prot_Ecto-sp13_S_contig17592.5308.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17592.5308.1
Unique Nameprot_Ecto-sp13_S_contig17592.5308.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length482
Homology
BLAST of mRNA_Ecto-sp13_S_contig17592.5308.1 vs. uniprot
Match: A0A6H5KID0_9PHAE (Beta_elim_lyase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KID0_9PHAE)

HSP 1 Score: 660 bits (1702), Expect = 7.950e-228
Identity = 439/475 (92.42%), Postives = 445/475 (93.68%), Query Frame = 0
Query:    1 QVSGPDIQRTVSMMKEVLEEAGLNPLGVSRTPRYNAEDELEWHSPDDVEAAAXXXXXXXXXXDPTASPDQLGGTANGIVDGDEVVIVSEISNAVSGDAGPDSRGFPDSSFADAKTVVSPEMGSDGAATAELSTSAAAGXXXXXXXXAEAGLEAGGGADGLGEEGAGEKDKDELPPFVEKFEEVELQGMAVSTEGFVAIMTSKESTRALRLVVTPDDPMSGGLDVEQAETSEARTLLQLMQGIDVARHLPHDALGNLMDLSMRTGVQLSTVYVSHISPFSATLMAKVPQRDGETAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GVPETPVSPSVPGTTMGSGFGRPRLGLSKIAETTNAFEALGLALRYPSSRIFVRAELLAPTAEGGEAMGRKDSSSASSFESGDLAELYPNLMKLTDAKERRSASERMDSQFEMQKIRQQLESAV 474
            QVSGPDIQRTVSMMKEVLEEAGLNPL VSRTPRYNAEDELEWHSP++VEAAA XXXXXXXXX   ASPDQLGGT NGIVDGDE VIVSEISNAVSGDAGPDSRGFPDSSF D KTVVSPEMGS  A TAELSTS AAG        AEAGLEAGGGADG+GEEGA + D DELPPFVEKFEEVELQGMAVSTEGFVAIMTSKESTRALRLVVTPDDPMSGGLDVEQAET EARTLLQLMQGIDVARHLPHDALGNLMDLSMRTGVQLSTVYVSHISPFSATLMAKVPQRDGETAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GVPETPVSPSVPGTTMGSGF RPRLGLSKIAETTN+FEALGLALRYPSSRIFVRAELLAP AEGGEAMGRKDSSSASSFES DLAELYPNLMKLTDAKERRSASERMDSQFEMQKIRQQLESA+
Sbjct:  427 QVSGPDIQRTVSMMKEVLEEAGLNPLVVSRTPRYNAEDELEWHSPENVEAAAAXXXXXXXXXXXAASPDQLGGTVNGIVDGDEAVIVSEISNAVSGDAGPDSRGFPDSSFTDVKTVVSPEMGSGSATTAELSTSTAAGAEGAGGGSAEAGLEAGGGADGVGEEGAEDDDNDELPPFVEKFEEVELQGMAVSTEGFVAIMTSKESTRALRLVVTPDDPMSGGLDVEQAETPEARTLLQLMQGIDVARHLPHDALGNLMDLSMRTGVQLSTVYVSHISPFSATLMAKVPQRDGETAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPETPVSPSVPGTTMGSGFSRPRLGLSKIAETTNSFEALGLALRYPSSRIFVRAELLAPPAEGGEAMGRKDSSSASSFESRDLAELYPNLMKLTDAKERRSASERMDSQFEMQKIRQQLESAM 901          
BLAST of mRNA_Ecto-sp13_S_contig17592.5308.1 vs. uniprot
Match: K8Z7D4_NANGC (Threonine aldolase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z7D4_NANGC)

HSP 1 Score: 84.7 bits (208), Expect = 3.210e-14
Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = 0
Query:  182 EVELQGMAVSTEGFVAIMTSKEST-----------RALRLVVTPDDPMSGGLDVEQAETSEARTLLQLMQGIDVARHLPHDALGNLMDLSMRTGVQLSTVYVSHISP------------FSATLMAKVPQRDGETAAA 296
            +V +QG++ S  GFV ++  KE             +AL++VVTP DPMS GLDV  AET EA TLLQL+Q IDV  +L HDAL +L+ +     V L  V +  +S             F A L  +V   +G +++A
Sbjct:   81 DVVVQGVSTSERGFVVVLAEKEGEGQEGSEGGRPRKALKVVVTPSDPMSAGLDVHAAETPEAITLLQLLQDIDVGSYLKHDALSSLVGVRAGHPVSLKRVVIEQLSAGRGVGGNNSNKRFKARLEVEVGDMEGASSSA 218          
BLAST of mRNA_Ecto-sp13_S_contig17592.5308.1 vs. uniprot
Match: A0A4D9CZ25_9STRA (Beta_elim_lyase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ25_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 5.350e-14
Identity = 58/159 (36.48%), Postives = 80/159 (50.31%), Query Frame = 0
Query:  161 GEEGAGEKDKDELPPFVEKFEEVELQGMAVSTEGFVAIMTSKEST-----------RALRLVVTPDDPMSGGLDVEQAETSEARTLLQLMQGIDVARHLPHDALGNLMDLSMRTGVQLSTVYVSHISP------------FSATLMAKVPQRDGETAAA 296
            G  GAG      +    E   +V +QG++ S  GFV ++  KE             +AL++VVTP DPMS GLDV  AET EA TLLQL+Q IDV  +L HDAL +L+ +     V L  V +  +S             F A L  +V   +G +++A
Sbjct:  524 GPTGAGSAAAGPVSQAEETLVDVVVQGVSTSARGFVVVLAEKEGEGQEGSEGGSPRKALKVVVTPSDPMSAGLDVHAAETPEAITLLQLLQDIDVGSYLKHDALSSLVGVRAGHPVSLKRVVIEQLSAGRGAGGNNSNKRFKARLEVEVGDMEGASSSA 682          
BLAST of mRNA_Ecto-sp13_S_contig17592.5308.1 vs. uniprot
Match: A0A482SPV4_9ARCH (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPV4_9ARCH)

HSP 1 Score: 72.0 bits (175), Expect = 1.200e-9
Identity = 47/121 (38.84%), Postives = 68/121 (56.20%), Query Frame = 0
Query:  181 EEVELQGMAVSTEGFVAIMTSKESTRALRLVVTPDDPMSGGLDVEQAETSEARTLLQLMQGIDVARHLPHDALGNLMDLSMRTGVQLSTVYVSHISP----FSATLMAKVPQRDGETAAAE 297
            EE ++ GM+VS +GF   +      R +++ VTP DPM  GLD +QAE+SEA TLLQL+QGIDV   LP  AL +  +   +   +L  V V  +      F A L+A+  ++D    A +
Sbjct:  451 EETQVFGMSVSDQGFCVFLQGLICDRFVKVQVTPSDPMVYGLDRDQAESSEAVTLLQLLQGIDVESFLPKGALSSRFN-DGKLKYKLMRVVVDDLQDNGAGFRAKLIAQARKQDNSQEALD 570          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17592.5308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KID0_9PHAE7.950e-22892.42Beta_elim_lyase domain-containing protein n=2 Tax=... [more]
K8Z7D4_NANGC3.210e-1438.41Threonine aldolase n=1 Tax=Nannochloropsis gaditan... [more]
A0A4D9CZ25_9STRA5.350e-1436.48Beta_elim_lyase domain-containing protein n=3 Tax=... [more]
A0A482SPV4_9ARCH1.200e-938.84Aminotransferase class I/II-fold pyridoxal phospha... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17592contigEcto-sp13_S_contig17592:87..2845 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17592.5308.1mRNA_Ecto-sp13_S_contig17592.5308.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17592 87..2845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17592.5308.1 ID=prot_Ecto-sp13_S_contig17592.5308.1|Name=mRNA_Ecto-sp13_S_contig17592.5308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=482bp
QVSGPDIQRTVSMMKEVLEEAGLNPLGVSRTPRYNAEDELEWHSPDDVEA
AAAAAAAAAAAADPTASPDQLGGTANGIVDGDEVVIVSEISNAVSGDAGP
DSRGFPDSSFADAKTVVSPEMGSDGAATAELSTSAAAGAEGATGVSAEAG
LEAGGGADGLGEEGAGEKDKDELPPFVEKFEEVELQGMAVSTEGFVAIMT
SKESTRALRLVVTPDDPMSGGLDVEQAETSEARTLLQLMQGIDVARHLPH
DALGNLMDLSMRTGVQLSTVYVSHISPFSATLMAKVPQRDGETAAAESAA
AAAQQLPSLPEDAAAAGTNADDAWFDGGAAATAAAAAAPPAPPTSADDGG
GVPETPVSPSVPGTTMGSGFGRPRLGLSKIAETTNAFEALGLALRYPSSR
IFVRAELLAPTAEGGEAMGRKDSSSASSFESGDLAELYPNLMKLTDAKER
RSASERMDSQFEMQKIRQQLESAVRVVVRCS*
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