mRNA_Ecto-sp13_S_contig176.5314.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig176.5314.1
Unique NamemRNA_Ecto-sp13_S_contig176.5314.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 967 bits (2501), Expect = 0.000e+0
Identity = 536/641 (83.62%), Postives = 546/641 (85.18%), Query Frame = 1
Query:    1 GTGCGGRGEGCCTSDAALSLCSVTGKSPCLMDSAIPATTTDVIDN--------------------------TDTTXXXXXGTKSVASTATSCGGVASGYYCCNAGCGTCGGXXXXXXXXXXXXXXXXLSXXXXXXXSPCLMEXXXXXXXXXXXXXXXXXXXXXXXXXCTDYSKSTVTIEIKNNVETSSKKN-GGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLPDLC 1842
            GTGCG RG+GCCTSDAALSLCSVTG SPCLMD                                       T TT     GT    +TATSC GV+ G YCCNAGCGTCGGXXXXXXXXXXXXXXXX  XXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXX                         GGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEE SLLQVHGPDAGGDARVLRIQSTGS DYYEIRGHGGSLSFMDTKVTSWDTDEK+VNTNY+KERSFIRCVSEELAD PDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPE+FERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVW NTVYDM+DAGMAIMESMGAHI+DNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGND+PEASK WDGLLVDNTFHANTVEGGVKIQKAEGI FTDN FYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKN DYMK+YDSLPDLC
Sbjct:  205 GTGCGMRGDGCCTSDAALSLCSVTGMSPCLMDCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTTTTTDTTSGTSVADATATSCDGVSKGAYCCNAGCGTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNIDYMKSYDSLPDLC 845          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 964 bits (2493), Expect = 0.000e+0
Identity = 520/652 (79.75%), Postives = 529/652 (81.13%), Query Frame = 1
Query:   22 GEGCCTSDAALSLCSVTGKSPCLMDSAIPATTTDVIDNTDTTXXXXXGTKSVASTATSCGGVASGYYCCNAGCGTCGGXXXXXXXXXXXXXXXXLSXXXXXXXSPCLMEXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------CTDYSKSTVTIEIKNNVETSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLPDLC 1842
            GEGCCTSDAALSLCSVTGKSPCLMDSAIPATTTD+IDNTDTTXXXXX    VASTATSCGGVASGYYCCNAGCGTCGG XXXXXX         LS       SPCLME    XXXXXXXXXXXXXXXXXXX                                               CTDYSKSTVTIEIKNNV+TSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQST S+DYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNY KERSF+RCVSEELADNPDTCDGHAVNHMGECRM                                         VRGDIIDS+IYGMYYGHYSFGHDGGIWTGN+MHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGA+RN+VENN F ECDQYGIYTYQGNDEPEASK WDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNN VPD ICLKGD NTDY K+YDSLPD C
Sbjct:  296 GEGCCTSDAALSLCSVTGKSPCLMDSAIPATTTDIIDNTDTTXXXXXXXXXVASTATSCGGVASGYYCCNAGCGTCGGTXXXXXXDGCCASDAALSLCSATGMSPCLMETSSTXXXXXXXXXXXXXXXXXXXGSVAXXXTSCGGVAKGAYCCNAGASTTTTTTVDGXXXXXXXXXXXXTCTDYSKSTVTIEIKNNVQTSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTASNDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYNKERSFVRCVSEELADNPDTCDGHAVNHMGECRM-----------------------------------------VRGDIIDSNIYGMYYGHYSFGHDGGIWTGNQMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNLVPDGICLKGDDNTDYFKSYDSLPDTC 906          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 472 bits (1215), Expect = 4.870e-152
Identity = 249/447 (55.70%), Postives = 303/447 (67.79%), Query Frame = 1
Query:  508 YIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDP------NPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEG-----GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMK 1815
            Y  GGGC TLT +Y AQ G   DGPL+VLD N++VVGG+PTGYWLL R++ V + S L VHG  A GDA VLR+ ST S D+ E+RG+GG+L F  T VTSWDTD  +        RSFI CV++        CDG +    GECRMDII S MG MG+  AESYG++WKVRG C  DP      N E+FE   V GDI++S+IYGMYYGHYS+GH GG+W  N M DN QYGFDPHDDSD+L I+ N V+GNGNHGIIASKRCNNVKI +N VYDGGE AVGIFLHRSSD  EV +N VY+M+DAGMA+MES  A+IYDN+FTN +YGIRLS+G+ RNI+ NN F    QYG+YTY G+D+P+     +G   DN F  NT+E      GV I++ +   F DN F   S+   Y FED  D  W +N      CL G  +TD+ +
Sbjct:  192 YFEGGGCGTLTQMYEAQEG---DGPLYVLDENNDVVGGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNS-NGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVST---YEFEDSSDTTWVDNTGGG--CLDG--STDFAE 626          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 6.520e-143
Identity = 233/450 (51.78%), Postives = 297/450 (66.00%), Query Frame = 1
Query:  517 GGGCATLTDIYTAQGGHNDD---GPLFVLDSNDNV--VGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTV---EGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLPDLC 1842
            GGGC TL+D+Y  QG +N+    GP+FVLDSND V     + TG WLL  D+ V   + L   G   GG+   LRI+ST  SD++EIRGHGG+L F DT VTSWD D ++    Y+  RSFIRCVSE L    DTC   A+N+MGECRMDII SEMG +GYDA+E+YGI+WKVRG+CS+  NP++F+   V GD+  SDI+ MYYG YSFGH GG+WT N MHDN QYGFDPHDDSD L IA N V+ N NHGIIASKRCNNVKI+ N VYDGG  A GIFLHRS DD EV+ NT+ +M DAG+A++E+ G  I+DN     ++GIR+ +G++ N V +N F      G++TY G+DEP    G      DN F+ NT+   E GVKI++++ I+ T+N F   S   E  F +  D+VW+ N +P + CL+   N         LP  C
Sbjct:    8 GGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLT-GEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGGG---RPCDNEFYNNTIQATETGVKIKESDNISITNNAF---SGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSSGLPLEC 447          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 449 bits (1154), Expect = 7.520e-140
Identity = 230/455 (50.55%), Postives = 299/455 (65.71%), Query Frame = 1
Query:  499 GKNYIRGGGCATLTDIYTAQGGHNDD---GPLFVLDSNDNV--VGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHS--SGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLP 1833
            G+ Y  G GC T+TD+Y  +G  ND    GP+++LD +     +    T  WLL  ++++    +    G  AGGD   LRIQSTGS D++E+RGHGGSL F DT VTSWDT  KE    YE  RSF+ CVSE+L    D C+G+A N MGECRMDII SE+  +GY  +ESYG++WKVRG+C +  NPE+FE T V GD+  SDI+ +YYGHYS+GH GG+WT NKMHDN QYGFDPHDDSD L IAYN V+ N NHGIIASKRCNNVKI  N V DGG  A GIFLHRSSD   V++NT+ +M+DAG+A++ES  A IY N     KYGIR+S+G+  N V  NSF +  QYG+YTY+G+DEP+ S   DG    N    N VE    GVKI++ +     DN+FY+++  + + + F +  + +W+ N + D  C++ D   D     DS+P
Sbjct:  440 GRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTG--DDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS---DGRPSGNVLALNLVEDCPIGVKIKEGD-----DNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG-CIEEDDEFDAASGSDSIP 883          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 426 bits (1096), Expect = 8.450e-132
Identity = 292/620 (47.10%), Postives = 366/620 (59.03%), Query Frame = 1
Query:    1 GTGCGGRGEG-----CCTSDAALSLCSVTGKSPCLMDSAIPATTTDVIDNTDTTXXXXXGTKSVASTATSCGGVASGYYCCNAGCGTCGGXXXXXXXXXXXXXXXXLSXXXXXXX----SPCLMEXXXXXXXXXXXXXXXXXXXXXXXXXCTDYSKSTVTIEIKNNVETSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGG-----SPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDY 1809
            G+GC  RG G     CCTSD + +LCSVTG +PC++D              DT+  XXX     + + T C GV  G YCC+AGCG CGGXXXXXXXX         S           +PC+++          XXXXXXXXXXXXXXX      S         + TSS  +       GGGCATLTD+Y  Q G    GPL+VLDS++N+V G     SPTGYWLL   + + +   L VHG  AGGDA VLRIQST   D++EIRG GGSLSF++T VTSWDTD+ E  T YE  RSFI CV++    +  +C G +    GECRMDII S MG MG+  AESYG++WKVRG CS+  N E+ +   V GDI  S+IYGMYYG YS+GH GG+WT N M DN  YGFDPHDDSD+L IA NTV+GNGNHGIIASKRCNNV+I+                                      A+MES  A IYDNT  N KYGIRLS+G+A N + +N+F     YG+YTY+G+D+P+ S G DG + DN+F ANT+      +KI++ +  +FT+N F    + + + FED  D VWTNN +    CL  D++TD+
Sbjct:  259 GSGCSDRGGGLTGADCCTSDIS-NLCSVTGAAPCIVDG-------------DTSPTXXXXXXXXSGSFT-CDGVLKGDYCCSAGCGECGGXXXXXXXXGLTGADCCTSDISNLCSVTGAAPCIVDGDSTGPTPTPXXXXXXXXXXXXXXXXXGTIAS---------ISTSSDSSS----FSGGGCATLTDMYNTQSGS---GPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVS-GNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVF---ENVKTFEFEDSTDTVWTNNDIGGG-CL--DESTDF 837          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 412 bits (1059), Expect = 3.220e-131
Identity = 215/445 (48.31%), Postives = 284/445 (63.82%), Query Frame = 1
Query:  523 GCATLTDIYTAQGGHNDD---GPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVR---------GYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVE---GGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTD 1806
            GC TLTD+Y  +G  ND    GPL++LD + + +    S T  WLL  +++V   ++    G + GGD   LRIQSTG  D+YE+RGHGGS+ F  T VTSWDT  K+    YE  RSF+ CVSE+L    +TCDG A N MGECRMDII SEMG MG+  +ESYG++WKVR         G+C +  NP++FE T V GDI +SDI+ MYYGHYS+GH GG+WT N+MHDN QY            +A N V+ N NHGIIASKRCNNVKI+ N V DGG  AVGIFLHRSSD+ EV+ N +++M DAG+A++ES  A I+DN    V++GIR+S+G+  N V +N F +C  +G+YTY G+DEP+ S G       NTF+ N V    GGVK + ++ I  T+N+F   +  EE  F D +   W+ N +P  +C+    + D
Sbjct:   21 GCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTG--ETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSNG---RPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEF---TGTEELEFYDAQATTWSGNSLPSGVCIDNITSDD 445          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 4.720e-124
Identity = 209/437 (47.83%), Postives = 273/437 (62.47%), Query Frame = 1
Query:  517 GGGCATLTDIYT--AQGGHNDDGPLFVLDSNDNVVGGSP--TGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHAN---TVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTD 1806
            G GC T+TD+Y    +   +  GP+F LD + N V      +  WLL  ++H+   ++    G   GGD   LRIQSTG +D++E+R HGGS+ F  T VTSWDT  K     Y   RSF+ CVSE+L    + C G A N MGECRMDII SE+G +GY  +ESYG++WKVRG+C +  NP++F+ T V G++I SDI+  YYG YS+GH GG+W  N+MHDN QYGFDPHDDSD L              IIASKRCNNV+I++N VYDGG  A GIFLHRSSD   V +N V+DM+DAGMA++ESM A IY+N F++VK+GIRLS+G++ N V  N F +    G+YTYQG+DEP      DG   DN F  N    V  GVKI++ +    TDN F   +   E  F D ++  W  N +P  +C+K   + D
Sbjct:   84 GEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTG--EVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVS-DGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVF---TGTSELEFFDAQNTRWKGNTLPQGVCIKNIHSDD 502          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 378 bits (971), Expect = 4.150e-118
Identity = 207/464 (44.61%), Postives = 276/464 (59.48%), Query Frame = 1
Query:  442 STVTIEIKNNVETSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGGVK---IQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYD 1824
            S++ + ++ N E++       N    GGC TL  I+  Q    D  PL+ +D     V  S TG WLL  +++VE+   LQVHG  AGGDA  LR+ ST S  +  +R +GGSL F+ TKV +WDT +   + +    RS+I  VSE + D+  TC+G A N+MGE RMDI  SEM  +GY   E+YG++WKVRG+C +  NPELF+   V G+I DSDI+   +G Y++GH  G W  NKMHDN+ YGFDPHDDSD L I  N VW NG HGIIASKRCN V I  N VY G  G+ GIFLHRSSD+  V  N V+D  DAG+A++ES  A + DNTF N KYG+RLSVG  RNI   N      ++  ++Y G D+PE      G   DN F  N + GGV+   +++A+G  F DN F + ++    RF D    + + N    D  LK D+   + ++ D
Sbjct:   12 SSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQ---VDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLST-SDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDS--GRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAA---IRFVDATKTLMSGNTGLADSTLKVDRGATFDESSD 466          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 2.790e-117
Identity = 202/444 (45.50%), Postives = 271/444 (61.04%), Query Frame = 1
Query:  520 GGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGG---VKIQKAEGIAFTDNKF-YEHSSGEEYRFEDCEDVVWTNN----------RVPDDICLKGDKNTDY 1809
            GGCATL  I+ ++ G     PL+ +D +   V  + TG WLL  +++VE+   L+V+G D GGDA  LR+ ST S  Y  +R HGGSL F+ TKV SWDT     + +    RS+I  VSE + D  +TC+G+A N MGE RMDI  SE+G +G+  +ESYG++WKVRG+C +  NPE+F+   V G++ DSDI+ + +G Y++GH  G W  NKMHDN+ YGFDPHDDSD L I  N V+ NG HGIIASKRCN V I  N VY G E + GIFLHRSSDD  V  N V+D  DAG+A++ES  A + +NTF N KYG+R+SVG A N+   N      +Y  YTY G+DEP+      G   +N F  N+  G    +KI++A+G  F DN F    + G   RF+D  + V   N          +V +D C  G+ ++ Y
Sbjct:   71 GGCATLGQIWESRAGK---APLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLST-SETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSS--GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGY 508          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNF5_9PHAE0.000e+083.62MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LDB5_ECTSI0.000e+079.75Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G8D9_ECTSI4.870e-15255.70Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FRR8_ECTSI6.520e-14351.78Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LC73_ECTSI7.520e-14050.55Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FWE8_ECTSI8.450e-13247.10Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JGU8_9PHAE3.220e-13148.31MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LRM4_ECTSI4.720e-12447.83Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
Q7XAJ8_9PHAE4.150e-11844.61Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE4_ECTSI2.790e-11745.50Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig176contigEcto-sp13_S_contig176:25406..34404 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score477.6
Seed ortholog evalue8.1e-132
Seed eggNOG ortholog2880.D7G8D9
Model size2846
KEGG rclassRC00467
KEGG koko:K15920
KEGG ReactionR01433
KEGG Pathwayko00520,ko01100,map00520,map01100
Hectar predicted targeting categoryother localisation
Exons14
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.2.1.37
Cds size1755
COG Functional cat.U
CAZyGH3
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig176.5314.1prot_Ecto-sp13_S_contig176.5314.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig176 26407..34314 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462915.203563-UTR-Ecto-sp13_S_contig176:25405..264061681462915.203563-UTR-Ecto-sp13_S_contig176:25405..26406Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig176 25406..26406 -
1681462915.3576105-UTR-Ecto-sp13_S_contig176:34314..344041681462915.3576105-UTR-Ecto-sp13_S_contig176:34314..34404Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig176 34315..34404 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462915.213983-CDS-Ecto-sp13_S_contig176:26406..265671681462915.213983-CDS-Ecto-sp13_S_contig176:26406..26567Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 26407..26567 -
1681462915.2225935-CDS-Ecto-sp13_S_contig176:27364..275051681462915.2225935-CDS-Ecto-sp13_S_contig176:27364..27505Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 27365..27505 -
1681462915.2325613-CDS-Ecto-sp13_S_contig176:27916..280811681462915.2325613-CDS-Ecto-sp13_S_contig176:27916..28081Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 27917..28081 -
1681462915.242691-CDS-Ecto-sp13_S_contig176:28561..286811681462915.242691-CDS-Ecto-sp13_S_contig176:28561..28681Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 28562..28681 -
1681462915.2531447-CDS-Ecto-sp13_S_contig176:29069..291631681462915.2531447-CDS-Ecto-sp13_S_contig176:29069..29163Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 29070..29163 -
1681462915.266055-CDS-Ecto-sp13_S_contig176:29513..296061681462915.266055-CDS-Ecto-sp13_S_contig176:29513..29606Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 29514..29606 -
1681462915.2745585-CDS-Ecto-sp13_S_contig176:30140..302631681462915.2745585-CDS-Ecto-sp13_S_contig176:30140..30263Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 30141..30263 -
1681462915.2826989-CDS-Ecto-sp13_S_contig176:30761..309081681462915.2826989-CDS-Ecto-sp13_S_contig176:30761..30908Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 30762..30908 -
1681462915.2916846-CDS-Ecto-sp13_S_contig176:31617..317341681462915.2916846-CDS-Ecto-sp13_S_contig176:31617..31734Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 31618..31734 -
1681462915.3007548-CDS-Ecto-sp13_S_contig176:32057..322331681462915.3007548-CDS-Ecto-sp13_S_contig176:32057..32233Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 32058..32233 -
1681462915.3100004-CDS-Ecto-sp13_S_contig176:32897..330561681462915.3100004-CDS-Ecto-sp13_S_contig176:32897..33056Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 32898..33056 -
1681462915.3197954-CDS-Ecto-sp13_S_contig176:33448..335621681462915.3197954-CDS-Ecto-sp13_S_contig176:33448..33562Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 33449..33562 -
1681462915.3290467-CDS-Ecto-sp13_S_contig176:33865..340031681462915.3290467-CDS-Ecto-sp13_S_contig176:33865..34003Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 33866..34003 -
1681462915.3477097-CDS-Ecto-sp13_S_contig176:34307..343141681462915.3477097-CDS-Ecto-sp13_S_contig176:34307..34314Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig176 34308..34314 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig176.5314.1

>prot_Ecto-sp13_S_contig176.5314.1 ID=prot_Ecto-sp13_S_contig176.5314.1|Name=mRNA_Ecto-sp13_S_contig176.5314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=585bp
MDSAIPATTTDVIDNTDTTTDTTGGTKSVASTATSCGGVASGYYCCNAGC
GTCGGTGCGTRGDGCCASDAALSLCSATGMSPCLMESASTTTTTTVDGTT
TTTGGTTFTSTCTDYSKSTVTIEIKNNVETSSKKNGGKNYIRGGGCATLT
DIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVH
GPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNT
NYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDA
AESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHD
GGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNV
KIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAH
IYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASK
GWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCE
DVVWTNNRVPDDICLKGDKNTDYMKTYDSLPDLC*
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mRNA from alignment at Ecto-sp13_S_contig176:25406..34404-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig176.5314.1 ID=mRNA_Ecto-sp13_S_contig176.5314.1|Name=mRNA_Ecto-sp13_S_contig176.5314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8999bp|location=Sequence derived from alignment at Ecto-sp13_S_contig176:25406..34404- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTACTGGATGCGGCGGTAGAGGCGAAGGGTGCTGCACGAGCGACGCCGC GCTTAGCCTGTGCTCCGTCACCGGAAAGTCTCCTTGCCTGATGGATTGTA AGTTGTTGCACGTGCAGGGAGTGTCGTTCCACGATAGAACAAACCGCGAG AGCCGCATTCAATAGAGCTGCACGGACGCTTAGAAACAACCACGAGAGCC GTTGAGCACAAAGGTTGCTCCGTTTGCCCTTAAAAACCGACGGGCCTACC TCCCGTCAAGGCCGACCTCTCGCCAAGTGAGCCCCAAAGATGGTGCTTTA TCCGCACGGGTATTGCTTCGAATGAGCTAGCAAGCACCCACGATCCTGTT CGAACAATCAAAAGCTCTCGTCCCTCATACGACTTCCTCGACGTCACGCA GCCGCGATCCCCGCTACCACTACGGACGTCATCGACAACACGGACACCAC CACCGACACAACCGGCGGCACCAAATCGGTAGCTTCCACCGCGACGTCGT GCGGAGGAGTCGCCAGTGGCTACTACTGCTGCAACGCGGGTGCGTGAGCG TGTACAAGTTTGTAATCAGGCCTTGGCATTTGTTATCCCTCCGTCCCCGC TGACACCGTAAGGAGAGTTTCCTGTCAAGTTATGCCCTCATGACTCGGGG GGAAGTGCAGAGATATTAACAAGAGTTTCGGGCATATGGGCCATGGCTAC TGGGCACGACCCGACCGGACCGCACGTAAGTCCCCTTCCCCCTTTTCTCG AGCCCCGTAGATAACATCAATCCGAACACATGTGAGGGTGATCCCACAAT GTCCTTTTAACGAATCTCCCCTCTTCCTCACGCACACTACAGGCTGCGGC ACCTGCGGCGGTACTGGATGCGGCACGAGGGGCGACGGGTGCTGCGCAAG CGACGCCGCGCTTAGCCTGTGCTCCGCCACCGGCATGTCCCCGTGTCTCA TGGAAAGTAAGTCATCGGCATACTTGGAGGGAATGCATCAGTCCTCCGAT GATTTGATGTGACAAGTTTTCTTTTCGAGAAAAAATTCTGGGACTGCGTT ATCTTGATCCACTTTCGCTTCATTTACCAAGAGTCTTACTGGAAGTAGGA GCGTATAGGTGGCGTCTAAGTTGTTTCAACATTCATTGCAGTACGCTCTT CCAGGCATAAAATTTTCGCTGCTCGGCGTTGGAATAAGTACTGTTGACGT CCATGGTTCGGCGACAATCTACATTTCAAGAGAAAATCTTGTGCCTGGGG CTCAAGCAACCCCTAGCTTGTCATTTAGCCTGAACCCCCGCCCCCCCCTC TTTCCGCCTAACGCCCGCTGCGCGCTTTCAACCGCGCGCTCGCCGCAGGT GCGTCAACGACGACCACCACGACCGTCGATGGGACCACCACCACGACCGG CGGCACGACGTTCACCTCCACCTGCACCGACTACAGCAAATCCACCGTCA CAATCGAAATCAAGAACAACGTCGAAACCAGCTCCAAGAAGAACGGAGGG AAGAACTGTGAGTCAGGAGAAATACGCTACCTTTGGTTACCGCGTCGACG ATACCACATGCCACAATCTTCAGTACCCCGTCAGGCAGGCTTTCCTTTCT CTGCCCAATGGGCGATAGCAATGGGGGTGGTCGACCGTCATATTGCAAAC CGAAGCGAAATTGAGTTTTTTTAGGACCACGTGTAAGAAGGCAAGCTTGG CTCCAGAGAATTCGTGCCTCCGCGCATGCTTCGTAAGACCCTACCCTTAT CGTTGCTTTTGTTTCACCAAGTCACCATACAATCGTGCGCCCTAATTTGA TGGTGGTGGTCGGGTAACACCCTCAGCCCCTTCGTGCGTTACAGTGCATT TAGTTGCAATGGTGGTGAAGGTGCCACAGGGTAAGCACGTTTGCCTTTTC ACTTGTCCATGCCCTAGTGCAAGGGAAATTTGCCTGCAAAGCAGGGTGTG GAACACATGGCATGTTCTGGCAACGCCCTCATCATCCCGGTTCGCTCCAC TAACGGGCACAATGGTGGTTGTCGCATCGAAGCAGTGTCCTACATGTACC CTGTAGCTGAAGCATTGTACCCGCAGCCGCCAGCTCCCGGCCCGAACTCG AAGATCGCCCACCGCTCTGCCGTCGCCTGATCAACTCGAACCTTCTTTGG GCTCCCTCAATCACCCCGCAGACATCAGGGGAGGGGGATGCGCCACCCTA ACCGACATTTACACCGCCCAGGGCGGGCACAACGACGACGGCCCCCTGTT CGTGCTCGACTCGAACGACAATGTTGTGGGCGGAAGCCCTACCGGGTACT GGTTGCTGATGAGGGACATCCATGTCGAAGAGGACTCATTGCTTCAGGTA AAACGGGATCTATATGATAATGTTTTCTGCAGCTGGGTAAACTCGTTTTG GGGTGGAGTTCTCTTGCCGCTCGTCGTGGCTGAGCAGCAGCGAAACGCCG GTATCAAAATGCTGTTCTTTTCATCCTTGTTGTCAACGTTAGGTCTTGCC CCTCGAAGAAATAATGCCTATCCAGGTTGGTTGCGCAACAGCGTTCATCC GCTGGGCGTTGATTCAAACATTTGAATATGCATTCAGTTTTTTTGGCATA CAACCACAAGGCGTTAGCACACGTGAACGTCTATCGCGGTGGTGCTTTTT GGCGTGCATGATGTGATCAGGTGCACGGGCCAGACGCTGGCGGAGACGCC AGAGTTCTTCGGATCCAGTCGACCGGATCGAGCGACTACTACGAGATTCG CGGTCACGGAGGCAGCCTGTCTTTCATGGACACCAAGGTAATGGTTGTTG TCGTGGTGGTTGGTATCGGTGGTGGCGGCGGCGGCGGCGGCGGTATTTGG AACTGTATTGGTATTGTGCCCAGGCATCGTGCAACACTCAACATTATTAG GAAACACGAATACAAGCACAGAAAGACTACCCATTCGAGATAAGACGACA GTCGAACGGGATGTGTTCAAATTTTAACAGTTAATGGAGGGAAACCGGCT GGGTACTGGGCTTATTTGGAGTCTATTTAAGCCTACGCACTGAAATGTTT TGATCAGTGATGCCAGCAGGTGCTTATCACAAAATCACTGTAAAAGGTAC AAATACTGCAAGACATCTCCCCCGTATTGTTCTCTATCTACGGGATCAAC GACATAATATATATAAGATCGGTCTTTTCGAAGGCCTGCCGCGTTACTGT TGATATTGAAGATACTCCTGGCAGTAATATTCCCTTGCCGGGGCTCGCTG TGTTGCTGAAGCGAGTGGTGATGGTCTTGGTATTCATGTTTGTTGTACTA CGTGTTTCAGGTGACGTCGTCCAATGCACCTGAATGTCACCGCTCTCAAT CTGCTCGTGGTGAGTCACAACAACAGCGAGGTTTGACACTAGCAGCGACG AAATGGCTTCGCCACGTCGCCGACCCTCCTCCTCCTTGACGGCTCGTGTC TTCTCTCATCCTATGCGTTGGTGGGGTCTTCCGTTCAAATGCGCAGGTAA CATCCTGGGACACCGATGAGAAGGAGGTGAACACCAACTATGAAAAGGAG AGGTCCTTCATCAGGTGTGTCAGCGAGGAGCTTGCGGACAACCCGGACAC GTGCGACGGGCACGCAGTTAACCACATGGGGGAGTGCAGGATGGTGAGAG GAGAGCGAGAGCATGATGGTGGTGGTATGGTTGTTGTTGATTATATAGTT GAAGTTCAGCTAAATTATCGGGTCAAACGCTCTTTGGTCGGCGCTTCTCC GCAGCTATCCGTGAGCCCACCTCCACTGTTGTTTCTCTTTCTCCTGTAAT CCTCCGCGGGTTTTGCACGCAAGCAGATTAGTTATGATTCGAAATATGTT TAGACGTACCTCATCATTCAAAAAAGGCCAACCAAATCCGTAAACAGCTG CGTAAACAGCTGCGTGACGGGCCACATGCTATGTAGTCTCCGAACACCCA AAGCTCTGTTCGCCGATGGATGTTGTCTCCCGCTGACTCGACAATTGTAG CTTTCAGTGGCGAAGAACATTGATTCTCCTTTTCCGCCCCATCACGCCAT TCTAGCTGTACAACTACAACTACCGAACCCCCCTTTCAAACATACCAAGC GTGCACTAAAATCACGACGGCGACGAATCCTCACCGTGCAGGACATCATC AGATCCGAGATGGGGGAAATGGGTTACGACGCCGCCGAGAGCTACGGTAT CTCTTGGAAGGTCCGAGGGTACTGCTCCGAGGACCCCAACCCGGAACTCT TCGAGCGCACCCGGGTAACTATGGACGAGCCGATGTTTAATCTTTGGAAT CGTAGCAGCTACTGCTGCTGTTCAGTAGCGACCCGTCGCTTCGCCCGATT AATTACGTCGTAGTCGTTGTCGTTGTTGCTGCTGTTGATGTTGACGCGGC TATTGTATTGGTTGTAGTTTTGGGGGGTGAGATCTCGTGATGTTCTTGTT GTCAGCATTGGTGCTGACTTGATATCTTACATACCGATTGAAGAACGCCA TCCCGAATACCAAAAGTTGGGCCATCTATGACAGCTGTACATTGACCCTA CTTCTATCGAAATTCGATTGATGAATTTGATTTTTCGATGTGTACCTGCA TAACAACTACTTTTTGGGCGGTTAATGCTAATCGCGACCCCCCAAGTAGT TTGTTTGCCCCAGCTTTTTCTCCTGACCCCCTGAAACGTACACGCCTAGC TGTTGAGTCAACTCCGTGAACAACCACACCACTTTAGCTGCGCCAGCTGA GCAAGTCTCCGTGTTTGCCACTTACCACGAATTCCACACACCAACCAGGT CCGTGGTGACATCATCGACTCGGATATCTACGGCATGTACTACGGCCACT ACTCTTTCGGCCATGACGGAGGAATATGGACTGGGAACAAGGTACACACG TGCCGGCATTGTCCAGGCCTCGCTCGCATTGTTACGTCTTTCGTGCATGC AAAATTTGGTAACACACCGCATGAAGGCTGTTTTTATTTTCTGGGCCAAC TTTCGGAAATCGACCATATGGTATGCGATACTCCGAGTGTGGCCCCATGC TTGTGTAGTTGACGACGAGGATTGAGGATGTGGCCCAGGGCTCTCAACAA TGTGGCCGATCATTCAAGACCTGCTTCTGAGGCATAACTGCTTGCGTTTG ATCTCACTTTTCCCTTTTCCCTTTTCCCTGCCCGTGAATGCTGCTGCCGA TGGTGATGATTGTGACGATGATCGATCGAAAATATTCCCAGATGCACGAC AACGCGCAGTACGGCTTCGACCCCCACGACGACTCCGACAACTTGGAGAT CGCCTACAACACTGTCTGGGGGAACGGCAACCACGGTACGAGAGAAGGCT GTTTGTCCGGTCTCGCGTGTTGTTATCATCCGACCTAGAGCATGTTCCCC GCCCTTCGAGGGCATCAGCTTATGCCCGTTTCTCTGGCTTGTGTCTCTAT TCTCACTACCAACCGATGGTGAGCCGAGGCTGCGCAGATGTCAGAGAAAT AGCCTGCTGCTGTGCTGCTGCCCTTCTTACAAAGATTACCGTCCGGAAAC GACAGTTTGATAGCGGTACTCCAATAGTCAATGGTGATGCCCGAAAGGCG GATGCTTGGGTTACGGAAGACCAAACCCGCTTAGAGGCGTGCAACGGATC GTATGACGTTCCGGCGGGGTTCCATGACGAATCTTCTTCCTTTCACGCTG CTTGTTGTGCGCTTTTCTCGTAGGCATCATCGCCTCCAAGCGCTGCAACA ACGTCAAGATCCACCACAACACTGTGTACGACGGGGGGGAAGGCGCGGTT GGCATTTTCCTCCACCGAAGCTCCGACGACTGCGAAGTCTGGGGTAAGGG CCGTTTTAGTCATGGCTTTTTTTCCAAATTTCCATATTACGAAAATTTGG AAGTGACCAGGGTCCCAAAACTTTGGAATGGTAGCTTTCAAATTCTTGGA AAGTTTCCTTAGGTATTGCCTTCGAACTCGCCGCGCAAAGCTTCCAAGGT TGGGAATATTCCAAATATTTGGAAAGTAAGTGCTTTGTTTAAAACGACCC TCAGCTAACCGACGAAGTCTCCGTGCTTGCTTGTCTTGAAAGAAAACACC TGTGTGCAGGCGAAGCGATGCATTGTAGAGGGCACAGCCCGAAGCAACCA AACTGACAGCGAGGGTAGATGTCCTTTCTGCCTGGCGTAGCGTGCCCTCT CCCTTACTCGCCTCGTTTGTTCTTGCTGCAGACCAAACGATACCCTCTTC CATTCTTCGCTCTCGACCCTCGATCCTCTCCCAATTTTGCCTTCTTCGCG ACCATCTGTACGCCTTGCGCCAGAAAACACTGTCTACGACATGGAGGACG CGGGGATGGCCATCATGGAGTCGATGGGCGCTCATATCTACGACAACACT TTCACTAACGTCAAATACGGCATCCGACTCTCCGTCGGTGCTGCGCGCAA CATTGTGGAGAACAACAGCTTCTTGGAATGCGACCAATGTGAGTTCTGTG TGGTCTTGTTCCGCTCCCTGAAACCGTGAAACACGGGAAATTTCTAGAAA ATGTTTATCTCCGTCTTGAATAATGTTTATTTCGAAGCCCACAGACAAAT TGAAGTTGGGCCGGGCTTTCAGTGCGTCCCCACTTTCAAGATACATGCAT GCGAAAAGCACTACCTACCGCGACACCATGGGGTCTCGATAGCTAGCGGG TAGAAACGTTGTGGACTATTGCGTTGTTTTCTCCTCGTTGCTCGGGGACC AGTCGAGAGTTGCGGAAGACTTGGCACCCAGAGAGGAGGCTTGTGAAGGA GAACCACTTTAGATGAGCCCACAAAATACCCACCCTTATTGTGATGTCAA CATGCCTAATCACACTCTGCTTGTTCCTCCCATCTTGTTGACGTGTCAGA CGGTATCTACACGTACCAAGGAAACGACGAACCCGAGGCCTCCAAAGGCT GGGACGGACTATTGGTGGACAACACCTTCCATGCCAACACTGTTGAGGGC GGCGTCAAGATCCAGAAGGCCGAGGGAATCGCCTTTACCGGTGAGTCCCC ATGTCGAAATGAATTGGTGTCGCAGCAAACGAACGACTTGGCAGATGGAC GCTCGTTCACACTCGTCGAAGCTAACGTTAATATATGTCGTTGTGCGAGG CGATTCTACAAGAGACCCGCGAGGTGGAAGCGTCAGTGCAGAGCAGGAGG AACAGCATGCAGCGAATACGACGTTTGGAATGTGTTGAAGGAGGCATTTT GGTGTAAGTCGCTTCTTGGCAACTCCTTTGATGCTCTTTGGTTGTTACGT TTACGTGTACCTTCTTCTGCGATGCGTATACTGCTGTAGCTGAAAGCCGC ACTTTTGCATTGATAAAGCGCTCACAGCTTACAGCATTTCTGCCGTGTAG GCGCTCCAATCCGTGATCACTCAGAAGGGTTCCTCTCCCCCAACCCCTCG TGCGGTGCAATGTCGTGATCATCGGCTGCTGGGAGTCTACCTCGATGAGC GCAGCAATATGAAGTTGGTTGTGGCGTACAATAGTGGTTACGTTGAGTGC TGCATGAAATATTACCAACATCAAGCGCACAAATTTAATGGGGTGCAGGC CCATATCTTAGCTTGAATTGTCGGAAAATCCAAAGACGTTGAGAAAATCC CGGTATCGTGGACAATTGGTCACTACATGCCCTGTGCCACCCCTCCTCCA CAAGCCACTCCTGAGCCAAGCACTAAGGGCGCCCGACAACACGCCCGGAA TAGGGGCGTAAAGAAAACGCCATGTTTTCTGTACTAACACCCTCCTCGTC GCGCGTCCTTCCATCTGGCAAACGAAAATATCAACAGACAACAAGTTCTA CGAGCACAGCAGCGGCGAGGAGTACCGATTCGAGGATTGCGAAGACGTCG TCTGGACAAACAACCGGGTCCCCGATGATATCTGCCTCAAGGGGGACAAG AACACCGACTACATGAAAACCTACGATAGCCTGCCCGACCTGTGTTAATT TTTTTCGGGGAGGGCCCCTCTAGTCTTCTCCGTCCCACGTTTGTGTGTGT AGTAAAAAACAGAAACGCCCTGCCCAGCGGAAAATTTAGGCCATCGGGTT GTTTCGATTTGTTGCGTAGGTTCCAACAAGGACGCCTGCACTGGTCCAGA TGGTGGGGTGTCGGTCGTAGTTCAGATCTACAGTAGTATGTGTGCCTACC CTCCTGTTTGGGGGTATCCCTAATATCATGGCAATTGGGAGGGCCTCAGA TCTGGCGTAGGGAGTTACATGAACTTATATATCAAGAGGCTATAGAGGGG AAAATAGACGGGATGTTGCGCAGTTCATGATTGAAGGATTTCCTGCATCA TGTGCATAAAAATCAAGGGGGGGGGTCTTGTAGTGGTGATGGTCGATGTG TTCAATGACCAGACTTCGGGAAACACCTTGCGAGGGAGTGCGAGGTACCG TGCTCGGATTGGACGCGAGATAGACGATACCTCACCGCACTGTTTCGTGT TTGCTCGCCTTTGCGTGCGTCGATGAGTTGCGTTTGTTGGGTAGAAACTC ATCGGAGAAACAGCGGGGAAACAACAACAACTGACTTCGGAAACTATTGC TTAGTATGTAGGCAATGTTGTTCTTGACAAACAACGAGAGAGCTCTGCAA CGCGTTGTTGTGCTCAGCCCGGTCAACTAAGTGGTCCTACGTCTACACAA ACGTGTTTGTAGGTGACAAAAGTTGCATGTTTTTGGGGGGCTCTTCCTTA AAACTGCAGACTGTGTATTCCCACGATATGTTATTTGTGTGGACCATTTT GAGAGTAGTCTCGTTGACTGTGCCACGGCACCCCCAGCCGTAAAAGCAAG CCTCCTAGACTATTTTCTAAAGATACAGACGGATTCGTTGTGCCATGCAT ACTAAATAAGAGTTATGATGAATGGAAACCTTGCCTAGCAGATCGTGATA AGTAACGAGACGTGTGTGTGAATAAAACATTTGGTCAAGGAAGGGAGCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig176:25406..34404-

>mRNA_Ecto-sp13_S_contig176.5314.1 ID=mRNA_Ecto-sp13_S_contig176.5314.1|Name=mRNA_Ecto-sp13_S_contig176.5314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1755bp|location=Sequence derived from alignment at Ecto-sp13_S_contig176:25406..34404- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGATTCCGCGATCCCCGCTACCACTACGGACGTCATCGACAACACGGA
CACCACCACCGACACAACCGGCGGCACCAAATCGGTAGCTTCCACCGCGA
CGTCGTGCGGAGGAGTCGCCAGTGGCTACTACTGCTGCAACGCGGGCTGC
GGCACCTGCGGCGGTACTGGATGCGGCACGAGGGGCGACGGGTGCTGCGC
AAGCGACGCCGCGCTTAGCCTGTGCTCCGCCACCGGCATGTCCCCGTGTC
TCATGGAAAGTGCGTCAACGACGACCACCACGACCGTCGATGGGACCACC
ACCACGACCGGCGGCACGACGTTCACCTCCACCTGCACCGACTACAGCAA
ATCCACCGTCACAATCGAAATCAAGAACAACGTCGAAACCAGCTCCAAGA
AGAACGGAGGGAAGAACTACATCAGGGGAGGGGGATGCGCCACCCTAACC
GACATTTACACCGCCCAGGGCGGGCACAACGACGACGGCCCCCTGTTCGT
GCTCGACTCGAACGACAATGTTGTGGGCGGAAGCCCTACCGGGTACTGGT
TGCTGATGAGGGACATCCATGTCGAAGAGGACTCATTGCTTCAGGTGCAC
GGGCCAGACGCTGGCGGAGACGCCAGAGTTCTTCGGATCCAGTCGACCGG
ATCGAGCGACTACTACGAGATTCGCGGTCACGGAGGCAGCCTGTCTTTCA
TGGACACCAAGGTAACATCCTGGGACACCGATGAGAAGGAGGTGAACACC
AACTATGAAAAGGAGAGGTCCTTCATCAGGTGTGTCAGCGAGGAGCTTGC
GGACAACCCGGACACGTGCGACGGGCACGCAGTTAACCACATGGGGGAGT
GCAGGATGGACATCATCAGATCCGAGATGGGGGAAATGGGTTACGACGCC
GCCGAGAGCTACGGTATCTCTTGGAAGGTCCGAGGGTACTGCTCCGAGGA
CCCCAACCCGGAACTCTTCGAGCGCACCCGGGTCCGTGGTGACATCATCG
ACTCGGATATCTACGGCATGTACTACGGCCACTACTCTTTCGGCCATGAC
GGAGGAATATGGACTGGGAACAAGATGCACGACAACGCGCAGTACGGCTT
CGACCCCCACGACGACTCCGACAACTTGGAGATCGCCTACAACACTGTCT
GGGGGAACGGCAACCACGGCATCATCGCCTCCAAGCGCTGCAACAACGTC
AAGATCCACCACAACACTGTGTACGACGGGGGGGAAGGCGCGGTTGGCAT
TTTCCTCCACCGAAGCTCCGACGACTGCGAAGTCTGGGAAAACACTGTCT
ACGACATGGAGGACGCGGGGATGGCCATCATGGAGTCGATGGGCGCTCAT
ATCTACGACAACACTTTCACTAACGTCAAATACGGCATCCGACTCTCCGT
CGGTGCTGCGCGCAACATTGTGGAGAACAACAGCTTCTTGGAATGCGACC
AATACGGTATCTACACGTACCAAGGAAACGACGAACCCGAGGCCTCCAAA
GGCTGGGACGGACTATTGGTGGACAACACCTTCCATGCCAACACTGTTGA
GGGCGGCGTCAAGATCCAGAAGGCCGAGGGAATCGCCTTTACCGACAACA
AGTTCTACGAGCACAGCAGCGGCGAGGAGTACCGATTCGAGGATTGCGAA
GACGTCGTCTGGACAAACAACCGGGTCCCCGATGATATCTGCCTCAAGGG
GGACAAGAACACCGACTACATGAAAACCTACGATAGCCTGCCCGACCTGT
GTTAA
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