prot_Ecto-sp13_S_contig17482.5249.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17482.5249.1
Unique Nameprot_Ecto-sp13_S_contig17482.5249.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length523
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17482.5249.1 vs. uniprot
Match: A0A6H5K450_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K450_9PHAE)

HSP 1 Score: 479 bits (1232), Expect = 6.220e-155
Identity = 442/525 (84.19%), Postives = 449/525 (85.52%), Query Frame = 0 
Query:    1 MTRGGNGVHSSTQRSSSSIAAGLRSGSXXXXXXXXXXXXXXXXTAVNFAEEVARGLEALEAVAIAAKTSSSRSPPGTRNGSFSSTIGGGDDFTPLRSADSCHTVEASEPPGWMGRGRKEGRGMAALKSVAGSHGSSFPGSSSSAAGGGTTSLPLAEFPRLQSSTPPPKPAGLSLVRINSDASTNSGAGFGGAVNTRSSSELSPSFTARVAAGGKNAAPGGNSNSSSADNSPEMRFNKSRDSVLILKSAPGVCRSRKVRSSGSAAXXXXXAKNNASLSVGKTNDTIAAARRSLRRTGSLPVADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQMSPRAKGFSAIMFHESFTPVDTKAGADPTKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRR-------IGASVAALAGGSSIAAENEQLKLESRRLASALSTARESADMTEERSRVLAKQATLRVSG 518
            MTRGGNGVHSSTQRSSSSIAAGLRSGSXXXXXXXXXXXXXXXX   N AEEVARGLEALEAVAIAAKTSSSRSPPGTRNGSFSSTIGGGDDFTPLRSADSCHTVEAS+PPGW GRGRKE RGMAALKSVAG HGSSFPGSS+SAAG  TTSLPLAEFPRLQSSTPPPKPAGLSLVRINSDASTNSGAGFGGA NTRS+SE SPSF ARVAAGGKNAAPGGNSNSSSADNSPE+RFNKSRDSVLILKSAPGVCRSRK        XXXXX                           SLPVA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             +QMSPRAKGFSAIMFHESFT VDTKAGADP KKQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         +GASVAALAGGSSIAAENEQLKLESRRLASALSTARESADMT+ERSRVLAKQATLRV G
Sbjct:    1 MTRGGNGVHSSTQRSSSSIAAGLRSGSXXXXXXXXXXXXXXXXXXXNSAEEVARGLEALEAVAIAAKTSSSRSPPGTRNGSFSSTIGGGDDFTPLRSADSCHTVEASDPPGWRGRGRKEERGMAALKSVAGLHGSSFPGSSASAAGDCTTSLPLAEFPRLQSSTPPPKPAGLSLVRINSDASTNSGAGFGGAANTRSTSEFSPSFMARVAAGGKNAAPGGNSNSSSADNSPEVRFNKSRDSVLILKSAPGVCRSRKASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNKM---------QQMSPRAKGFSAIMFHESFTSVDTKAGADPIKKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGASVAALAGGSSIAAENEQLKLESRRLASALSTARESADMTKERSRVLAKQATLRVRG 516
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17482.5249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K450_9PHAE6.220e-15584.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17482contigEcto-sp13_S_contig17482:1323..3464 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17482.5249.1mRNA_Ecto-sp13_S_contig17482.5249.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17482 1323..3464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17482.5249.1 ID=prot_Ecto-sp13_S_contig17482.5249.1|Name=mRNA_Ecto-sp13_S_contig17482.5249.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=523bp
MTRGGNGVHSSTQRSSSSIAAGLRSGSRKTTAAGGAAPAAAAATAVNFAE
EVARGLEALEAVAIAAKTSSSRSPPGTRNGSFSSTIGGGDDFTPLRSADS
CHTVEASEPPGWMGRGRKEGRGMAALKSVAGSHGSSFPGSSSSAAGGGTT
SLPLAEFPRLQSSTPPPKPAGLSLVRINSDASTNSGAGFGGAVNTRSSSE
LSPSFTARVAAGGKNAAPGGNSNSSSADNSPEMRFNKSRDSVLILKSAPG
VCRSRKVRSSGSAAAAGAAAKNNASLSVGKTNDTIAAARRSLRRTGSLPV
ADAANNNNASAAAVAAAAAASTGTPDDDQQQQQQQQQQQQPKRSFSSSSL
TKKKQMSPRAKGFSAIMFHESFTPVDTKAGADPTKKQQRGWWVGENNHHP
LSPPPTLSSPPRRRAPPQQQQQQQQQQRQQQQGQQAGEGVVVVAEDSRSA
RGGSSGARRIGASVAALAGGSSIAAENEQLKLESRRLASALSTARESADM
TEERSRVLAKQATLRVSGRKEKK
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