prot_Ecto-sp13_S_contig17485.5251.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17485.5251.1
Unique Nameprot_Ecto-sp13_S_contig17485.5251.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length218
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17485.5251.1 vs. uniprot
Match: A0A6H5KWI4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWI4_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 3.040e-40
Identity = 198/221 (89.59%), Postives = 202/221 (91.40%), Query Frame = 0 
Query:    1 QVVAVVVAGVIGSRYLLVQKGGERGRSGGRRXXXXXXXXXASPKSPLAGIGQPRVSPEVAAADLKKRADSLKSANFDVDLDLFGDAVTDLPARPPXXXXXXXXXXXXXXXAMKGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---YSIKPEKSKRKPILSLFKRDTGPQRSTTMQEALSDE 218
            +VVAVVVAGVIGSRYLLVQ+GG+        XXXXXXXXX +PKSPLAGIGQPRVSPEVAAADLKKRADSLKSANFDVDLDLFGDAV DLPARPPXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   YSIKPEKSKRKPILSLFKRDTGPQRSTTMQEALSDE
Sbjct:  236 EVVAVVVAGVIGSRYLLVQRGGKXXXXXXXXXXXXXXXXXXAPKSPLAGIGQPRVSPEVAAADLKKRADSLKSANFDVDLDLFGDAVADLPARPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSIKPEKSKRKPILSLFKRDTGPQRSTTMQEALSDE 456
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17485.5251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KWI4_9PHAE3.040e-4089.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17485contigEcto-sp13_S_contig17485:74..3670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17485.5251.1mRNA_Ecto-sp13_S_contig17485.5251.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17485 74..3670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17485.5251.1 ID=prot_Ecto-sp13_S_contig17485.5251.1|Name=mRNA_Ecto-sp13_S_contig17485.5251.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=218bp
QVVAVVVAGVIGSRYLLVQKGGERGRSGGRRRGRGGGGGGASPKSPLAGI
GQPRVSPEVAAADLKKRADSLKSANFDVDLDLFGDAVTDLPARPPPPAPP
AAEPSPSPADAMKGVVAAASDSAAAAAEVESVTTAEAESAAGPPPIEAAP
AAPPAVAAEPAPATPEPAPAAVAEPTPSPSTSYSIKPEKSKRKPILSLFK
RDTGPQRSTTMQEALSDE
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