prot_Ecto-sp13_S_contig17558.5288.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17558.5288.1
Unique Nameprot_Ecto-sp13_S_contig17558.5288.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length168
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17558.5288.1 vs. uniprot
Match: D8LMQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ8_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 1.360e-108
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0 
Query:    2 MSLVGLLVGFVLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTKNARGDLTRLLGMRTVAFLGLVSE 168
            MSLVGLLVG VLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTKNARGDLTRLLGMRTVAFLGLVSE
Sbjct:   13 MSLVGLLVGLVLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTKNARGDLTRLLGMRTVAFLGLVSE 179
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BLAST of mRNA_Ecto-sp13_S_contig17558.5288.1 vs. uniprot
Match: A0A6H5K822_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K822_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 7.090e-104
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0 
Query:    2 MSLVGLLVGFVLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTKNARGDLTRLLGMRTVAFLGLVSE 168
            MSLVGLLVG VLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLAT KNARGDLTRLLGMRTVAFLGLVSE
Sbjct:  231 MSLVGLLVGLVLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATMKNARGDLTRLLGMRTVAFLGLVSE 397
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BLAST of mRNA_Ecto-sp13_S_contig17558.5288.1 vs. uniprot
Match: A0A835Z6C8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C8_9STRA)

HSP 1 Score: 121 bits (303), Expect = 9.340e-29
Identity = 76/166 (45.78%), Postives = 97/166 (58.43%), Query Frame = 0 
Query:    2 MSLVGLLVGFVLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTKNARGDLTRLLGMRTVAFLGLVS 167
            M+L GL +G +LS+ARGAFGDL RALGL + L V RS  + ++YP LP  + A+ M PRRPFPP            I E      P+  G    EFS  K+LL++AF+GG AGY  S+ P   LP  + AL   G  AY  T + + GDL RL GMR  A LG+V+
Sbjct:  177 MALAGLFLGLMLSIARGAFGDLLRALGLGAYLTVVRSASIGSKYPILPQLKAAMHMGPRRPFPPVP----------IGESLSRYRPVPGGP---EFSTMKALLAMAFMGGMAGYFGSK-PVPLLPEVLGALATAGCAAYATTLRTSAGDLARLGGMRFAALLGVVT 328
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17558.5288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMQ8_ECTSI1.360e-10899.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K822_9PHAE7.090e-10498.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6C8_9STRA9.340e-2945.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..121
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..168
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.756
NoneNo IPR availableTMHMMTMhelixcoord: 120..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17558contigEcto-sp13_S_contig17558:2..3539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17558.5288.1mRNA_Ecto-sp13_S_contig17558.5288.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17558 2..3563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17558.5288.1 ID=prot_Ecto-sp13_S_contig17558.5288.1|Name=mRNA_Ecto-sp13_S_contig17558.5288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp
MMSLVGLLVGFVLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPY
ARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMA
KSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTKNARGD
LTRLLGMRTVAFLGLVSE
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