mRNA_Ecto-sp13_S_contig17601.5317.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17601.5317.1 vs. uniprot
Match: D8LS47_ECTSI (Predicted methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS47_ECTSI) HSP 1 Score: 440 bits (1132), Expect = 1.250e-153 Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 1
Query: 1 KVSDISETTSRPAMLCAPLRSAGAPTMVLGGFSMHRISGGDQKSTMEPGLDTEHKVSASSARRTNGRFLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVARR 657
KVSDISE+TSRPAMLCAPLRSAGAPTMVLGGF+MHRISGGDQKSTMEPGLDTEHKVSAS ARRTNGR LDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVARR
Sbjct: 174 KVSDISESTSRPAMLCAPLRSAGAPTMVLGGFAMHRISGGDQKSTMEPGLDTEHKVSASGARRTNGRVLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVARR 392
BLAST of mRNA_Ecto-sp13_S_contig17601.5317.1 vs. uniprot
Match: A0A7S4DCZ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCZ9_HETAK) HSP 1 Score: 290 bits (742), Expect = 2.800e-94 Identity = 137/220 (62.27%), Postives = 169/220 (76.82%), Query Frame = 1
Query: 1 KVSDISETTSRPAMLCAPLRSAGAPTMVLGGFSMHRISGGDQKST-MEPGLDTEHKVSASSARRTNGRFLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVARR 657
K+S +S+TT PAMLCAPL +GAPTMVLGGF+MHRI+G D+K T M P DT++K+ A+ ++ G LDTC GLGYTAIAAA C ++ V T+ELD+VS+ MCR NPWSQ++F+NEKI + GD CE++K F F+ IIHDPPARALCK +DMYG AFY DL RVL+PG TLFHYIGNP S E GRLF+GVIDRL +GF TDK+AFGV A++
Sbjct: 184 KISAMSKTTGNPAMLCAPLTGSGAPTMVLGGFTMHRITGDDRKKTSMGPQEDTKNKIKAAGFKKVYGSVLDTCLGLGYTAIAAAECANINKVTTIELDDVSIEMCRNNPWSQDIFQNEKINLIHGDACEVIKSFPANHFSGIIHDPPARALCKASDMYGQAFYDDLWRVLRPGATLFHYIGNPASKESGRLFKGVIDRLYKSGFQQVSTDKQAFGVTAKK 403
BLAST of mRNA_Ecto-sp13_S_contig17601.5317.1 vs. uniprot
Match: A0A7R9U1D7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1D7_9STRA) HSP 1 Score: 263 bits (673), Expect = 1.600e-84 Identity = 132/222 (59.46%), Postives = 160/222 (72.07%), Query Frame = 1
Query: 1 KVSDISETTSRPAMLCAPLRSAGAPTMVLGGFSMHRISGGDQKSTMEPGLDTEHKVSASSARRTNGRFLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEK---ITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVARR 657
KVS +S T RPA L PL + GAPTM+LGGFSMHRISGGDQKS+M+P DT +K++A A R G LDTC GLGYTAI AAR GV+ VVT+ELD+ S+ MC NPWS +F +E+ + GD CE+V D +F+AIIHDPPA ALCK TD+Y +FY+ L RVLK GG +FHYIGNP+S E GRL+RG+ RL AGF KTDK AFG+VA+R
Sbjct: 131 KVSCLSPNTQRPASLMPPLYAGGAPTMLLGGFSMHRISGGDQKSSMDPMEDTRNKIAALGADRLYGEVLDTCCGLGYTAIEAARSSGVTKVVTIELDDASIEMCEANPWSWPLFGDEENLDVDLRRGDACEIVTSLADEQFSAIIHDPPALALCKDTDLYSLSFYEQLRRVLKRGGKIFHYIGNPDSKESGRLYRGISSRLQDAGFGSVKTDKTAFGLVAKR 352
BLAST of mRNA_Ecto-sp13_S_contig17601.5317.1 vs. uniprot
Match: A0A0G4FLZ1_VITBC (Methyltransf_25 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FLZ1_VITBC) HSP 1 Score: 199 bits (505), Expect = 4.840e-58 Identity = 94/175 (53.71%), Postives = 122/175 (69.71%), Query Frame = 1
Query: 133 TMEPGLDTEHKVSASSARRTNGRFLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVARR 657
+MEP DT K+ + GR LD CTGLGYTAIAA+R G V+T+ELDEVSL MCRRNPWS+E+ ++KIT L GD EL+ + D F+ +IHDPPARALCK D++G FY +L RVL+ GG LFHY+GNP+ EG L++GV++RL GF + +AFG+VAR+
Sbjct: 287 SMEPWKDTMRKLESLGPGGVMGRVLDICTGLGYTAIAASREEGAPAVLTIELDEVSLDMCRRNPWSRELLTSDKITMLRGDASELITELPDESFSVVIHDPPARALCKEGDLFGEVFYSELYRVLRRGGRLFHYLGNPDGREGPSLYKGVMERLSQQGFWSIRKVPRAFGLVARK 461
BLAST of mRNA_Ecto-sp13_S_contig17601.5317.1 vs. uniprot
Match: A0A7S0JHK9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JHK9_9EUKA) HSP 1 Score: 184 bits (466), Expect = 7.370e-54 Identity = 101/217 (46.54%), Postives = 131/217 (60.37%), Query Frame = 1
Query: 1 KVSDISETTSRPAMLCAPLRSAGAPTMVLGGFSMHRISGGDQKSTMEPGLDTEHKVSASSARRTNGRFLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVA 651
KV SE T R A L PL PT VL GF+MHR+ ++PG DT K+ A ++ NGR LD CTGLGYTAI AA V VVT+ELD + + + R NPWS E+F + KI LLGD EL+ DG F A IHDPP AL +++ Y+ L R L+PGG LFHY+G+P S GR+F+G+++RL AGF + + KA+G+ A
Sbjct: 77 KVEGFSERTRRTASLL-PLPGGVPPTAVLSGFNMHRMR------DVDPGEDTRRKLGAIGSKL-NGRVLDVCTGLGYTAIGAAARPTVDEVVTIELDPLMIELQRANPWSAELFESPKIVRLLGDATELLPALPDGHFHACIHDPPTAALAG--ELFSVEIYRQLRRCLRPGGVLFHYVGDPASKASGRMFKGIVERLRVAGF-EARVHAKAYGIAA 282
BLAST of mRNA_Ecto-sp13_S_contig17601.5317.1 vs. uniprot
Match: A0A1F8QGB8_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium RBG_16_54_18 TaxID=1797648 RepID=A0A1F8QGB8_9CHLR) HSP 1 Score: 182 bits (462), Expect = 1.040e-53 Identity = 103/217 (47.47%), Postives = 135/217 (62.21%), Query Frame = 1
Query: 1 KVSDISETTSRPAMLCAPLRSAGAPTMVLGGFSMHRISGGDQKSTMEPGLDTEHKVSASSARRTNGRFLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVA 651
KV+ SE + R L + + GAP+M++ G MHRI G P LDT K+ A A + +G LDTCTGLGYTAIAAAR S V+T+ELD L++ R NPWS ++F N +I LGD E++K + F ++HDPP AL D+YG FY+ L R+L+PGG LFHYIG+P+S G R+ RGVI RL AGFH+ + +AFGV A
Sbjct: 70 KVTIFSEVSER---LYSLYPTPGAPSMLVSGIPMHRIKG------TTPELDTHEKLKA--AGKPHGAALDTCTGLGYTAIAAART--ASRVMTIELDPAVLQLARLNPWSGQLFDNPRIEQRLGDSSEVLKQLGEEVFTWVLHDPPMLALAG--DLYGIEFYRQLFRILRPGGRLFHYIGDPDSTSGARVTRGVIQRLEQAGFHNIQRRPRAFGVTA 271
BLAST of mRNA_Ecto-sp13_S_contig17601.5317.1 vs. uniprot
Match: A0A7S0DVL0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DVL0_9EUKA) HSP 1 Score: 180 bits (457), Expect = 5.660e-52 Identity = 92/212 (43.40%), Postives = 129/212 (60.85%), Query Frame = 1
Query: 7 SDISETTSRPAMLCAPLRSAGAPTMVLGGFSMHRISGGDQKSTMEPGLDTEHKVSASSARRTNGRFLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFG 642
S +S R + P R+ PT+V+GGF+MHRI D P DT +K++ S G+ LD CTGLGYTAI A+ V V+T+ELD L +CR NPWS +F N KI++ +G+ +++++ + F+ I HDPPA+AL ++Y FY +L R+LK GG+LFHY+GNP S E G LF G++ RL AGF + + KAFG
Sbjct: 154 SSLSSNFRRERRILTPPRTP--PTLVIGGFTMHRIKNAD------PMSDTYNKIATFSKTSLKGKALDICTGLGYTAIEMAKKPYVESVLTLELDPSVLEICRCNPWSANLFENPKISTRIGNAADIIQELESESFSLICHDPPAQALTFAGELYSLDFYSNLYRILKKGGSLFHYVGNPASKESGTLFAGIMRRLQDAGFRNVRKSPKAFG 357
BLAST of mRNA_Ecto-sp13_S_contig17601.5317.1 vs. uniprot
Match: A0A7S0G4I5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G4I5_9RHOD) HSP 1 Score: 179 bits (455), Expect = 6.580e-52 Identity = 96/218 (44.04%), Postives = 131/218 (60.09%), Query Frame = 1
Query: 1 KVSDISETTSRPAMLCAPLRSAGAPTMVLGGFSMHRISGGDQKSTMEPGLDTEHKVSASSARRTNGRFLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVAR 654
++++ S+ T R A+ P+ APT+V+GGF MHRI D P DT+ K+ A +G LD CTGLGYTAIA A V V T+ELD + + RNPWS+ +F+N KI +GD +++ D F+ I+HDPPA ALC ++Y FY+ L R LKP G L+HY+G+P S E GRL+ G++DRL AGF K AFG++AR
Sbjct: 130 RIAEFSDKTQR-AISLLPIAKGVAPTVVIGGFGMHRIKSSD------PWTDTQLKMKALGTA--SGNALDICTGLGYTAIALADQSTVDRVTTIELDPSIVNIQLRNPWSRRLFQNPKIHREVGDAVKVLPTLPDRSFSTIVHDPPALALCN--ELYTLEFYQQLRRTLKPSGKLYHYVGDPASKESGRLYNGIMDRLQQAGFQQVKKADGAFGIIAR 336
BLAST of mRNA_Ecto-sp13_S_contig17601.5317.1 vs. uniprot
Match: A0A2V3IYU6_9FLOR (MTS domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYU6_9FLOR) HSP 1 Score: 178 bits (451), Expect = 2.290e-51 Identity = 98/217 (45.16%), Postives = 130/217 (59.91%), Query Frame = 1
Query: 1 KVSDISETTSRPAMLCAPLRSAGAPTMVLGGFSMHRISGGDQKSTMEPGLDTEHKVSASSARRTNGRFLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVA 651
K++++S T+RPA L P+ PT+VL GFSMHR + +P DT K++A S R GR LD CTGLGYTAIAAAR V+ + T+ELD + + + RRNPWS E+F KI + D + + D F IIHDPPAR L D+Y FY+ L RV LFHYIG+P S E GRL++G+ DRL+ AGF + +A+G+ A
Sbjct: 123 KIAELSLLTNRPASLL-PVGPNVPPTLVLAGFSMHRFK------SFDPAADTAEKLAALSPLR--GRVLDICTGLGYTAIAAARSPAVTSLTTIELDPMVISIARRNPWSAELFSLRKIKIVEDDATQALPRLQDKSFDVIIHDPPARVLAG--DLYSLLFYRQLRRVCASRALLFHYIGDPNSRESGRLYKGITDRLLQAGFGRIQLQPRAYGLTA 328
BLAST of mRNA_Ecto-sp13_S_contig17601.5317.1 vs. uniprot
Match: A0A8J6CC42_DIALT (Methyltransf_25 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CC42_DIALT) HSP 1 Score: 177 bits (448), Expect = 4.230e-51 Identity = 98/217 (45.16%), Postives = 126/217 (58.06%), Query Frame = 1
Query: 1 KVSDISETTSRPAMLCAPLRSAGAPTMVLGGFSMHRISGGDQKSTMEPGLDTEHKVSASSARRTNGRFLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVA 651
++ SE T R A L P+ G PT VL GF+MHR+ G P DT K+ A +G LD CTGLGYTAIAAA+ V V T+ELD + M RRNPWS+E+F + K+ LLGD L+ F+ +IHDPP ++ D+Y FY+ L RVL+P G LFHYIG+P+S G++F+G RL AGF K +AFGVVA
Sbjct: 106 RIETFSEATKRHAKLL-PVEH-GCPTAVLAGFNMHRMKG------TNPVADTREKLRAFGEHGPSGAVLDVCTGLGYTAIAAAKLASVERVTTIELDPGMVEMQRRNPWSRELFSSAKVERLLGDATALLPQLGSTAFSYVIHDPPVNSIAG--DLYSLQFYQQLHRVLRPSGRLFHYIGDPDSKVSGQMFKGCAARLREAGFGSVKLAARAFGVVA 312 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17601.5317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17601.5317.1 >prot_Ecto-sp13_S_contig17601.5317.1 ID=prot_Ecto-sp13_S_contig17601.5317.1|Name=mRNA_Ecto-sp13_S_contig17601.5317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp KVSDISETTSRPAMLCAPLRSAGAPTMVLGGFSMHRISGGDQKSTMEPGLback to top mRNA from alignment at Ecto-sp13_S_contig17601:635..3621+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17601.5317.1 ID=mRNA_Ecto-sp13_S_contig17601.5317.1|Name=mRNA_Ecto-sp13_S_contig17601.5317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2987bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17601:635..3621+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17601:635..3621+ >mRNA_Ecto-sp13_S_contig17601.5317.1 ID=mRNA_Ecto-sp13_S_contig17601.5317.1|Name=mRNA_Ecto-sp13_S_contig17601.5317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17601:635..3621+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |