prot_Ecto-sp13_S_contig10569.530.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10569.530.1
Unique Nameprot_Ecto-sp13_S_contig10569.530.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length244
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10569.530.1 vs. uniprot
Match: D7G2I3_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I3_ECTSI)

HSP 1 Score: 418 bits (1074), Expect = 1.240e-146
Identity = 226/244 (92.62%), Postives = 227/244 (93.03%), Query Frame = 0 
Query:    1 MSLHRSSGRVGDGQSGKSGGGGSSVVVGKDSSRHLWGIPNVVYTFTHGFMMEMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHELFKNQTIDKSQKQKAGTLSVMKYKVTMSQASLCPFAATNARESTRRRKNSVTSRAMQRVKRPVQQKWTEALDWKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFKDSAFRVETNKWKKGDEVVDGTERRTFTFLAESKDDKELWLYQIR 244
            MSLHRSS  VGD +SGK       VVVGKDSSRHLWGIPNVVYTFTHGFMMEMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHE FKNQTIDKSQKQKAGTLSVMKYKVTMSQA      ATNARESTRRRKNSVTSRAMQRVKRPVQQKWTEALDWKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFKDSAFRVETNKWKKGDEVVDGTERRTFTFLAESKDDKELWLYQIR
Sbjct:    1 MSLHRSSATVGDDKSGKGXXXXXXVVVGKDSSRHLWGIPNVVYTFTHGFMMEMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHEQFKNQTIDKSQKQKAGTLSVMKYKVTMSQA------ATNARESTRRRKNSVTSRAMQRVKRPVQQKWTEALDWKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFKDSAFRVETNKWKKGDEVVDGTERRTFTFLAESKDDKELWLYQIR 238
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BLAST of mRNA_Ecto-sp13_S_contig10569.530.1 vs. uniprot
Match: A0A6H5JJ45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ45_9PHAE)

HSP 1 Score: 405 bits (1040), Expect = 2.200e-134
Identity = 216/244 (88.52%), Postives = 227/244 (93.03%), Query Frame = 0 
Query:    1 MSLHRSSGRVGDGQSGKSGGGGSSVVVGKDSSRHLWGIPNVVYTFTHGFMMEMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHELFKNQTIDKSQKQKAGTLSVMKYKVTMSQASLCPFAATNARESTRRRKNSVTSRAMQRVKRPVQQKWTEALDWKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFKDSAFRVETNKWKKGDEVVDGTERRTFTFLAESKDDKELWLYQIR 244
            MSL RSSGRVGDG+SGK G   SSVVVGKDSSRHLWGIPNVVYTFTHGFM EMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHE FKN+TIDKS K K GTLSVMK+KVTMSQA      ATNARESTRRRKNSVTSRAM++VKRPVQQKWTEA+DWKKRSC+LTGESLSLFSDPKDTEPSQIVYL GATAEPELGQAFK+SAFRVETNKWKKGD++VDGTERRTFTFLAESKDD+ELWLYQIR
Sbjct:  303 MSLDRSSGRVGDGKSGKGGXXXSSVVVGKDSSRHLWGIPNVVYTFTHGFMREMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHEEFKNETIDKSHKHKEGTLSVMKHKVTMSQA------ATNARESTRRRKNSVTSRAMRKVKRPVQQKWTEAVDWKKRSCILTGESLSLFSDPKDTEPSQIVYLTGATAEPELGQAFKESAFRVETNKWKKGDDLVDGTERRTFTFLAESKDDRELWLYQIR 540
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10569.530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2I3_ECTSI1.240e-14692.62PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JJ45_9PHAE2.200e-13488.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 156..244
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 152..244
e-value: 1.2E-10
score: 41.8
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 145..244
score: 9.102
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 120..244
e-value: 3.8E-12
score: 47.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10569contigEcto-sp13_S_contig10569:2282..4659 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10569.530.1mRNA_Ecto-sp13_S_contig10569.530.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10569 2282..4659 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10569.530.1 ID=prot_Ecto-sp13_S_contig10569.530.1|Name=mRNA_Ecto-sp13_S_contig10569.530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp
MSLHRSSGRVGDGQSGKSGGGGSSVVVGKDSSRHLWGIPNVVYTFTHGFM
MEMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHELFKNQTIDKSQKQKAG
TLSVMKYKVTMSQASLCPFAATNARESTRRRKNSVTSRAMQRVKRPVQQK
WTEALDWKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFK
DSAFRVETNKWKKGDEVVDGTERRTFTFLAESKDDKELWLYQIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf