prot_Ecto-sp13_S_contig1753.5275.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1753.5275.1
Unique Nameprot_Ecto-sp13_S_contig1753.5275.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length673
Homology
BLAST of mRNA_Ecto-sp13_S_contig1753.5275.1 vs. uniprot
Match: A0A6H5KLH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH2_9PHAE)

HSP 1 Score: 615 bits (1587), Expect = 3.870e-213
Identity = 327/415 (78.80%), Postives = 346/415 (83.37%), Query Frame = 0
Query:  259 ACKEIHHQYTDQQPRVSPPEPASVESVHRREWGKPTQQQRQQIKQAIPPCGPYETHLQPAAGEAAATASTQVLPSRGFSLQDQRWLQQQEQQQRPFVVVGTVGEFGDRVLLLPATRERRQAMAAGSGASVPLTWTNSKGFKRTATLIQTKAKPKVCNPLLMLATLLAWMREFPPGVLPESNRPVLPEALFAPDQASSSAATSALQSNXXXXXXXXXXXXXXXXXXVSKDNADNSNNAFDXSSRAGNATDIHGAAGKTNEKFETELSLGAAWLLAHMIFGRGSGGQQQRVSSYAQVPHRGEIELNGGEAAALSLLPCPLIGWCPRPEVVMEALSEGGGSLRAYSISPSEFDIRVADNVGGQEASPDIPTVKDLGVEQKRQADGGGGQAQAAVDELVRVGYARKRAVLGLLTLTPKV 673
            ACKEIHHQYT +QPRVSP EPASV SV RREWGK T+QQRQQIKQA+PP   Y+ HLQPA GEAAATASTQVLPSRG SL+ QRWL+QQEQQQRPFV+VGTVGEFGDRVLLLPATRERRQAMAAGSG SVPLTWT+SKGFKRT +LIQTKAKPKVCNPLLMLATLLAWMREF PGVLPESNRPVLP+AL APDQASSSAATSALQSN                  VS            X              G+T EKFETELS GAAWLLAHM+FGRGSGGQQQRVSSYAQVPH+GEI LNGGEAAALSLL CPLIGWCPRPE VMEALSEGGGSLRAYSISPSEFD+ VAD V GQE +PDIPTVKDLGVEQ+RQADGGGG+AQAAVDELVRVGYARKRAVLGLLTLTP++
Sbjct:   51 ACKEIHHQYTHRQPRVSPREPASVVSVQRREWGKLTRQQRQQIKQALPPVVAYKLHLQPAGGEAAATASTQVLPSRGCSLEYQRWLRQQEQQQRPFVIVGTVGEFGDRVLLLPATRERRQAMAAGSGTSVPLTWTDSKGFKRTTSLIQTKAKPKVCNPLLMLATLLAWMREFSPGVLPESNRPVLPKALLAPDQASSSAATSALQSNNNGSKSNIRSNSSGNNSGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKEKFETELSPGAAWLLAHMMFGRGSGGQQQRVSSYAQVPHKGEIGLNGGEAAALSLLSCPLIGWCPRPEDVMEALSEGGGSLRAYSISPSEFDVGVADKVWGQEVTPDIPTVKDLGVEQERQADGGGGRAQAAVDELVRVGYARKRAVLGLLTLTPEM 465          
BLAST of mRNA_Ecto-sp13_S_contig1753.5275.1 vs. uniprot
Match: D7G0C7_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C7_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 6.930e-50
Identity = 111/154 (72.08%), Postives = 121/154 (78.57%), Query Frame = 0
Query:  524 SLGAAWL--LAHMIFGR--GSGGQQQRVSSYAQVPHRGEIELNGGEAAALSLLPCPLIGWCPRPEVVMEALSEGGGSLRAYSISPSEFDIRVADNVGGQEASPDIPTVKDLGVEQKRQADGGGGQAQAAVDELVRVGYARKRAVLGLLTLTPKV 673
            SL A W        F R  G GG++     + + P R +I L GGEAAALSLLPCPLIGW PRPE VMEALSEGGGSLRAYSISPSEFD  VADNV GQE +PDIP VKDLGVEQKR+A GGGG+AQAAVDELVRVGYARKRA+LGLLTLTPK+
Sbjct:  152 SLSAQWANSATEFYFYRLPGRGGRR-----WPRGPER-QIGLYGGEAAALSLLPCPLIGWSPRPEDVMEALSEGGGSLRAYSISPSEFDTGVADNVRGQEVTPDIPKVKDLGVEQKREAAGGGGRAQAAVDELVRVGYARKRAILGLLTLTPKM 299          
BLAST of mRNA_Ecto-sp13_S_contig1753.5275.1 vs. uniprot
Match: D7G0C5_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C5_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.630e-42
Identity = 162/415 (39.04%), Postives = 200/415 (48.19%), Query Frame = 0
Query:  285 VHRREWGKPTQQ---QRQQIKQAIPPC---------------------GPYETHLQPAAGEAAATASTQVLPSRGFSLQDQRWLQQQEQQQRPFVVVGTVGEFGDRVLLLPATRERRQAMAAGSGASVPLTWTNSKGFKRTATLIQTKAKPKVCNPLLMLATLLAWMREFPPGVLPESNRPVLPEALFAPDQASSSAA--TSALQSNXXXXXXXXXXXXXXXXXXVSKDNADNSNNAFDXSSRAGNATDIHGAAGKTNEKFETELSLGAAWLLAHMIFGRGSGGQQQRVSSYAQVPHRGEIELNGGEAAALSLLPCPLIGWCPRPEVVMEALSEGGGSLRAYSISPSEFDIRVADNVGGQEASPDIPTVKDLGVEQKRQADGGGGQAQAAVDELVRVGYARKRAVLGLLTLTPKV 673
            V R EWG+ TQQ   +RQQ  Q  PP                       P     Q   G +AAT S       G  L+D    Q+    Q PFV++G + +   R LLLP TRERR+ M + S ASVP+TWT+S G  RTA L +TKAKPK CNPL MLA LLAWMRE PPG LPE+   +  E L A    S S +  +S +  N XXXXXXXXXXXXXXXXX              X                        LSLGAAWLLAH++FG   GG+      + +    G++ L+G EA A+ LL CPLIGW PRP  V++A+SEG G L AYS+  + F+ +                                G    A DELV  G+ARK     +L L  K+
Sbjct:   43 VQRCEWGQTTQQVRRERQQQPQEFPPAVLALQLQEXXXXXXXQPRQEASPTLRRQQWGRGASAATHSL-----GGGCLRDD---QEAGHDQPPFVMMGMLDD--SRALLLPTTRERREVMGSLSSASVPVTWTDSTGQSRTAILTRTKAKPKPCNPLPMLANLLAWMRELPPGALPENRLRIRLETLLALQSPSKSVSRQSSTIGKNTXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXLSLGAAWLLAHLMFGMDGGGKA--TGPFEREILNGKVSLSGAEANAMPLLLCPLIGWSPRPREVIQAMSEGAGILCAYSVELAAFETQT-------------------------------GICGKAADELVHAGFARKVEFGEMLALDQKM 404          
BLAST of mRNA_Ecto-sp13_S_contig1753.5275.1 vs. uniprot
Match: A0A6H5KHC9_9PHAE (VRR-NUC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHC9_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 7.860e-24
Identity = 80/186 (43.01%), Postives = 109/186 (58.60%), Query Frame = 0
Query:  270 QQPRVSPPEPASVESVHRREWGKPTQQQRQQIKQAIPPCGPYETHLQPAAGEAAATASTQVLPSRGFSLQDQRWLQQQEQQQRPFVVVGTVGEFGDRVLLLPATRERRQAMAAGSGASVPLTWTNSKGFKRTATLIQTKAKPKVCNPLLMLATLLAWMREFPPGVLPESNRPVLPEALFAPDQASS 455
            QQ +  PP   +V ++  +EWG+   QQ+Q +++A P        L+       A+A+T  L   G  L+D    Q+    Q PFV++G + +   R L+LP TRERR+ M + S ASVP+TWT+S G  RTA L +T+A+PK CNP  MLA LLAWMRE PPG LPE+   V  E L AP   S+
Sbjct:   61 QQSQEFPPAVLAVLALQLQEWGET--QQQQPLQEASPT-------LRRRQWGRCASAATHSLG--GGCLRDD---QEAGHDQPPFVMMGMLDD--SRALMLPTTRERREVMQSLSSASVPVTWTDSTGQSRTAILTRTEARPKPCNPFPMLANLLAWMRELPPGALPENRLRVRLETLLAPQSPSN 230          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1753.5275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KLH2_9PHAE3.870e-21378.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0C7_ECTSI6.930e-5072.08Fanconi-associated nuclease n=1 Tax=Ectocarpus sil... [more]
D7G0C5_ECTSI1.630e-4239.04Fanconi-associated nuclease n=1 Tax=Ectocarpus sil... [more]
A0A6H5KHC9_9PHAE7.860e-2443.01VRR-NUC domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1753contigEcto-sp13_S_contig1753:10691..15859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1753.5275.1mRNA_Ecto-sp13_S_contig1753.5275.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1753 10691..15859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1753.5275.1 ID=prot_Ecto-sp13_S_contig1753.5275.1|Name=mRNA_Ecto-sp13_S_contig1753.5275.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=673bp
PLPAVPLILLCCCWHWPEHNLRPNSSRRARRCMDQHRQVLRSRPIAEGCW
GWGMRYGHVQAKRERVARNDERSREVFRWLSSLTAQVELEFAERTAKEIA
LGEVAQQCAREGARRKGAPGGSNKRKRRSLRALPTASTAAAVSAALSSSA
AGDQEIAASSHKELTPCLSPSRARGEVAGWTCSEDGRLSAAVANKRRCCC
GGDYVVADWTDGQARSLLSTAKLGTSLAKASSSSKGGLTDDTATTVRTTT
TTSATTFAACKEIHHQYTDQQPRVSPPEPASVESVHRREWGKPTQQQRQQ
IKQAIPPCGPYETHLQPAAGEAAATASTQVLPSRGFSLQDQRWLQQQEQQ
QRPFVVVGTVGEFGDRVLLLPATRERRQAMAAGSGASVPLTWTNSKGFKR
TATLIQTKAKPKVCNPLLMLATLLAWMREFPPGVLPESNRPVLPEALFAP
DQASSSAATSALQSNNNGSNSNSRSNSSGNSNGVSKDNADNSNNAFDNSS
RAGNATDIHGAAGKTNEKFETELSLGAAWLLAHMIFGRGSGGQQQRVSSY
AQVPHRGEIELNGGEAAALSLLPCPLIGWCPRPEVVMEALSEGGGSLRAY
SISPSEFDIRVADNVGGQEASPDIPTVKDLGVEQKRQADGGGGQAQAAVD
ELVRVGYARKRAVLGLLTLTPKV
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