prot_Ecto-sp13_S_contig1758.5301.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1758.5301.1
Unique Nameprot_Ecto-sp13_S_contig1758.5301.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length121
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1758.5301.1 vs. uniprot
Match: D7G5P4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P4_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 3.690e-64
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 
Query:    1 MPGNKKKNKGANKAKNAPARSNAANKDDLAGLDEILSNPEQMAEAQREAVEASGFKPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSXXXXXXXXXXXXEFKSEINQYMETLKNNS 121
            MPGNKKKNKGANKAKNAPARSNAANKDDLAGLDEILSNPEQMAEAQREAVEASGFKPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSXXXXXXXXXXXXEFKSEINQYMETLKNNS
Sbjct:    1 MPGNKKKNKGANKAKNAPARSNAANKDDLAGLDEILSNPEQMAEAQREAVEASGFKPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSXXXXXXXXXXXXEFKSEINQYMETLKNNS 121
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BLAST of mRNA_Ecto-sp13_S_contig1758.5301.1 vs. uniprot
Match: A0A835YIF9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIF9_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.990e-15
Identity = 40/79 (50.63%), Postives = 61/79 (77.22%), Query Frame = 0 
Query:   14 AKNAPARSNAANKDDLAGLDEILSNPEQMAEAQREAVEASGFKPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPS 92
            +K+   +SNAANK+DL GLDE+L++P  M + + + V  +  K ++G +NA+IG++GF+QAT+NPAMF +AMSML DP+
Sbjct:   11 SKSPTRKSNAANKEDLDGLDELLADPALMKQFEDKTVPPA--KKKTGAENARIGMEGFSQATKNPAMFAEAMSMLSDPN 87
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BLAST of mRNA_Ecto-sp13_S_contig1758.5301.1 vs. uniprot
Match: A0A835ZF98_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF98_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 4.190e-5
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0 
Query:   56 KPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSXXXXXXXXXXXXEFKSEINQYMETLK 118
            KP SG +NA+IG++GF  AT NP MF +AMSML DP+   XXXXXXXXX     I ++M +LK
Sbjct:  544 KPVSGAENARIGMEGFKAATGNPQMFAEAMSMLSDPNAVKXXXXXXXXXXXXXXIQKHMASLK 606
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1758.5301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5P4_ECTSI3.690e-64100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YIF9_9STRA1.990e-1550.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZF98_9STRA4.190e-557.14EGF-like domain-containing protein n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1758contigEcto-sp13_S_contig1758:12424..15847 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1758.5301.1mRNA_Ecto-sp13_S_contig1758.5301.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1758 12424..15847 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1758.5301.1 ID=prot_Ecto-sp13_S_contig1758.5301.1|Name=mRNA_Ecto-sp13_S_contig1758.5301.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=121bp
MPGNKKKNKGANKAKNAPARSNAANKDDLAGLDEILSNPEQMAEAQREAV
EASGFKPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSAVKEAEAM
MNDPEFKSEINQYMETLKNNS
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