prot_Ecto-sp13_S_contig17596.5310.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17596.5310.1
Unique Nameprot_Ecto-sp13_S_contig17596.5310.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length138
Homology
BLAST of mRNA_Ecto-sp13_S_contig17596.5310.1 vs. uniprot
Match: D7FHL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL5_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 4.360e-83
Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 0
Query:    1 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEIIAAAKAANAHDFIKSFPEGYNTGVGEGGFQLSGGQKQRI 138
            PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKST+TKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQ+IGYVGQEPVLFAGTIALNIANGKLG+TQDEII AAKAANAH+FIKSFPEGYNTGVGEGGFQLSGGQKQRI
Sbjct:  381 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTITKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQRIGYVGQEPVLFAGTIALNIANGKLGSTQDEIITAAKAANAHEFIKSFPEGYNTGVGEGGFQLSGGQKQRI 518          
BLAST of mRNA_Ecto-sp13_S_contig17596.5310.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 1.810e-81
Identity = 135/138 (97.83%), Postives = 138/138 (100.00%), Query Frame = 0
Query:    1 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEIIAAAKAANAHDFIKSFPEGYNTGVGEGGFQLSGGQKQRI 138
            PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLG+TQDEIIAAA+AANAH+FIKSFPEGYNTGVGEGGFQLSGGQKQRI
Sbjct:  370 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGSTQDEIIAAARAANAHEFIKSFPEGYNTGVGEGGFQLSGGQKQRI 507          
BLAST of mRNA_Ecto-sp13_S_contig17596.5310.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 6.420e-76
Identity = 129/139 (92.81%), Postives = 135/139 (97.12%), Query Frame = 0
Query:    1 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGA-TQDEIIAAAKAANAHDFIKSFPEGYNTGVGEGGFQLSGGQKQRI 138
            PARPNDVVY SLSLEVAVGKTLALVGPSGGGKST+TKLLLRFYDPTSG+V+LDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTI LNIANGK GA TQDEI+AAAKAANAHDFI+SFP+GYNTGVGEGGFQLSGGQKQRI
Sbjct:  400 PARPNDVVYNSLSLEVAVGKTLALVGPSGGGKSTVTKLLLRFYDPTSGSVSLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIGLNIANGKHGAATQDEIVAAAKAANAHDFIESFPDGYNTGVGEGGFQLSGGQKQRI 538          
BLAST of mRNA_Ecto-sp13_S_contig17596.5310.1 vs. uniprot
Match: A0A6H5JGF0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF0_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 1.170e-65
Identity = 112/116 (96.55%), Postives = 113/116 (97.41%), Query Frame = 0
Query:    1 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEIIAAAKAANAHDFIKSFP 116
            PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEII AAKAANAH+FIK  P
Sbjct:  480 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEIITAAKAANAHEFIKFHP 595          
BLAST of mRNA_Ecto-sp13_S_contig17596.5310.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA)

HSP 1 Score: 222 bits (566), Expect = 1.140e-64
Identity = 110/138 (79.71%), Postives = 121/138 (87.68%), Query Frame = 0
Query:    1 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEIIAAAKAANAHDFIKSFPEGYNTGVGEGGFQLSGGQKQRI 138
            PARP+DVVYG + L VA G+TLALVGPSGGGKSTMTKLLLRFYDPTSG + LDG DI+SLN+ WYRQQIGYVGQEPVLFAG+I  NIANGK GAT +EII AAKAANAH+FIK FP+GY T VGEGG QLSGGQKQR+
Sbjct:  339 PARPDDVVYGRIDLSVAEGETLALVGPSGGGKSTMTKLLLRFYDPTSGAIKLDGMDIRSLNLNWYRQQIGYVGQEPVLFAGSIRDNIANGKPGATDEEIINAAKAANAHEFIKGFPKGYRTDVGEGGLQLSGGQKQRV 476          
BLAST of mRNA_Ecto-sp13_S_contig17596.5310.1 vs. uniprot
Match: A0A835Z4J1_9STRA (ATP-binding cassette, sub-family B, member 1A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J1_9STRA)

HSP 1 Score: 217 bits (552), Expect = 9.700e-63
Identity = 109/138 (78.99%), Postives = 120/138 (86.96%), Query Frame = 0
Query:    1 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEIIAAAKAANAHDFIKSFPEGYNTGVGEGGFQLSGGQKQRI 138
            PARP+  VY  +S+ VA G+TLALVGPSGGGKSTMTKLLLRFYDPTSG + LDG DI+SLN+ WYRQQIGYVGQEPVLFAG+I  NIANGK GAT DEII AAKAANAH+FIK FP+GYNT VGEGG QLSGGQKQR+
Sbjct:  442 PARPDAPVYEGVSVGVAEGETLALVGPSGGGKSTMTKLLLRFYDPTSGAIKLDGMDIRSLNLNWYRQQIGYVGQEPVLFAGSIRDNIANGKPGATDDEIINAAKAANAHEFIKGFPKGYNTEVGEGGLQLSGGQKQRV 579          
BLAST of mRNA_Ecto-sp13_S_contig17596.5310.1 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA)

HSP 1 Score: 214 bits (546), Expect = 5.890e-62
Identity = 104/138 (75.36%), Postives = 119/138 (86.23%), Query Frame = 0
Query:    1 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEIIAAAKAANAHDFIKSFPEGYNTGVGEGGFQLSGGQKQRI 138
            PARP++VVYG + + +  G+TLALVGPSGGGKSTMTKLLLRFYDPTSG + LDG DI+SLN+ WYRQQIGYVGQEPVLF+G+I  NIANGK GAT +EI  AAKAANAH+FIK FP+GY T VGEGG QLSGGQKQR+
Sbjct:  338 PARPDEVVYGRVDISIQEGETLALVGPSGGGKSTMTKLLLRFYDPTSGCIRLDGADIRSLNLNWYRQQIGYVGQEPVLFSGSIRDNIANGKPGATDEEITNAAKAANAHEFIKGFPKGYGTNVGEGGLQLSGGQKQRV 475          
BLAST of mRNA_Ecto-sp13_S_contig17596.5310.1 vs. uniprot
Match: A0A6H5J5U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5U8_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 2.490e-58
Identity = 109/138 (78.99%), Postives = 112/138 (81.16%), Query Frame = 0
Query:    1 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEIIAAAKAANAHDFIKSFPEGYNTGVGEGGFQLSGGQKQRI 138
            PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQ+ Y        AG                 +IAAAKAANAH+FIKSFPEGYNTGVGEGGFQLSGGQKQRI
Sbjct:  322 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQVRYC-------AG-----------------VIAAAKAANAHEFIKSFPEGYNTGVGEGGFQLSGGQKQRI 435          
BLAST of mRNA_Ecto-sp13_S_contig17596.5310.1 vs. uniprot
Match: D8LS12_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS12_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 1.100e-56
Identity = 100/138 (72.46%), Postives = 117/138 (84.78%), Query Frame = 0
Query:    1 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEIIAAAKAANAHDFIKSFPEGYNTGVGEGGFQLSGGQKQRI 138
            P RP+D V  S+S+ V+ G++LALVGPSGGGKST+TKLLLRFYDPTSG++ LDG D+KSLNV +YR +IGYVGQEPVLFAGTI  N+A+GK  AT +EI+ AAKAANAHDFIKSFP+ Y T VG GG QLSGGQKQRI
Sbjct:  409 PTRPDDKVLDSVSISVSPGESLALVGPSGGGKSTVTKLLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVTAAKAANAHDFIKSFPDAYATDVGTGGLQLSGGQKQRI 546          
BLAST of mRNA_Ecto-sp13_S_contig17596.5310.1 vs. uniprot
Match: A0A7S2RE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RE90_9STRA)

HSP 1 Score: 176 bits (445), Expect = 3.630e-53
Identity = 89/138 (64.49%), Postives = 103/138 (74.64%), Query Frame = 0
Query:    1 PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEIIAAAKAANAHDFIKSFPEGYNTGVGEGGFQLSGGQKQRI 138
            P RP   V+  L+L +  G T+ALVGPSGGGKST   L+ RFYDP SGTV+LDG D+  +NV+  R  +GYVGQEP LFA TIA NI  GKL ATQ+EIIAAA+ ANAHDFI SFP+ Y T VG+ G QLSGGQKQRI
Sbjct:   41 PTRPQSAVFKGLNLHIKAGSTVALVGPSGGGKSTTVSLIERFYDPLSGTVSLDGVDLTEINVSHLRSLVGYVGQEPTLFATTIAGNIKYGKLDATQEEIIAAARMANAHDFIMSFPDKYETQVGDSGSQLSGGQKQRI 178          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17596.5310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHL5_ECTSI4.360e-8396.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHL4_ECTSI1.810e-8197.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHL1_ECTSI6.420e-7692.81ATP-binding cassette, sub-family B (MDR/TAP), memb... [more]
A0A6H5JGF0_9PHAE1.170e-6596.55ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CGZ9_9STRA1.140e-6479.71ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A835Z4J1_9STRA9.700e-6378.99ATP-binding cassette, sub-family B, member 1A n=2 ... [more]
A0A836CDG9_9STRA5.890e-6275.36ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A6H5J5U8_9PHAE2.490e-5878.99ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LS12_ECTSI1.100e-5672.46Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S2RE90_9STRA3.630e-5364.49Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 11..138
e-value: 2.2E-24
score: 86.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..138
e-value: 7.1E-68
score: 231.3
NoneNo IPR availablePANTHERPTHR24221:SF501LP14331Pcoord: 1..138
IPR039421Type I protein exporterPANTHERPTHR24221FAMILY NOT NAMEDcoord: 1..138
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17596contigEcto-sp13_S_contig17596:1341..3058 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17596.5310.1mRNA_Ecto-sp13_S_contig17596.5310.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17596 1341..3060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17596.5310.1 ID=prot_Ecto-sp13_S_contig17596.5310.1|Name=mRNA_Ecto-sp13_S_contig17596.5310.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
PARPNDVVYGSLSLEVAVGKTLALVGPSGGGKSTMTKLLLRFYDPTSGTV
TLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGATQDEII
AAAKAANAHDFIKSFPEGYNTGVGEGGFQLSGGQKQRI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR039421Type_I_exporter
IPR027417P-loop_NTPase