prot_Ecto-sp13_S_contig1762.5324.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1762.5324.1
Unique Nameprot_Ecto-sp13_S_contig1762.5324.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length498
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1762.5324.1 vs. uniprot
Match: A0A6H5JQ54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ54_9PHAE)

HSP 1 Score: 406 bits (1044), Expect = 2.390e-134
Identity = 453/475 (95.37%), Postives = 456/475 (96.00%), Query Frame = 0 
Query:   23 GLRAAAASGWLPFADLITLQLASLAMCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHERIDSADEGDGSRGAPAFASRVPRPTIEAISWIRASPCSALRDKLPSEAKRLTFGSNFNHTVVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPVQDSTNKVKEGGVRLPSTLERIALGSYRRSLTGVSWPPGLLALVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSHFSIDSKVFNHPVSGVSWPDFMTDLHFGDGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDLGHCHMTWGCGPKEGYETWSPRLEIISRKRISTLGWQRKEGCR 497
            GLRAAAASGWLPFADLITLQLASLAMCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHE  DSADEGDGS GAP FASRVPRPTIEAISWIRASPCSALRDKLPSEAKRLTFGSNFNHT+VGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   V  ST+KVKEGGVR PSTLERIALGSYRRSLTGVSWPPG      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLS FSIDSKVFN+PVSGVSWPDFMTDLHFGDGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDLGHCHMTWGCGPKEGYE WSPRLEIISRKRISTLGWQRKE CR
Sbjct:   16 GLRAAAASGWLPFADLITLQLASLAMCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHESTDSADEGDGSGGAPGFASRVPRPTIEAISWIRASPCSALRDKLPSEAKRLTFGSNFNHTLVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVH-STDKVKEGGVRWPSTLERIALGSYRRSLTGVSWPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQFSIDSKVFNYPVSGVSWPDFMTDLHFGDGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDLGHCHMTWGCGPKEGYENWSPRLEIISRKRISTLGWQRKEECR 489
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BLAST of mRNA_Ecto-sp13_S_contig1762.5324.1 vs. uniprot
Match: D7FU94_ECTSI (Proline dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU94_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 1.530e-109
Identity = 244/256 (95.31%), Postives = 246/256 (96.09%), Query Frame = 0 
Query:    1 AESRPSAATTDDADRCRCRRDAGLRAAAASGWLPFADLITLQLASLAMCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHERIDSADEGDGSRGAPAFASRVPRPTIEAISWIRASPCSALRDKLPSEAKRLTFGSNFNHTVVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPVQDSTNKVKEGGVRLPSTLERIALGSYRRSLTGVSWPPGLLALVL 256
            AESRPSAATTDDADR RCRRDAGLRAAAASGWLPFADLIT QLASLAMCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHE  DSADEG+GS GAP FASRVPRPTIEAISWIRASPC ALRDKLPSEAKRL FGSNFNHTVVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPVQDST+KVKEGGVR PSTLERI LGSYRRSLTGVSWPPGLLALVL
Sbjct:    3 AESRPSAATTDDADRRRCRRDAGLRAAAASGWLPFADLITFQLASLAMCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHESTDSADEGEGSGGAPGFASRVPRPTIEAISWIRASPCPALRDKLPSEAKRLAFGSNFNHTVVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPVQDSTDKVKEGGVRWPSTLERITLGSYRRSLTGVSWPPGLLALVL 258
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1762.5324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQ54_9PHAE2.390e-13495.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU94_ECTSI1.530e-10995.31Proline dehydrogenase n=1 Tax=Ectocarpus siliculos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 349..390
e-value: 2.8E-4
score: 21.0
coord: 282..323
e-value: 7.7E-7
score: 29.2
coord: 393..434
e-value: 2.2E-4
score: 21.3
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 303..454
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 123..215
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 123..215
coord: 225..340
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 225..340
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 303..454
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 135..461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1762contigEcto-sp13_S_contig1762:3464..4957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1762.5324.1mRNA_Ecto-sp13_S_contig1762.5324.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1762 3464..4957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1762.5324.1 ID=prot_Ecto-sp13_S_contig1762.5324.1|Name=mRNA_Ecto-sp13_S_contig1762.5324.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=498bp
AESRPSAATTDDADRCRCRRDAGLRAAAASGWLPFADLITLQLASLAMCV
ICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHERIDSADEGDGSRGAPAFA
SRVPRPTIEAISWIRASPCSALRDKLPSEAKRLTFGSNFNHTVVGIRWPE
GLEEIRFGSKFSQPVAGVAWPASLKRLSFGQAFDKSLADATFPEGLKEIS
FGSKFNQSLLPVQDSTNKVKEGGVRLPSTLERIALGSYRRSLTGVSWPPG
LLALVLTGEFDLPLAGITLPDSLEELEISSTFNHPIDEVDFPRGLKTLTF
GNQFNQAIDKVKFPAGLERLRLGLSFDQPVARVHFPARLSHFSIDSKVFN
HPVSGVSWPDFMTDLHFGDGFNQEINSAALPPRLVRLALGDRFNKPVLGV
AWPPGLRDLSFGHNFNQPVVDVVWPSSLRRLRFGARFKQCLSGVDWPTGL
ETLDLGHCHMTWGCGPKEGYETWSPRLEIISRKRISTLGWQRKEGCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP