prot_Ecto-sp13_S_contig17518.5269.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17518.5269.1
Unique Nameprot_Ecto-sp13_S_contig17518.5269.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length92
Homology
BLAST of mRNA_Ecto-sp13_S_contig17518.5269.1 vs. uniprot
Match: D7FV81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV81_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 5.320e-58
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
Query:    1 MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLLQTSATA 92
            MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLLQTSATA
Sbjct:  241 MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLLQTSATA 332          
BLAST of mRNA_Ecto-sp13_S_contig17518.5269.1 vs. uniprot
Match: A0A7S1YNE2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YNE2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.370e-29
Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 0
Query:    1 MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKK---ATVLLQTSATA 92
            MV TTDVGFPIRLEGLV ++   F +YEPELFPGLIYR+  P++ FLIFVSGKVV+TGAK+   L++ F K+YP L +++K   A++   T+ATA
Sbjct:   40 MVGTTDVGFPIRLEGLVYAHS-TFASYEPELFPGLIYRLVSPRVVFLIFVSGKVVITGAKTENDLKEAFAKLYPVLFEYRKVHVASLPASTNATA 133          
BLAST of mRNA_Ecto-sp13_S_contig17518.5269.1 vs. uniprot
Match: A0A059LCR3_9CHLO (Transcription factor TFIID n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LCR3_9CHLO)

HSP 1 Score: 110 bits (274), Expect = 8.040e-29
Identity = 55/85 (64.71%), Postives = 63/85 (74.12%), Query Frame = 0
Query:    1 MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVL 85
            MV + DV FPIRLEGL AS    FC+YEPELFPGLIYRM DPKI  LIFVSGKVVLTGAK   ++   F+ +YP L +FKK  +L
Sbjct:   36 MVGSCDVRFPIRLEGL-ASTHSVFCSYEPELFPGLIYRMVDPKIVLLIFVSGKVVLTGAKRRDEIYRAFENIYPVLKEFKKGGIL 119          
BLAST of mRNA_Ecto-sp13_S_contig17518.5269.1 vs. uniprot
Match: A0A1D2AC59_AUXPR (Uncharacterized protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AC59_AUXPR)

HSP 1 Score: 111 bits (277), Expect = 1.950e-28
Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    1 MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVL 85
            MV + DV FPIRLEGL AS+   FC+YEPELFPGLIYRM DPKI  LIFVSGKVVLTGAK  +++   F+ +YP L +FKK  +L
Sbjct:  119 MVGSCDVRFPIRLEGL-ASSHSVFCSYEPELFPGLIYRMVDPKIVLLIFVSGKVVLTGAKRREEIYQAFENIYPVLKEFKKGGLL 202          
BLAST of mRNA_Ecto-sp13_S_contig17518.5269.1 vs. uniprot
Match: A0A5J9V955_9POAL (Uncharacterized protein n=2 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9V955_9POAL)

HSP 1 Score: 110 bits (276), Expect = 3.560e-28
Identity = 55/81 (67.90%), Postives = 63/81 (77.78%), Query Frame = 0
Query:    1 MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKK 81
            MVA+ DV FPIRLEGL A N G F NYEPE+FPGLIYRM DPKI  L+FVSGKVVLTGAK  +Q+   F+ +YP L QF+K
Sbjct:  158 MVASCDVKFPIRLEGL-ALNCGIFANYEPEIFPGLIYRMADPKIVLLVFVSGKVVLTGAKVREQIYTAFENIYPMLSQFRK 237          
BLAST of mRNA_Ecto-sp13_S_contig17518.5269.1 vs. uniprot
Match: A0A7J7ISE2_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ISE2_9RHOD)

HSP 1 Score: 110 bits (275), Expect = 4.790e-28
Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    1 MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKA 82
            +VA+ DV FPIRLE L  ++   + +YEPELFPGL+YRM +PK+  LIFVSGKVV+TGAKS   L D F+K+YP LCQF+KA
Sbjct:  137 LVASADVRFPIRLEALAHAHSN-YAHYEPELFPGLVYRMLEPKLALLIFVSGKVVITGAKSRDDLNDAFQKLYPVLCQFRKA 217          
BLAST of mRNA_Ecto-sp13_S_contig17518.5269.1 vs. uniprot
Match: UPI0019D41AE8 (TATA box-binding protein-like 2 isoform X2 n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=UPI0019D41AE8)

HSP 1 Score: 107 bits (268), Expect = 7.270e-28
Identity = 54/82 (65.85%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    1 MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKA 82
            MV + DV FPIRLEGLV ++Q  FC+YEPELFPGLIYRM  P+I  LIFVSGKVVLTGAK   ++ D F+ +YP L  FKKA
Sbjct:   80 MVGSCDVRFPIRLEGLVLTHQQ-FCSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKDRSEIYDAFENIYPILKGFKKA 160          
BLAST of mRNA_Ecto-sp13_S_contig17518.5269.1 vs. uniprot
Match: A0A061R1E7_9CHLO (Transcription initiation factor TFIID TATA-box-binding protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R1E7_9CHLO)

HSP 1 Score: 110 bits (276), Expect = 1.330e-27
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 0
Query:    1 MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATV 84
            +V + DV FPIRLEGL  S+Q  FCNYEPELFPGLIYRMK PKI  LIFVSGKVVLTGAK   ++   F+++YP L +F+KA V
Sbjct:  196 IVGSCDVQFPIRLEGLSWSHQ-MFCNYEPELFPGLIYRMKQPKIVLLIFVSGKVVLTGAKHRNEIYQAFEQLYPVLREFRKADV 278          
BLAST of mRNA_Ecto-sp13_S_contig17518.5269.1 vs. uniprot
Match: A0A507C8B1_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C8B1_9FUNG)

HSP 1 Score: 108 bits (270), Expect = 1.770e-27
Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = 0
Query:    1 MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKK 81
            +V + DV FPIRLEGL AS+   F NYEPELFPGLIYRM DPK+  LIFVSGKVVLTGAK+ + + D F+K++P L  +KK
Sbjct:  142 IVGSCDVKFPIRLEGL-ASDHSAFANYEPELFPGLIYRMVDPKVVLLIFVSGKVVLTGAKTREHIYDAFEKIFPVLSMYKK 221          
BLAST of mRNA_Ecto-sp13_S_contig17518.5269.1 vs. uniprot
Match: A9UR58_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UR58_MONBE)

HSP 1 Score: 107 bits (267), Expect = 1.800e-27
Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    1 MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKK 81
            MV + DV FPIRLEGL A++Q CFC YEPE+FPGL+YRM  PK+  LIFVSGKVV+TGAKS Q + D    +Y  L QF+K
Sbjct:  101 MVGSCDVRFPIRLEGLAANHQ-CFCTYEPEIFPGLVYRMVKPKVVLLIFVSGKVVVTGAKSRQTIHDAINAIYSILQQFRK 180          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17518.5269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV81_ECTSI5.320e-58100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1YNE2_9STRA1.370e-2958.95Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A059LCR3_9CHLO8.040e-2964.71Transcription factor TFIID n=1 Tax=Helicosporidium... [more]
A0A1D2AC59_AUXPR1.950e-2864.71Uncharacterized protein n=3 Tax=Auxenochlorella pr... [more]
A0A5J9V955_9POAL3.560e-2867.90Uncharacterized protein n=2 Tax=Eragrostis curvula... [more]
A0A7J7ISE2_9RHOD4.790e-2862.20Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
UPI0019D41AE87.270e-2865.85TATA box-binding protein-like 2 isoform X2 n=1 Tax... [more]
A0A061R1E7_9CHLO1.330e-2765.48Transcription initiation factor TFIID TATA-box-bin... [more]
A0A507C8B1_9FUNG1.770e-2764.20Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
A9UR58_MONBE1.800e-2762.96Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 23..38
score: 77.53
coord: 42..58
score: 74.97
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 1..78
e-value: 5.0E-28
score: 96.9
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 1..82
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 1..83
e-value: 1.2E-33
score: 116.6
NoneNo IPR availablePANTHERPTHR10126:SF6TATA BOX-BINDING PROTEIN-LIKE PROTEIN 2-RELATEDcoord: 1..82
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 1..84
IPR030491TATA-box binding protein, conserved sitePROSITEPS00351TFIIDcoord: 27..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17518contigEcto-sp13_S_contig17518:2497..3149 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17518.5269.1mRNA_Ecto-sp13_S_contig17518.5269.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17518 2497..3170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17518.5269.1 ID=prot_Ecto-sp13_S_contig17518.5269.1|Name=mRNA_Ecto-sp13_S_contig17518.5269.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp
MVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFV
SGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLLQTSATA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf
IPR030491TBP_CS