mRNA_Ecto-sp13_S_contig17550.5286.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17550.5286.1 vs. uniprot
Match: D8LED3_ECTSI (WSC domain protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LED3_ECTSI) HSP 1 Score: 712 bits (1837), Expect = 1.120e-250 Identity = 443/524 (84.54%), Postives = 455/524 (86.83%), Query Frame = 1
Query: 1 TPQCHAEDLTSRENCGFLFWSDVTAHGYGENLYLCYGAADCMMYDGVLDTMYDYAVNDGPVTEYDIRARRMLWASTTRLGCAISSCVYEYIDVEVLVCNYDPIGDYGDPAAIEEEVGLPEQSEEECQQVAPPDTPSPGTTPAPATXXXXXSTGEEPIPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVKPEPELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGACDPNPCMNEGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWTDERKGVFQSAANRWSEVLTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCLGISYSGEMTFDIDDIAELERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTGTSCGHFSESTFEDELMTGFVNA 1572
T + HAE+LTSR+NCG+LFWSDVTAHGYGENLYLCYGAADCMMYDGVLDTMYDYAV+DGPVTEYDIRARRMLWASTT+LGCAISSCVY+YIDVEVLVCNYDPIGDYGDPAAIE EVGLPEQSEEECQQVAPPDTPSPGTTPAPA XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX APVKPE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VGAC+PNPCMN GSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTW+DERKGVFQ AANRWSE+LTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTY+DC GISYSGEMTFDIDDIAE+ERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTGTSCGHFSESTFEDELMTGFVNA
Sbjct: 143 TARDHAEELTSRQNCGYLFWSDVTAHGYGENLYLCYGAADCMMYDGVLDTMYDYAVDDGPVTEYDIRARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDPIGDYGDPAAIEVEVGLPEQSEEECQQVAPPDTPSPGTTPAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRAPVTPEPTPAPVKPE--------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGVGACNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTGTSCGHFSESTFEDELMTGFVNA 628
BLAST of mRNA_Ecto-sp13_S_contig17550.5286.1 vs. uniprot
Match: D8LED1_ECTSI (PR1-like metalloprotease n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED1_ECTSI) HSP 1 Score: 711 bits (1836), Expect = 2.500e-250 Identity = 475/524 (90.65%), Postives = 488/524 (93.13%), Query Frame = 1
Query: 1 TPQCHAEDLTSRENCGFLFWSDVTAHGYGENLYLCYGAADCMMYDGVLDTMYDYAVNDGPVTEYDIRARRMLWASTTRLGCAISSCVYEYIDVEVLVCNYDPIGDYGDPAAIEEEVGLPEQSEEECQQVAPPDTPSPGTTPAPATXXXXXSTGEEPIPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVKPEPELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGACDPNPCMNEGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWTDERKGVFQSAANRWSEVLTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCLGISYSGEMTFDIDDIAELERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTGTSCGHFSESTFEDELMTGFVNA 1572
T + HAE+LTSR+NCG+LFWSDVTAHGYGENLYLCYGAADCMMYDGVLDTMYDYAV+DGPVTEYDIRARRMLWASTT+LGCAISSCVY+YIDVEVLVCNYDPIGDYGDPAAIE EVGLPEQSEEECQQVAPPDTPSPGTTPAPA XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX APVKPE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VGAC+PNPCMN GSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTW+DERKGVFQ AANRWSE+LTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTY+DC GISYSGEMTFDIDDIAE+ERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADI+ELEGGTGTSCGHFSESTFEDELMTGFVNA
Sbjct: 123 TARGHAEELTSRQNCGYLFWSDVTAHGYGENLYLCYGAADCMMYDGVLDTMYDYAVDDGPVTEYDIRARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDPIGDYGDPAAIEVEVGLPEQSEEECQQVAPPDTPSPGTTPAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRAPVTPEPTPAPVKPE-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGVGACNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIVELEGGTGTSCGHFSESTFEDELMTGFVNA 641
BLAST of mRNA_Ecto-sp13_S_contig17550.5286.1 vs. uniprot
Match: D7G7J6_ECTSI (Putative zinc metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J6_ECTSI) HSP 1 Score: 663 bits (1710), Expect = 8.080e-231 Identity = 395/502 (78.69%), Postives = 408/502 (81.27%), Query Frame = 1
Query: 1 TPQCHAEDLTSRENCGFLFWSDVTAHGYGENLYLCYGAADCMMYDGVLDTMYDYAVNDGPVTEYDIRARRMLWASTTRLGCAISSCVYEYIDVEVLVCNYDPIGDYGDPAAIEEEVGLPEQSEEECQQVAPPDTPSPGTTPAPATXXXXXSTGEEPIPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVKPEPELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGACDPNPCMNEGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWTDERKGVFQSAANRWSEVLTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCLGISYSGEMTFDIDDIAELERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTG 1506
T + HAE+LTSR+NCG+LFWSDVTAHGYGENLYLCYGAADCMMYDGVLDTMYDYAV+DGPVTEYDIRARRMLWASTT+LGCAISSCVY+YIDVEVLVCNYDPIGDYGDPAAIE EVGLPEQSEEECQQVAPPDTPSPGTTPAPA XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX APV PEP XXXXXXXXXXXXXXXXXX VGAC+PNPCMN GSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTW+DERKGVFQ AANRWSE+LTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTY+DC GISYSGEMTFDIDDIAE+ERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADI+ELEGGTG
Sbjct: 275 TARGHAEELTSRQNCGYLFWSDVTAHGYGENLYLCYGAADCMMYDGVLDTMYDYAVDDGPVTEYDIRARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDPIGDYGDPAAIEVEVGLPEQSEEECQQVAPPDTPSPGTTPAPAAXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXSTRAPVTPEPT---------------------------------------------------------PXXXXXXXXXXXXXXXXXXVTDESPGVGACNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIVELEGGTG 710
BLAST of mRNA_Ecto-sp13_S_contig17550.5286.1 vs. uniprot
Match: D8LED2_ECTSI (Ig-like protein, group 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED2_ECTSI) HSP 1 Score: 490 bits (1262), Expect = 1.240e-167 Identity = 313/421 (74.35%), Postives = 317/421 (75.30%), Query Frame = 1
Query: 310 GDYGDPAAIEEEVGLPEQSEEECQQVAPPDTPSPGTTPAPATXXXXXSTGEEPIPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVKPEPELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGACDPNPCMNEGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWTDERKGVFQSAANRWSEVLTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCLGISYSGEMTFDIDDIAELERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTGTSCGHFSESTFEDELMTGFVNA 1572
GDYGDPAAIEEEVGLPEQSEEECQQVAPPD PSPGTTPAPAT XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PV PE XX XXXXXX VGACDPNPCMN GSCEVDPNGGYTCSCGSSYG MMCETDVTGMSEFFITVDFLG+WTDERKGVFQSAANRWSEVLT IPCSGTNGN GAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDC GISYSGEMTFDIDDIAE+ERQGTFEGVILHEMGHVIGTGTLWGECSDCDST SAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTGTSCGHFSESTF+DELMTG+V A
Sbjct: 3 GDYGDPAAIEEEVGLPEQSEEECQQVAPPDMPSPGTTPAPATTXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVNPE------------------------------------------------------------STPAXXAPQXXXXXXPAPVTDESPGVGACDPNPCMNGGSCEVDPNGGYTCSCGSSYGAMMCETDVTGMSEFFITVDFLGSWTDERKGVFQSAANRWSEVLTRIPCSGTNGNRGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTSSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTGTSCGHFSESTFKDELMTGYVKA 354
BLAST of mRNA_Ecto-sp13_S_contig17550.5286.1 vs. uniprot
Match: D8LJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJN8_ECTSI) HSP 1 Score: 208 bits (530), Expect = 5.580e-57 Identity = 98/164 (59.76%), Postives = 117/164 (71.34%), Query Frame = 1
Query: 883 GACDPNPCMNEGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWTDE----RKGVFQSAANRWSEVLTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCLGISYSGEMTFDIDDIAELERQGTFEGVILHEMGHVIGTG 1362
G C+PNPC+NEGSCEVDPNGGY+CSC SSYGGM CETD TG+ EFFIT++F GTW RK +FQ+AA RW +V+THIPC+GT+ G A GEL I+ T IDG G GP Y DC G+SY G M FD DDI +LE G EG+++HE+GHVIG G
Sbjct: 381 GECNPNPCLNEGSCEVDPNGGYSCSCSSSYGGMNCETDTTGLPEFFITLEFDGTWDGALDATRKDIFQTAAKRWEKVVTHIPCTGTHPEG-ATGELIISVTQHEIDGSGGQFALGGPSDVYGDCPGVSYMGVMIFDSDDIDDLEDDGILEGLVVHEIGHVIGVG 543
BLAST of mRNA_Ecto-sp13_S_contig17550.5286.1 vs. uniprot
Match: A0A1X4N965_9RHOB (Uncharacterized protein n=1 Tax=Marivita geojedonensis TaxID=1123756 RepID=A0A1X4N965_9RHOB) HSP 1 Score: 129 bits (324), Expect = 8.820e-30 Identity = 79/200 (39.50%), Postives = 109/200 (54.50%), Query Frame = 1
Query: 1012 EFFITVDFLGTWTDERKGVFQSAANRWSEVL-THIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCLGISYSGEMTFDIDDIAELERQGTFEGVILHEMGHVIGTGTLWG-----ECSDCDSTGSAEWKCPLAAQVYND------FMGNPAGSRADIIELEGGTGTSCGHFSESTFEDELMTGFVNAV 1575
++ I V F+G W+ E K VF +AA+ + ++ T +P +GNG +L IT+ L+ IDGV G LG AGP G SD G+ GEMTFD D + + G F+ ++LHEM HV+G GTLW D G+ + A VY F G P ++E +GG GT+ GH+ E T+ DELMTGF+ V
Sbjct: 88 QYNIEVQFVGEWSLELKAVFVAAADYLASLIATDLP-DAIDGNGTLYDDLVITADLDAIDGVGGVLGQAGPTGLRSD-TGLPAVGEMTFDEADAVQYYQAGLFDDIVLHEMIHVMGFGTLWDYNNLVSTEVIDDNGTRRPNDDIIASVYTGDAANTAFNGAPTTDDLILVETDGGAGTAGGHWDEETYFDELMTGFIGYV 285
BLAST of mRNA_Ecto-sp13_S_contig17550.5286.1 vs. uniprot
Match: A0A4P5WZA4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetia bacterium TaxID=2052181 RepID=A0A4P5WZA4_9BACT) HSP 1 Score: 129 bits (323), Expect = 4.450e-28 Identity = 76/196 (38.78%), Postives = 105/196 (53.57%), Query Frame = 1
Query: 988 ETDVTGMSEFFITVDFLGTWTDERKGVFQSAANRWSEVLTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCLGISYSGEMTFDIDDIAELERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAE--WKCPLAAQVYNDFMGNPAGSRADIIELEGGTGTSCGHFSESTFEDELMTGFVN 1569
E D G + +TV ++G +T ++ F +AA RWS+V+T T G ++ I +++ PIDG G LG AGP + G+ Y+G M FD D+A +E GTF GVI+HEMGHV+G GTLW S G A + A + YN G S +E GG GT H+ EST + ELMTG+ +
Sbjct: 260 EADTPG---YQVTVVYVGAFTAAQRSAFDAAAARWSQVITGDLPGVTLPGGTFVDDVQIEASIVPIDGANGILGQAGPTDFRTGVAGLPYAGVMEFDTADVAAMESDGTFRGVIMHEMGHVLGLGTLWPSLSLVSGAGGANPVYVGANAVREYNAIFGVTGTSVP--VENTGGPGTRDSHWRESTMQTELMTGYAS 450
BLAST of mRNA_Ecto-sp13_S_contig17550.5286.1 vs. uniprot
Match: UPI001F3F5515 (hypothetical protein n=1 Tax=Sinirhodobacter sp. WL0062 TaxID=2907145 RepID=UPI001F3F5515) HSP 1 Score: 124 bits (311), Expect = 5.760e-28 Identity = 70/192 (36.46%), Postives = 106/192 (55.21%), Query Frame = 1
Query: 1012 EFFITVDFLGTWTDERKGVFQSAANRWSEVLTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCLGISYSGEMTFDIDDIAELERQGTFEGVILHEMGHVIGTGTLWG-----ECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADI--IELEGGTGTSCGHFSESTFEDELMTGFV 1566
++ I + F+G W+DE K VF ++A+ + ++ +G+G +L IT+ L+ IDGV G LG AGP G SD G+ GEMTFD D + G F+ ++LHEM HV+G GTLW D + + + VY N A + + +E +GG+GT+ GH+ E T++DELMTG++
Sbjct: 95 QYNIEIRFVGEWSDELKAVFIASADYLASLIAEDIPDAIDGSGNLYDDLVITADLDAIDGVGGILGQAGPTGIRSD-TGLPAVGEMTFDQADAVKYYNLGLFDDIVLHEMMHVMGVGTLWDYNNLVTTQVIDDNNTKKPTDDIVTSVYTGAAANLAYTEDTLLFVETDGGSGTAGGHWDEDTYKDELMTGYI 285
BLAST of mRNA_Ecto-sp13_S_contig17550.5286.1 vs. uniprot
Match: UPI00148037CA (hypothetical protein n=1 Tax=Ruegeria sp. HKCCA6837 TaxID=2682989 RepID=UPI00148037CA) HSP 1 Score: 122 bits (307), Expect = 1.840e-27 Identity = 78/216 (36.11%), Postives = 113/216 (52.31%), Query Frame = 1
Query: 988 ETDVTGMSE-------FFITVDFLGTWTDERKGVFQSAANRWSEVLTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCLGISYSGEMTFDIDDIAELERQGTFEGVILHEMGHVIGTGTLWGECS------DCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADI----------IELEGGTGTSCGHFSESTFEDELMTGFV 1566
+T +TG ++ + I V F+G W D K VF ++A+ + ++ +GNG +L IT+ L+ IDGV G LG AGP G SD G+ GEMTFD D G F+ ++LHEM HV+G GTLW D ++T K P V + + G+ A S ++ +E +GGTGT+ GH+ E T+ DELMTG++
Sbjct: 71 DTYITGQNDGIDDSLQYNIEVQFVGDWPDHLKAVFIASADYLASLIAEDLEDAVDGNGNVYDDLVITADLDAIDGVGGVLGQAGPTGLRSD-TGLPAVGEMTFDEADAQAYYDAGQFDDIVLHEMMHVMGVGTLWDYYGLVTTVVDDNNT-----KRPNDDTVTSLYTGDAANSEFNVNYLAEDDFLLVETDGGTGTAGGHWDEETYYDELMTGYI 280
BLAST of mRNA_Ecto-sp13_S_contig17550.5286.1 vs. uniprot
Match: UPI001EE85A3B (hypothetical protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE85A3B) HSP 1 Score: 127 bits (320), Expect = 3.330e-27 Identity = 83/199 (41.71%), Postives = 106/199 (53.27%), Query Frame = 1
Query: 997 VTGMSEFFITVDFLGTWTDERKGVFQSAANRWSEVLTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRG--TYSDCLGISYSGEMTFDIDDIAELERQGTFEGVILHEMGHVIGTGTLWGEC------SDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTGTSCGHFSESTFEDELMTGFVN 1569
V +S+F I V FLG + ++ +FQSAANRW+E++ G + G ++ IT+ IDGV G LG AGP T SD + Y G M FD D+A LE G E VILHEMGHV+G GT+W S D T + LA YN G +E GG GT+ GH+ ES F+ ELMTGF+N
Sbjct: 1063 VNPISQFNIEVVFLGGLSASQQAIFQSAANRWAEIIV-----GDLPDVGLIDDVQITAEGVAIDGVSGILGQAGPTALRTGSD---LPYQGLMEFDSADLASLESSGQLEDVILHEMGHVLGIGTIWNRQGLLLNPSGGDGTTDTRFTGALATAQYNSIFG--VSDTGVPVENTGGPGTADGHWRESIFDSELMTGFLN 1251 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17550.5286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17550.5286.1 >prot_Ecto-sp13_S_contig17550.5286.1 ID=prot_Ecto-sp13_S_contig17550.5286.1|Name=mRNA_Ecto-sp13_S_contig17550.5286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=532bp TPQCHAEDLTSRENCGFLFWSDVTAHGYGENLYLCYGAADCMMYDGVLDTback to top mRNA from alignment at Ecto-sp13_S_contig17550:160..3642+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17550.5286.1 ID=mRNA_Ecto-sp13_S_contig17550.5286.1|Name=mRNA_Ecto-sp13_S_contig17550.5286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3483bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17550:160..3642+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17550:160..3642+ >mRNA_Ecto-sp13_S_contig17550.5286.1 ID=mRNA_Ecto-sp13_S_contig17550.5286.1|Name=mRNA_Ecto-sp13_S_contig17550.5286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1596bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17550:160..3642+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |