prot_Ecto-sp13_S_contig1759.5306.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1759.5306.1
Unique Name	prot_Ecto-sp13_S_contig1759.5306.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	539

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1759.5306.1 vs. uniprot
Match: A0A6H5L6Q5_9PHAE (SREBP regulating gene protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q5_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 1.240e-178
Identity = 430/550 (78.18%), Postives = 438/550 (79.64%), Query Frame = 0

Query:    1 MDATPRFRLFDNRRGS-NQMDEEAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAACGAGVLASARLLARASLSYSSWPSSSSLPGYLHSSGAGXXXXXXXXXXXXXXXXXXXXXX--RRPAVSLGPDAIPSVLLVGRGPSGLPSGQALPGGARKASSLVDATGAVLGXXXXXETRRGGV-RENSSDPYRCRNTVQGATLVADSEGRVCHRAELVVEGDDDDNVRHRPGCCAPRPPALPLLPLRGXXXXXXXXXXXXXXXXXX-KHKHPPAAPRSVSMTTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGV-------PPEEALSTPFSCWSCDVGEDGLSGNXXXXXXXXXXXXXXISYEFCVSCCQNPQRGKEREAIQASAALSGHPAYRHLLGPGNNDAANKRGPPXXXXXXXXXXXXEAGVGKSQQEEAEERGARELAFTHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPAASAAAAALPGGWGRVVEGGESRGAPPLQLDPLLLELADP 538
            MDATPRFRLFDNRRGS NQMDEEAGQ       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAACGAGVLASARLLARASLSYSSWPSSSSLPGYLHSSGAG   XXXXXXXXXXXXXXXXXXX  RRPAVSLGPDAIPSVLLV RGPSGLPSG ALPGGARKASSLVD TGAVLG        RGG  RENSS+PYRCRNTVQGATLVADSEGRVCHRAEL+VE  DD  VRHRPG                XXXXXXXXXXXXXXXXXX KHKHPPAAP S   TTR                        XXXX         PPEEALSTPFSCWSCDVGEDG SGNXXXXXXXXXXXXXX SYEFCVSCCQNPQRGKEREAIQASAALSGHPAYR LLGPGNNDA+N+R  P            EAGV KSQ EEAEER ARE+AF HCAFRCRTYSGSV HENSYRSPLKHCFGRFRPPAASAAAAALPGG   VVEG ESRGAPP Q+DPLL +LA+P
Sbjct:    1 MDATPRFRLFDNRRGSSNQMDEEAGQATATLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAACGAGVLASARLLARASLSYSSWPSSSSLPGYLHSSGAGSTDXXXXXXXXXXXXXXXXXXXXXRRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDVTGAVLGDGGGGGEIRGGEGRENSSNPYRCRNTVQGATLVADSEGRVCHRAELIVEEGDDXXVRHRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKHKHPPAAPHSGPATTRTETRRGVEGGVSVELVELGELAHGXXXXXXXXXXXXFPPEEALSTPFSCWSCDVGEDGPSGNXXXXXXXXXXXXXXSSYEFCVSCCQNPQRGKEREAIQASAALSGHPAYRDLLGPGNNDASNRRELPPPRQLQASHAAAEAGVEKSQ-EEAEERDAREMAFAHCAFRCRTYSGSVVHENSYRSPLKHCFGRFRPPAASAAAAALPGGRAGVVEGRESRGAPPHQVDPLLFDLAEP 549

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1759.5306.1 vs. uniprot
Match: D7FXG4_ECTSI (SREBP regulating gene protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG4_ECTSI)

HSP 1 Score: 452 bits (1163), Expect = 7.990e-151
Identity = 428/552 (77.54%), Postives = 435/552 (78.80%), Query Frame = 0

Query:    1 MDATPRFRLFDNRRGS--NQMDEEAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAA---CGAGVLASARLLARASLSYSSWPSSSSLPGYLHSSGAGXXXXXXXXXXXXXXXXXXXXXXRRPAVSLGPDAIPSVLLVGRGPSGLPSGQALPGGARKASSLVDATGAVLGXXXXXETRRGGVRENSSDPYRCRNTVQGATLVADSEGRVCHRAELVVEGDDDDNVRHRPGCCAPRPPALPLLPLRGXXXXXXXXXXXXXXXXXXKHKHPPAAPRSVSMTTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPP-------EEALSTPFSCWSCDVGEDGLSGNXXXXXXXXXXXXXXISYEFCVSCCQNPQRGKEREAIQASAALSGHPAYRHLLGPGNNDAANKRGPPXXXXXXXXXXXXEAG-VGKS-QQEEAEERGARELAFTHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPAASAAAAALPGGWGRVVEGGESRGAPPLQLDPLLLELADP 538
            MDATPRFRLFDNRRGS  NQMDEEAG+        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      CGAGVLASARLLARAS S+SSWPSSSS PGYLHSSGAGXXXXXXXXXXXXXXXXXXXXX RRPAVSLGPDAIPSVLLV RGPSGLPSG ALPGGARKASSLVD  GAV G     ETR G  RENSS+PYRCRNTVQGATLVADSEGRVCHRAELVVE  D                         XXXXXXXXXXXXXXXXXX                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX           EEALSTPFSCWSCDVGEDG SG+               SYEFCVSCCQNPQRG+EREAIQASAALSGHPAYR LLG GNNDAAN R P XXXXXXXXXXXXEAG V K+ QQ EAEER ARELAF HCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPAASAAAAALPGGWG VVEGGESRGAPPLQLDPLL  LA+P
Sbjct:    1 MDATPRFRLFDNRRGSSINQMDEEAGRQTATTLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGAGVLASARLLARASSSHSSWPSSSSAPGYLHSSGAGXXXXXXXXXXXXXXXXXXXXX-RRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDPAGAVPGGGGG-ETRGGRGRENSSNPYRCRNTVQGATLVADSEGRVCHRAELVVEEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEALSTPFSCWSCDVGEDGPSGSNGGGNDSPSFSSCCSSYEFCVSCCQNPQRGEEREAIQASAALSGHPAYRDLLGSGNNDAANGREPXXXXXXXXXXXXXEAGGVEKNGQQVEAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPAASAAAAALPGGWGGVVEGGESRGAPPLQLDPLLFALAEP 550

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1759.5306.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1759.5306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L6Q5_9PHAE	1.240e-178	78.18	SREBP regulating gene protein n=1 Tax=Ectocarpus s...	[more]
D7FXG4_ECTSI	7.990e-151	77.54	SREBP regulating gene protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019352	Uncharacterised protein family UPF0454	PFAM	PF10218	DUF2054	coord: 346..403 e-value: 4.3E-7 score: 30.1 coord: 451..492 e-value: 5.3E-7 score: 29.8
IPR019352	Uncharacterised protein family UPF0454	PANTHER	PTHR13481	UNCHARACTERIZED	coord: 211..405 coord: 456..493
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 102..538
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..78
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 79..101
None	No IPR available	TMHMM	TMhelix		coord: 79..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1759	contig	Ecto-sp13_S_contig1759:5297..6913 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1759.5306.1	mRNA_Ecto-sp13_S_contig1759.5306.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1759 5191..7850 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1759.5306.1 ID=prot_Ecto-sp13_S_contig1759.5306.1|Name=mRNA_Ecto-sp13_S_contig1759.5306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=539bp
MDATPRFRLFDNRRGSNQMDEEAGQTTTTLPRRRMLTSSVAVARQRRRNR
RRPGARRGLAALVPRLLASSISRARRRRALLLLLVLAACGAGVLASARLL
ARASLSYSSWPSSSSLPGYLHSSGAGSADRDDDDNDDDDNDAAHRHKHRR
PAVSLGPDAIPSVLLVGRGPSGLPSGQALPGGARKASSLVDATGAVLGGG
GGGETRRGGVRENSSDPYRCRNTVQGATLVADSEGRVCHRAELVVEGDDD
DNVRHRPGCCAPRPPALPLLPLRGGGGGSGDLASSSPPAADDKHKHPPAA
PRSVSMTTRTETRRRGEGGAGVELVALANGGGGGGAGGVPPEEALSTPFS
CWSCDVGEDGLSGNNGGGNGSSSSSSCCISYEFCVSCCQNPQRGKEREAI
QASAALSGHPAYRHLLGPGNNDAANKRGPPPPRQLRASAAAAEAGVGKSQ
QEEAEERGARELAFTHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPAA
SAAAAALPGGWGRVVEGGESRGAPPLQLDPLLLELADP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019352	UPF0454