prot_Ecto-sp13_S_contig17593.5309.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17593.5309.1
Unique Nameprot_Ecto-sp13_S_contig17593.5309.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length208
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17593.5309.1 vs. uniprot
Match: D8LMV5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMV5_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 4.610e-120
Identity = 202/208 (97.12%), Postives = 204/208 (98.08%), Query Frame = 0 
Query:    1 MASATRKLYLVAMMICATSLRCYAFSTTTPCSSSRVADQHIMSNSPTTPRTGRGRCGSSMEMKGRNEDGQKRRISSSSSGSMNRGGFVRAAAAAALTLTVAGHRTTSPARAVGVQPGEXXXXXXXXLLLVPALRAKLAVQSVLKLMKDPEKWDEAREALKSPPLAPADFKECFRTYSDADPEQHLAFDLYRIQAQDALKAVSELLAYL 208
            MASATRKLYLVAMMICATSLRC AFSTT+ CSSSRVADQHIMSNSPTT RTGRGRCGSSMEMKGRNEDGQKRRISSSSSGS+NRGGFVRAAAAAALTLTVAGHRTTSPARAVGVQPGEXXXXXXXXLLLVPALRAKLAVQSVLKLMKDPEKW EAREALKSPPLAPADFKECFRTYSDADPEQHLAFDLYRIQAQDALKAVSELLAYL
Sbjct:    1 MASATRKLYLVAMMICATSLRCDAFSTTSSCSSSRVADQHIMSNSPTTRRTGRGRCGSSMEMKGRNEDGQKRRISSSSSGSVNRGGFVRAAAAAALTLTVAGHRTTSPARAVGVQPGEXXXXXXXXLLLVPALRAKLAVQSVLKLMKDPEKWGEAREALKSPPLAPADFKECFRTYSDADPEQHLAFDLYRIQAQDALKAVSELLAYL 208
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17593.5309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMV5_ECTSI4.610e-12097.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..208
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.675

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17593contigEcto-sp13_S_contig17593:1..3104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17593.5309.1mRNA_Ecto-sp13_S_contig17593.5309.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17593 1..3104 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17593.5309.1 ID=prot_Ecto-sp13_S_contig17593.5309.1|Name=mRNA_Ecto-sp13_S_contig17593.5309.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp
MASATRKLYLVAMMICATSLRCYAFSTTTPCSSSRVADQHIMSNSPTTPR
TGRGRCGSSMEMKGRNEDGQKRRISSSSSGSMNRGGFVRAAAAAALTLTV
AGHRTTSPARAVGVQPGERTTAPPNALLLVPALRAKLAVQSVLKLMKDPE
KWDEAREALKSPPLAPADFKECFRTYSDADPEQHLAFDLYRIQAQDALKA
VSELLAYL
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