prot_Ecto-sp13_S_contig17507.5261.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17507.5261.1
Unique Nameprot_Ecto-sp13_S_contig17507.5261.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length42
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17507.5261.1 vs. uniprot
Match: D7FVC9_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC9_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 7.000e-19
Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 0 
Query:    1 LFEASTAVLRRDPACLLAALCRDGGPLRADLDGTINVDRDW 41
            LFEASTAVLRRDPACLLAALC DGGPLRADL GTINVDRDW
Sbjct:   84 LFEASTAVLRRDPACLLAALCHDGGPLRADLGGTINVDRDW 124
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17507.5261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVC9_ECTSI7.000e-1995.12BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17507contigEcto-sp13_S_contig17507:3054..3179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17507.5261.1mRNA_Ecto-sp13_S_contig17507.5261.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17507 3054..3179 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17507.5261.1 ID=prot_Ecto-sp13_S_contig17507.5261.1|Name=mRNA_Ecto-sp13_S_contig17507.5261.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=42bp
LFEASTAVLRRDPACLLAALCRDGGPLRADLDGTINVDRDW*
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