prot_Ecto-sp13_S_contig1753.5274.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1753.5274.1
Unique Nameprot_Ecto-sp13_S_contig1753.5274.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length242
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1753.5274.1 vs. uniprot
Match: D7G0C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0C8_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 6.430e-147
Identity = 233/240 (97.08%), Postives = 235/240 (97.92%), Query Frame = 0 
Query:    1 MVGNSLGGMEDEIGVFCSDVSDEEMLLPCLDFTLKVLSILCGSDEILGSEAGRDVLGQCLADAFYDAGDLDESLDGSQNHPAADEAFVMCFDKLEDFASTVQQLPLAVQLVQVMEAVATARVRCLAAQPAGRGAAARGGQRRGEAPELSPHQKLSSLCLTLLQRDWSEGDLKFVYKSSTLGVLVRAHLRWAKDPLQAVEVMASEVLPLLLETGDCLGPAEGYPTLTAASFSHFYTPLLQA 240
            MVGNSLGGMEDEIGVFCSDVSDEEMLLPCLDFTLKVLSILCGSDEILGSEAGR+VLG+CLADAFYD GDLDESLDGSQN PAADEAFVMCFDKLEDFASTVQQLPLAVQLVQVMEAVATARVRCLAAQP GRGAAARGGQRRGE PELSPHQKLSSLCLTLLQRDWSEGDLKFVYKSSTLGVLVRAHLRWAKDPLQAVEVM SEVLPLLLETGDCLGPAEGYPTLTAASFSHFYTPLLQA
Sbjct:  940 MVGNSLGGMEDEIGVFCSDVSDEEMLLPCLDFTLKVLSILCGSDEILGSEAGRNVLGECLADAFYD-GDLDESLDGSQNRPAADEAFVMCFDKLEDFASTVQQLPLAVQLVQVMEAVATARVRCLAAQPDGRGAAARGGQRRGETPELSPHQKLSSLCLTLLQRDWSEGDLKFVYKSSTLGVLVRAHLRWAKDPLQAVEVMGSEVLPLLLETGDCLGPAEGYPTLTAASFSHFYTPLLQA 1178
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BLAST of mRNA_Ecto-sp13_S_contig1753.5274.1 vs. uniprot
Match: A0A7S1XYM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYM3_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.380e-15
Identity = 44/99 (44.44%), Postives = 56/99 (56.57%), Query Frame = 0 
Query:  142 RGEAPELSP-HQKLSSLCLTLLQRDWSEGDLKFVYKSSTLGVLVRAHLRWAKDPLQAVEVMASEVLPLLLETGDCLGPAEGYPTLTAASFSHFYTPLLQ 239
            R E P L+  H  +S+     L++DW   + KF YKS  LG  V  HL  A D L A E +  +VLP L+ T  C GPA GYPTLT  SF H++  LL+
Sbjct:   34 REEEPRLTALHHMISTCAAEYLEKDWGVANPKFRYKSGDLGFFVETHLALAPDALAAAEGLCVDVLPRLVTTPKCEGPAPGYPTLTVGSFVHYHGALLR 132
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BLAST of mRNA_Ecto-sp13_S_contig1753.5274.1 vs. uniprot
Match: K3WVZ1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVZ1_GLOUD)

HSP 1 Score: 54.7 bits (130), Expect = 2.610e-5
Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = 0 
Query:  138 GGQRRGEAPELSPHQKLSSLCLTLLQRDWSEGDLKFVYKSSTLGVLVRAHLRWAKDPLQAVEVMASE-VLPLLLETGDCLGPAEGYPTLTAASFSHFY 234
            G ++R E+   +   K+S L L+ LQ+DWS+GD KFVYK++ L V +  +L  +   L +++ +A +  L LL   G  +   E YPTL   + S ++
Sbjct:   17 GAEQRRESLTNAIAAKISGLALSYLQKDWSKGDAKFVYKNAHLEVFLNGYLYHSAVVLDSIQTLALDGFLELLEHNGKRV---EAYPTLDKKTVSVYH 111
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1753.5274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0C8_ECTSI6.430e-14797.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1XYM3_9STRA3.380e-1544.44Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
K3WVZ1_GLOUD2.610e-534.69Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029448Fanconi anaemia protein FANCD2PANTHERPTHR32086FAMILY NOT NAMEDcoord: 22..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1753contigEcto-sp13_S_contig1753:609..4633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1753.5274.1mRNA_Ecto-sp13_S_contig1753.5274.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1753 606..9410 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1753.5274.1 ID=prot_Ecto-sp13_S_contig1753.5274.1|Name=mRNA_Ecto-sp13_S_contig1753.5274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
MVGNSLGGMEDEIGVFCSDVSDEEMLLPCLDFTLKVLSILCGSDEILGSE
AGRDVLGQCLADAFYDAGDLDESLDGSQNHPAADEAFVMCFDKLEDFAST
VQQLPLAVQLVQVMEAVATARVRCLAAQPAGRGAAARGGQRRGEAPELSP
HQKLSSLCLTLLQRDWSEGDLKFVYKSSTLGVLVRAHLRWAKDPLQAVEV
MASEVLPLLLETGDCLGPAEGYPTLTAASFSHFYTPLLQAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029448FANCD2