAQRRAGGVGDPAGGFDDVMAWLMTLTVGKEVVSEHAATNHPHDGIFRKIVGFL 1597
            MPGYE+RASILQDLGD IFKLV DRATP+QWAEWLR PLEHAA T N DLVDKLL +GA+ GAGW GC G+TLLHA+A+GG+ HV++++ RAGA  D     ++TGHTPL  A+IGG  AAAK L+MAGA+VN +D  N+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                    +F        LLHVAA+ +R  AIP L EAG +IE R   G+TPL  A+ + S  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                +T  +R+   + +++E  RP   R+SKLLA+A +D+AWRRRG +V+C AH  R R+AV IP + A      + R R                              RA+  A   G   G FD   AW+M LT                + +FRKIVGFL
Sbjct:    1 MPGYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVVLALGEKGVDLNCLNSKGETPLRLAVRGDHVTTVKVLLSEGADPHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLRYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQGMAESSEARRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVKIPAAAAEATEGLQERPRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGARARIEAAREGTVCG-FDGFSAWMMALT---------------EENLFRKIVGFL 482
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BLAST of mRNA_Ecto-sp13_S_contig17623.5326.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 1.490e-51
Identity = 93/148 (62.84%), Postives = 114/148 (77.03%), Query Frame = 2 
Query:   95 ELRSEINGMPGYEDRASILQDLGDMIFKLVSDRATPQQWAEWLRVPLEHAARTANHDLVDKLLKSGADGGAGWCGCSGRTLLHASAQGGSTHVVSAMIRAGANPDKDIAQVNTGHTPLHCAIIGGHRAAAKVLMMAGANVNIVDVKNN 538
            E+R   + +PGYE+R+SILQDLGD  FKLV DRATP QWAEWLR PLEHAA T N DLVDKLL +GA+GGAGW GC G+TLLHA+A+GG+  V++ +  AGA  D     ++TGHTPL  A+IGG  AAAK L+MAGANVN++D  N+
Sbjct:   35 EVRHTSSIIPGYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATND 182
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BLAST of mRNA_Ecto-sp13_S_contig17623.5326.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 1.250e-41
Identity = 197/392 (50.26%), Postives = 229/392 (58.42%), Query Frame = 2 
Query:  119 MPGYEDRASILQDLGDMIFKLVSDRATPQQWAEWLRVPLEHAARTANHDLVDKLLKSGADGGAGWCGCSGRTLLHASAQGGSTHVVSAMIRAGANPDKDIAQVNTGHTPLHCAIIGGHRAAAKVLMMAGANVNIVDVKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANFPCPKHSGA----LLHVAARYDRTGAIPLLVEAGADIEARCD-KGQTPLFVASFFGSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRWEADETALDNKNKTASARIPDITQAAEDDRPELHRLSKLLAQAARDKAWRRRGIIVMCYAH 1279
            M  ++DR S L   GDMI  LV D ATP+QW +WLRVPLEHAA T N  LV+KLLK GA+  AGW GC GRTL+HA A+GGS  V+S + RAGA    +     +G TPLH A+ GG  AA KVLM+AGA+VN +D     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                         P  K   A    L           A+  L++ GAD+ A+C   G T L  A    +                                      LLLRW ADETA+D    T SA IP I +A E++ P + RL+KLL  A +D+ WRRRG++VMC AH
Sbjct:    1 MSTHQDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCHALDAGHISTVNVSLGWGCLWLEPTSKTCIAGRPPLCVSTFSISYFAAMLALLKLGADLHAKCPHNGMTALHTACHVVN---------------------------------PDAADLLLRWGADETAVDWNGATTSAVIPRIDEAPEENGPAILRLTKLLKFADQDRTWRRRGLLVMCRAH 359
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BLAST of mRNA_Ecto-sp13_S_contig17623.5326.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 2.640e-40
Identity = 81/132 (61.36%), Postives = 95/132 (71.97%), Query Frame = 2 
Query:  131 EDRASILQDLGDMIFKLVSDRATPQQWAEWLRVPLEHAARTANHDLVDKLLKSGADGGAGWCGCSGRTLLHASAQGGSTHVVSAMIRAGANPDKDIAQVNTGHTPLHCAIIGGHRAAAKVLMMAGANVNIVD 526
            EDR  IL D  DMIFKL+ DRAT +QW EWLR PLEHAA TAN DLV+KLLK+GADG AGW GC   TLLHA+       VV+A+IRAGA  D +     TG TPLH A++ G  AAA+VL++AGA+VN VD
Sbjct:    9 EDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVD 140
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BLAST of mRNA_Ecto-sp13_S_contig17623.5326.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 3.610e-39
Identity = 81/133 (60.90%), Postives = 99/133 (74.44%), Query Frame = 2 
Query:  131 EDRASILQDLGDMIFKLVSDRATPQQWAEWLRVPLEHAARTANHDLVDKLLKSGADGGAGWCGCSGRTLLHASAQGGSTHVVSAMIRAGANPDKDIAQVN-TGHTPLHCAIIGGHRAAAKVLMMAGANVNIVD 526
            EDRA  L D   +IFKL+ DRAT +QWAEWLR PLEHAA TAN DLV+KLLK+GADG AGW GC  +TLLHA+A+GG+  VV+A++RAGA  D +   +   G TPLH A+  G  AAA+VLM+AGA+VN  D
Sbjct:    9 EDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAAD 141
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BLAST of mRNA_Ecto-sp13_S_contig17623.5326.1 vs. uniprot
Match: D7G292_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G292_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 3.820e-39
Identity = 194/363 (53.44%), Postives = 235/363 (64.74%), Query Frame = 2 
Query:  251 TANHDLVDKLLKSGADGGAGWCGCSGRTLLHASAQGGSTHVVSAMIRAGANPDKDIAQVNTGHTPLHCAIIGGHRAAAKVLMMAGANVNIVDVKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANFPCPKHS-GALLHVA---ARYDRTGAIPLLVEAGADIEARCDKGQTPLFVASFFGSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRWEADETALDNKNKTA-SARIPDITQAAEDDRPELHRLSKLLAQAARDKAWRRRGIIVMCYAHLGRARVAVDIPESEA 1324
            T N DLVDKLL +GA+GGAGW GC G+TLLHA+A+GG+  V++ + RAGA  D     ++TGHTPL  A++GG  AAA+ L+MAGA+VN++D KN+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                        +  C  +  G  LHVA   +  ++  AI  L EAGADIE    +G+TPL  A+  GS A  XXXXXXXXXXXXXXXXXXXXXX            LLLRW ADETA++ + +T  S  I  I +A E   P L R+SKLLA+A +D+AWRRRG +V+C AH  R R+AV+IP + A
Sbjct:   48 TGNRDLVDKLLGAGANGGAGWRGCDGKTLLHAAAEGGNVPVIARLRRAGAGGDMKAKTLDTGHTPLDLAVVGGKAAAAEALIMAGADVNVLDSKNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKGI-----------------------------------DLNCLNYKRGTPLHVAKIRSAPEQRAAIRALFEAGADIEGPGIRGRTPLRHAARSGSYAAIXXXXXXXXXXXXXXXXXXXXXXCACFFCHHDAADLLLRWGADETAVNLEGETVVSMVIRRIAEALETRCPPLERVSKLLARAPQDRAWRRRGFLVLCRAHRDRVRLAVEIPVAAA 375
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BLAST of mRNA_Ecto-sp13_S_contig17623.5326.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 3.080e-34
Identity = 79/134 (58.96%), Postives = 97/134 (72.39%), Query Frame = 2 
Query:  131 EDRASILQDLGDMIFKLVSDRATPQQWAEWLRVPLEHAARTANHDLVDKLLKSGADGGAGWCGCSGRTLLHASAQGGSTH-VVSAMIRAGANPDKDIAQVNTGH-TPLHCAIIGGHRAAAKVLMMAGANVNIVD 526
            EDRA IL D  DMIF+L+ DRAT +QWAEWLR PLEHAA TAN DLV+KLLK+GA+G AG  GC   TLLHA+A+GG+   VV+A+I+AGA  D +   V     TPLH A+  G  AAA+ +M+AGA+VN  D
Sbjct:   11 EDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAAD 144
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BLAST of mRNA_Ecto-sp13_S_contig17623.5326.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 7.290e-33
Identity = 148/510 (29.02%), Postives = 198/510 (38.82%), Query Frame = 2 
Query:  119 MPGYEDRASILQDLGDMIFKLVSDRATPQQWAEWLRVPLEHAARTAN------------HDLVDKLLKSGADGGAGWCGCSGRTLLHASAQGG--STHVVSAMIRAGANPDKDIAQVNTGHTPLHCAIIGGHRAAAKVLMMAGANVNIVDVKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANFPCPKHSGALLHVAARYDRTGAIPLLVEAGADIEARCDKGQTPLFVASFFGSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRWEADETALDNKNKTASARI-PDITQAAEDDRPELHRLSKLLAQAARDKAWRRRGIIVMCYAHLGRARVAVDIPESEANG--RSSRRARRRNVKMEVVVGGSQDKGHRIGPSPEGMGRAQRRAGGVGDPAGGFDDVMAWLMTLTVGKEVVSEHAATNHPHDGIFRKIVGFL 1597
            MPGY++R+SILQDLGD IFKLV D ATP+QWAEWLR PLEHAA T              H  +D  +  G +  A       + L+ A A G      V   ++ +GANP   I   + G+ P+H A   G       ++  G ++N ++ K                                                                                                      ALL +AA  ++  AI +L EAGADIEAR    Q    V S    R                                     LLL W  DE A+D++ +T    +   I +A    RP L RLS+LLA+A +D+AWRRRG +V+   H  R R+AV+IP + A+   +  +R RRR    +V V G+   G   G S  G+ RA   A   G  AG F  V AW+M LT                +G+FR+IVGFL
Sbjct:    1 MPGYKERSSILQDLGDTIFKLVCDWATPEQWAEWLRAPLEHAAATGAGGDIKAKAPHTWHTPLDLTVTGGKEAAA-------KALIMAGADGHMWEHRVAKDLLLSGANP---IQAGSNGNFPIHLAACHGLDEVVLAVVEKGIDLNCLNNKREIPLLL-----------------------------------------------------------------------------------------------ALLRIAACENKAAAIRVLFEAGADIEARLTLFQLGAKVNSKENERITSLSSACSFGNHDAAG--------------------LLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQQRPRRRASTGQVEVDGTNGGGGXTGAS-SGV-RAGIEAVHEGTVAG-FGGVSAWMMALT---------------EEGVFRRIVGFL 367
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BLAST of mRNA_Ecto-sp13_S_contig17623.5326.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.060e-32
Identity = 73/133 (54.89%), Postives = 96/133 (72.18%), Query Frame = 2 
Query:  128 YEDRASILQDLGDMIFKLVSDRATPQQWAEWLRVPLEHAARTANHDLVDKLLKSGADGGAGWCGCSGRTLLHASAQGGSTHVVSAMIRAGANPDKDIAQVNTGHTPLHCAIIGGHRAAAKVLMMAGANVNIVD 526
            Y +R  + Q +G  I+KLVS  ATPQQW EWLRVPLEHAA   N +LV+ LL++GADG AGW GC GRTL+ A+A GGS  VVSA++RAGA PD ++  V++  + L+ A + GH+ AA+ L+ AGA+VN  D
Sbjct:    4 YPERR-LFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLITAGADVNFED 135
[Close]
BLAST of mRNA_Ecto-sp13_S_contig17623.5326.1 vs. uniprot
Match: D7FPN3_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 2.830e-32
Identity = 208/390 (53.33%), Postives = 244/390 (62.56%), Query Frame = 2 
Query:  128 YEDRASILQDLGDMIFKLVSDRATPQQWAEWLRVPLEHAARTANHDLVDKLLKSGADGGAGWCGCSGRTLLHASAQGGSTHVVSAMIRAGANPDKDIAQVNTGHTPLHCAIIGGHRAAAKVLMMAGANVNIVDVKNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANFPCPKHSGALLHVAARYDRTGAIPLLVEAGADIEARCDKGQTPLFVASFFGSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRWEADETALDNKNKTASARIPDITQAAEDDRPELHRLSKLLAQAARDKAWRRRGIIVMCYAHLGRARV 1297
            YEDRA+IL+   D  F+LV DRATP+QWAEWLR PLEHAA TA+HDLV KLL +GA+G  GW GC G+TLLHA+A+GG+  V+ A++RAGA  DKD A      TP                    A+V+ +D   + XXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  A+F    ++  +LHVAA Y+  G                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       DET +DN+ +TA  R+P I    E+ RP + RLSK+LA+A +D+AW RRG +VMC A   + R+
Sbjct:    7 YEDRANILRGSEDTTFRLVCDRATPEQWAEWLRAPLEHAAATADHDLVKKLLNAGANGSTGWVGCDGKTLLHAAAEGGNAQVIMALLRAGAAGDKDTAASYKERTPXXXXXXXXXXXXXXXXXXXXADVHSLDTDQDXXXXXXXXXXXXXXXXXXXXXXXXPNDEVVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------ASFRLA-NATTVLHVAAEYNEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDETIVDNRGRTAYQRLPAIDNVVEEYRPGIERLSKVLARAPQDRAWCRRGFLVMCRARPDKVRL 377
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17623.5326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2A3_ECTSI1.880e-6748.39Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LHQ7_ECTSI1.490e-5162.84F-box domain and ankyrin repeat protein n=1 Tax=Ec... [more]
D7FM65_ECTSI1.250e-4150.26Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
D7FQP2_ECTSI2.640e-4061.36Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D7FQP1_ECTSI3.610e-3960.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G292_ECTSI3.820e-3953.44Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JXY4_9PHAE3.080e-3458.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU78_9PHAE7.290e-3329.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRZ8_ECTSI1.060e-3254.89Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FPN3_ECTSI2.830e-3253.33Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ecto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17623contigEcto-sp13_S_contig17623:2..2942 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score244.2
Seed ortholog evalue1.3e-61
Seed eggNOG ortholog2880.D7G2A3
Model size2438
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons2
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Cds size1482
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462916.182154-UTR-Ecto-sp13_S_contig17623:1..8281681462916.182154-UTR-Ecto-sp13_S_contig17623:1..828Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17623 2..828 -
1681462916.196119-UTR-Ecto-sp13_S_contig17623:1331..13421681462916.196119-UTR-Ecto-sp13_S_contig17623:1331..1342Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17623 1332..1342 -
1681462916.2256773-UTR-Ecto-sp13_S_contig17623:2824..29421681462916.2256773-UTR-Ecto-sp13_S_contig17623:2824..2942Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17623 2825..2942 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462916.2124088-CDS-Ecto-sp13_S_contig17623:1342..28241681462916.2124088-CDS-Ecto-sp13_S_contig17623:1342..2824Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17623 1343..2824 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17623.5326.1prot_Ecto-sp13_S_contig17623.5326.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17623 1343..2824 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17623.5326.1

>prot_Ecto-sp13_S_contig17623.5326.1 ID=prot_Ecto-sp13_S_contig17623.5326.1|Name=mRNA_Ecto-sp13_S_contig17623.5326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=494bp
MPGYEDRASILQDLGDMIFKLVSDRATPQQWAEWLRVPLEHAARTANHDL
VDKLLKSGADGGAGWCGCSGRTLLHASAQGGSTHVVSAMIRAGANPDKDI
AQVNTGHTPLHCAIIGGHRAAAKVLMMAGANVNIVDVKNNSPLHLAIKGG
HEGLAEKLLLSGANPNIRSSTGTYPIHLAAHRGQDEVVHDLMHRGADQNS
VNAEGRTPLRIAVYEDHVSTVKVLLVGGADANFPCPKHSGALLHVAARYD
RTGAIPLLVEAGADIEARCDKGQTPLFVASFFGSRAAMLALLQLGANVNT
KTNRGSTPLHGACMQGRAAIADLLLRWEADETALDNKNKTASARIPDITQ
AAEDDRPELHRLSKLLAQAARDKAWRRRGIIVMCYAHLGRARVAVDIPES
EANGRSSRRARRRNVKMEVVVGGSQDKGHRIGPSPEGMGRAQRRAGGVGD
PAGGFDDVMAWLMTLTVGKEVVSEHAATNHPHDGIFRKIVGFL*
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mRNA from alignment at Ecto-sp13_S_contig17623:2..2942-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17623.5326.1 ID=mRNA_Ecto-sp13_S_contig17623.5326.1|Name=mRNA_Ecto-sp13_S_contig17623.5326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2941bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17623:2..2942- (Ectocarpus species13 EcNAP12_S_4_19m)
CCACGCTACTCCGCGCTCCATAGATGCACACCACGGAGATGTGCAGCTGG
TTTGACATATCCCAAGATAGTCAGCTCGCCCTGAGGCTTTCCTTGAGCTC
AGAAGCGAGATAAACGGCATGCCGGGTTACGAAGACCGTGCGAGCATCCT
ACAGGATCTTGGAGACATGATATTCAAACTTGTGTCCGACAGGGCCACAC
CCCAGCAGTGGGCCGAGTGGCTGAGGGTTCCGCTAGAGCATGCGGCACGT
ACGGCTAACCACGACCTAGTAGACAAACTACTGAAATCCGGGGCAGATGG
CGGTGCTGGGTGGTGCGGCTGTAGCGGGCGCACATTGCTGCATGCAAGTG
CTCAAGGCGGCAGCACGCACGTTGTGTCGGCGATGATCAGGGCAGGTGCC
AACCCAGACAAGGACATCGCTCAAGTGAATACGGGTCATACCCCTCTCCA
TTGTGCCATTATTGGTGGACACAGAGCTGCCGCGAAGGTGCTCATGATGG
CCGGGGCGAACGTAAACATCGTTGATGTCAAGAACAACAGCCCGCTTCAC
CTCGCCATCAAAGGCGGTCATGAAGGACTTGCCGAGAAATTGTTACTGAG
CGGCGCCAATCCCAATATCCGAAGCTCCACAGGTACGTACCCGATTCATC
TTGCTGCCCACCGCGGCCAAGACGAGGTGGTGCACGATCTAATGCACAGG
GGTGCCGATCAGAATAGTGTTAACGCCGAAGGGCGGACTCCGTTGCGCAT
TGCGGTCTACGAGGACCACGTATCGACGGTGAAGGTTCTCTTGGTTGGTG
GTGCCGATGCGAACTTTCCTTGCCCAAAACATTCGGGCGCCCTGCTTCAC
GTGGCTGCAAGGTACGACCGGACGGGGGCTATTCCGTTGCTGGTTGAGGC
GGGAGCGGACATCGAAGCTCGGTGCGATAAAGGTCAGACACCGCTTTTCG
TGGCGTCGTTCTTCGGCTCGCGTGCTGCCATGCTCGCTCTCCTGCAGTTG
GGAGCAAACGTGAACACAAAAACGAACCGCGGATCTACTCCGTTACATGG
CGCCTGCATGCAAGGGAGGGCGGCCATTGCCGATCTACTGCTGAGATGGG
AAGCGGACGAGACCGCACTCGACAACAAGAATAAAACCGCAAGCGCCAGG
ATACCAGACATCACCCAAGCTGCCGAGGATGATCGTCCTGAGCTTCATCG
TCTATCGAAGCTCCTGGCACAGGCTGCAAGAGACAAGGCGTGGCGTCGCC
GCGGCATCATTGTAATGTGCTACGCCCACCTCGGGAGGGCCCGGGTCGCA
GTGGATATCCCCGAATCGGAAGCTAACGGACGGTCAAGCCGCCGAGCTAG
GAGGAGGAATGTCAAGATGGAGGTTGTGGTAGGTGGGTCACAAGATAAAG
GGCACCGCATCGGACCGAGCCCGGAAGGGATGGGGCGCGCGCAGAGAAGA
GCCGGAGGGGTTGGCGACCCCGCCGGCGGGTTTGATGATGTGATGGCGTG
GCTTATGACCTTGACAGTCGGCAAAGAAGTGGTGAGCGAGCACGCGGCCA
CAAACCATCCGCACGACGGCATATTTCGGAAGATCGTGGGGTTCCTGTAA
GCCTAATCAAGGTCAGTAATGTCAGTGCACGGATGGATGCACAACCATCG
CATGAAACGATGTCACGGCCAGGGAGGATACCGAAAGCGTCGCGTGATTT
CGACTAACGGCATGCATGCGCAGCAGAGGTGAAACTATTTTGTGCTCGAG
TATACATGACCCGTGGTCGTGGCTTCTGCGTTTGAAAAAGCGAGACTATG
CGGTATGCATTTGTATGCATTGGAAATAGATAGGTATATGGCGTGACGGT
ATGGTTTAGCCGGGACCATGGAAGCTCCTCTCCATTCGTTACTCAGGGAG
GGGGGGGGTTATGTCGCGTATCTTCGATCAATGGTCTCGTCATTCTGTGT
GGCGTTTAGACCTTCGTTTTGACGGCAAACAAGGTGGTAGACTATCCTTC
GCCAAGTGCATTCTTGCCGTTTTCTTGACGTGTGCTCTGGTACTCTCCGC
CACTTGACGTTGTTACTGGTGCGTGCCCGTTCACTCACACACCCCTTACG
CTGTTTATTGGCAGTTCCGGCCATCATCTCAAACGGTGTATCCATTCCAG
GCGCTGGTCCAAAGTCATCAAATCGGAGTACCACGGACGGCCACCAAGTC
CAGGCTCCGCAGAAAATAATATTGCTTTGACGACAGCCTTGTCCTAAAGA
ACATCTCAACGACATCAGGCGGCCTTCAGCGTTATCAGGCACACCATGAA
GGACGTTTTGCTCTATTATAGAGCTGCTTCTTCGCGCACAAGGTCGTGGG
GGTTCTACTCGAGCATGTGTCGGATGTTTTGTGCGTGTAAGCCAATGCTA
CAGAAACCCATGAACAAGTTTCGTACGCAATCGGAGTATGTAATGCATCT
TACCGTCGAGCATGGATCACAGGCGGGTTCGACAGCCCCGGCATAAACGA
AGTATACATGTTGTGTTTCCAGTGCTGACATGGTTTTTGGTCCTATGGAA
CAGTGCGACGAAGTGGAGTTCAAAGTGCTCTAGCGGCGGTACCGAACCCA
GGGTGCAAGGGAATCGTCGACAAGGCAACGGGGGTTTGGGGGTACGTAAG
AAATAGATGCACAAGCAATGCTAGGATGCATCGTCCAAATGGGGTAATTA
ATTGTCCTAGCTGGGTCAAGGCTGTGCAAACGTTCTGTGTTCATTCAATA
CATTTGTCGGCTGAGTGAGTTTCTAACGCAACCAGTCTGCGGTTGTAAGC
AAGCCTAACCTCCGTTTGATTTGATGTCAACGTATCCCAAGGCCTTGGCT
TTTTTCCCTCCGAGAGTTCAAGACAGACCGCCACATATAACGGCGACGAA
GAGATTCGGGTGTGCGCACACCTGTCTCCGCGGGGTGTGTA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17623:2..2942-

>mRNA_Ecto-sp13_S_contig17623.5326.1 ID=mRNA_Ecto-sp13_S_contig17623.5326.1|Name=mRNA_Ecto-sp13_S_contig17623.5326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1482bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17623:2..2942- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGGGTTACGAAGACCGTGCGAGCATCCTACAGGATCTTGGAGACAT
GATATTCAAACTTGTGTCCGACAGGGCCACACCCCAGCAGTGGGCCGAGT
GGCTGAGGGTTCCGCTAGAGCATGCGGCACGTACGGCTAACCACGACCTA
GTAGACAAACTACTGAAATCCGGGGCAGATGGCGGTGCTGGGTGGTGCGG
CTGTAGCGGGCGCACATTGCTGCATGCAAGTGCTCAAGGCGGCAGCACGC
ACGTTGTGTCGGCGATGATCAGGGCAGGTGCCAACCCAGACAAGGACATC
GCTCAAGTGAATACGGGTCATACCCCTCTCCATTGTGCCATTATTGGTGG
ACACAGAGCTGCCGCGAAGGTGCTCATGATGGCCGGGGCGAACGTAAACA
TCGTTGATGTCAAGAACAACAGCCCGCTTCACCTCGCCATCAAAGGCGGT
CATGAAGGACTTGCCGAGAAATTGTTACTGAGCGGCGCCAATCCCAATAT
CCGAAGCTCCACAGGTACGTACCCGATTCATCTTGCTGCCCACCGCGGCC
AAGACGAGGTGGTGCACGATCTAATGCACAGGGGTGCCGATCAGAATAGT
GTTAACGCCGAAGGGCGGACTCCGTTGCGCATTGCGGTCTACGAGGACCA
CGTATCGACGGTGAAGGTTCTCTTGGTTGGTGGTGCCGATGCGAACTTTC
CTTGCCCAAAACATTCGGGCGCCCTGCTTCACGTGGCTGCAAGGTACGAC
CGGACGGGGGCTATTCCGTTGCTGGTTGAGGCGGGAGCGGACATCGAAGC
TCGGTGCGATAAAGGTCAGACACCGCTTTTCGTGGCGTCGTTCTTCGGCT
CGCGTGCTGCCATGCTCGCTCTCCTGCAGTTGGGAGCAAACGTGAACACA
AAAACGAACCGCGGATCTACTCCGTTACATGGCGCCTGCATGCAAGGGAG
GGCGGCCATTGCCGATCTACTGCTGAGATGGGAAGCGGACGAGACCGCAC
TCGACAACAAGAATAAAACCGCAAGCGCCAGGATACCAGACATCACCCAA
GCTGCCGAGGATGATCGTCCTGAGCTTCATCGTCTATCGAAGCTCCTGGC
ACAGGCTGCAAGAGACAAGGCGTGGCGTCGCCGCGGCATCATTGTAATGT
GCTACGCCCACCTCGGGAGGGCCCGGGTCGCAGTGGATATCCCCGAATCG
GAAGCTAACGGACGGTCAAGCCGCCGAGCTAGGAGGAGGAATGTCAAGAT
GGAGGTTGTGGTAGGTGGGTCACAAGATAAAGGGCACCGCATCGGACCGA
GCCCGGAAGGGATGGGGCGCGCGCAGAGAAGAGCCGGAGGGGTTGGCGAC
CCCGCCGGCGGGTTTGATGATGTGATGGCGTGGCTTATGACCTTGACAGT
CGGCAAAGAAGTGGTGAGCGAGCACGCGGCCACAAACCATCCGCACGACG
GCATATTTCGGAAGATCGTGGGGTTCCTGTAA
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