prot_Ecto-sp13_S_contig17470.5240.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17470.5240.1
Unique Nameprot_Ecto-sp13_S_contig17470.5240.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
BLAST of mRNA_Ecto-sp13_S_contig17470.5240.1 vs. uniprot
Match: D7FQZ1_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQZ1_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 4.830e-99
Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 0
Query:    1 QADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSS 145
            +ADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSS
Sbjct:   51 EADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSS 195          
BLAST of mRNA_Ecto-sp13_S_contig17470.5240.1 vs. uniprot
Match: A0A835ZBU9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBU9_9STRA)

HSP 1 Score: 270 bits (689), Expect = 3.020e-87
Identity = 131/145 (90.34%), Postives = 139/145 (95.86%), Query Frame = 0
Query:    1 QADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSS 145
            +ADKLLS EFQPVLEQL+ HCS +RQICLFSATFPVTVK FKD+HI NPYEINLM+ELTLKGITQ+YAFVAERQKVHCLNTLF+KL+VNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLV S
Sbjct:  205 EADKLLSVEFQPVLEQLLAHCSPQRQICLFSATFPVTVKAFKDKHIENPYEINLMEELTLKGITQYYAFVAERQKVHCLNTLFTKLDVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVCS 349          
BLAST of mRNA_Ecto-sp13_S_contig17470.5240.1 vs. uniprot
Match: F0YP09_AURAN (Uncharacterized protein n=4 Tax=Pelagomonadales TaxID=54409 RepID=F0YP09_AURAN)

HSP 1 Score: 266 bits (680), Expect = 5.020e-86
Identity = 126/145 (86.90%), Postives = 141/145 (97.24%), Query Frame = 0
Query:    1 QADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSS 145
            +ADKLLSPEF+P+LE+LV+HCS +RQICLFSATFPVTVK+FK++ I NPYEINLMD+LTLKGITQFYAFV ERQKVHCL+TLF+KLE+NQS+IFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNG+TRHLVSS
Sbjct:  194 EADKLLSPEFEPLLEKLVHHCSPERQICLFSATFPVTVKNFKEKFIHNPYEINLMDDLTLKGITQFYAFVEERQKVHCLHTLFTKLEINQSVIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGSTRHLVSS 338          
BLAST of mRNA_Ecto-sp13_S_contig17470.5240.1 vs. uniprot
Match: K3WAL5_GLOUD (Uncharacterized protein n=42 Tax=Oomycota TaxID=4762 RepID=K3WAL5_GLOUD)

HSP 1 Score: 264 bits (674), Expect = 4.040e-85
Identity = 125/145 (86.21%), Postives = 137/145 (94.48%), Query Frame = 0
Query:    1 QADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSS 145
            +ADKLLSPEFQP+LEQL+NH ++ RQICLFSATFPVTVK FKD+ I NPYEINLMDELTLKG++QFYAFV ERQKVHCLNTLFSKL++NQSIIFCNSVNRVELLAKK+TELGYSCFYIHAKM Q+HRNRVFHEFRNGATRHLV S
Sbjct:  194 EADKLLSPEFQPLLEQLLNHTAKNRQICLFSATFPVTVKAFKDKFIENPYEINLMDELTLKGVSQFYAFVEERQKVHCLNTLFSKLDINQSIIFCNSVNRVELLAKKVTELGYSCFYIHAKMNQAHRNRVFHEFRNGATRHLVCS 338          
BLAST of mRNA_Ecto-sp13_S_contig17470.5240.1 vs. uniprot
Match: W7T0L9_9STRA (RNA helicase,ATP-dependent, DEAD-box type n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T0L9_9STRA)

HSP 1 Score: 263 bits (673), Expect = 4.810e-85
Identity = 127/145 (87.59%), Postives = 135/145 (93.10%), Query Frame = 0
Query:    1 QADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSS 145
            +ADKLLSPEFQP+LE+L+ HC   RQI LFSATFPV VK FKD+HI NPYEINLMDELTL+GITQ+YAFV ERQKVHCLNTLFSKLE+NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNG TRHLVSS
Sbjct:  188 EADKLLSPEFQPILERLLAHCMPNRQIGLFSATFPVAVKTFKDKHIENPYEINLMDELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSS 332          
BLAST of mRNA_Ecto-sp13_S_contig17470.5240.1 vs. uniprot
Match: A0A7S2SW80_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW80_9STRA)

HSP 1 Score: 261 bits (668), Expect = 2.510e-84
Identity = 124/145 (85.52%), Postives = 138/145 (95.17%), Query Frame = 0
Query:    1 QADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSS 145
            +ADKLLSPEFQP+LE L++  S  RQICLFSATFPVTVK+FKD+ I+NPYEINLMD+LTLKGITQ+YAFV E+QKVHCLNTLFSKLE+NQS+IFCNSVNRVELLAK+ITELGYSCFYIHAKMQQ+HRNRVFHEFRNGATRHLVSS
Sbjct:  185 EADKLLSPEFQPILESLISFSSPNRQICLFSATFPVTVKNFKDKFITNPYEINLMDDLTLKGITQYYAFVQEKQKVHCLNTLFSKLEINQSVIFCNSVNRVELLAKRITELGYSCFYIHAKMQQAHRNRVFHEFRNGATRHLVSS 329          
BLAST of mRNA_Ecto-sp13_S_contig17470.5240.1 vs. uniprot
Match: UPI000C1D6764 (DEAD-box ATP-dependent RNA helicase 12-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D6764)

HSP 1 Score: 246 bits (629), Expect = 1.950e-81
Identity = 119/143 (83.22%), Postives = 132/143 (92.31%), Query Frame = 0
Query:    1 QADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLV 143
            QADKLLSPEFQP +EQL++  S +RQI +FSATFPVTVKDFKDR++  PY INLMDELTLKGITQ+YAFV ERQKVHCLNTLFSKL++NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM Q+HRNRVFH+FRNGA R+LV
Sbjct:   15 QADKLLSPEFQPSIEQLIHFMSPRRQILMFSATFPVTVKDFKDRYLQKPYIINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQNHRNRVFHDFRNGACRNLV 157          
BLAST of mRNA_Ecto-sp13_S_contig17470.5240.1 vs. uniprot
Match: A0A0A9TBS0_ARUDO (ATP-dependent RNA helicase dhh1 n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9TBS0_ARUDO)

HSP 1 Score: 243 bits (620), Expect = 3.280e-80
Identity = 117/143 (81.82%), Postives = 129/143 (90.21%), Query Frame = 0
Query:    1 QADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLV 143
            +ADKLLSPEFQP +EQL+ +    RQI +FSATFPVTVKDFKD+++  PY INLMDELTLKGITQFYAFV ERQKVHCLNTLFSKL++NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM Q HRNRVFH+FRNGA R+LV
Sbjct:    6 EADKLLSPEFQPSVEQLIRYLPANRQILMFSATFPVTVKDFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 148          
BLAST of mRNA_Ecto-sp13_S_contig17470.5240.1 vs. uniprot
Match: K0SLJ3_THAOC (Uncharacterized protein n=3 Tax=Coscinodiscophyceae TaxID=33836 RepID=K0SLJ3_THAOC)

HSP 1 Score: 251 bits (641), Expect = 3.740e-80
Identity = 118/145 (81.38%), Postives = 132/145 (91.03%), Query Frame = 0
Query:    1 QADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSS 145
            +ADKLLSPEFQPVLE+++  C    QICLFSATFPVTVKDF  +H+  PY INLM+ELTL+GITQFYA+V ERQKVHCLNTLFSKLE+NQSIIFCNSVNRVELLAKK+TELGYSCFYIHAKMQQ++RNRVFHEFRNG TRHLV+S
Sbjct:  193 EADKLLSPEFQPVLEKIIGLCDSSHQICLFSATFPVTVKDFCQKHVPKPYSINLMEELTLRGITQFYAYVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKVTELGYSCFYIHAKMQQANRNRVFHEFRNGGTRHLVTS 337          
BLAST of mRNA_Ecto-sp13_S_contig17470.5240.1 vs. uniprot
Match: B8BVK5_THAPS (Atp-dependent RNA DEAD/DEAH box helicase n=4 Tax=Bacillariophyta TaxID=2836 RepID=B8BVK5_THAPS)

HSP 1 Score: 251 bits (640), Expect = 5.150e-80
Identity = 118/145 (81.38%), Postives = 135/145 (93.10%), Query Frame = 0
Query:    1 QADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSS 145
            +ADKLLS EFQPVLE++++ C +K QICLFSATFPVTVK+F  + + NPY INLMDELTL+GITQFYA+V ERQKVHCLNTLFSKLE+NQSIIFCNSVNRVELLAKK+TELGYSC+YIHAKMQQ++RNRVFHEFRNGATRHLV+S
Sbjct:  192 EADKLLSTEFQPVLEKIIDLCDKKHQICLFSATFPVTVKEFCQKFVPNPYSINLMDELTLRGITQFYAYVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKVTELGYSCYYIHAKMQQANRNRVFHEFRNGATRHLVTS 336          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17470.5240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQZ1_ECTSI4.830e-9999.31DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835ZBU9_9STRA3.020e-8790.34P-loop containing nucleoside triphosphate hydrolas... [more]
F0YP09_AURAN5.020e-8686.90Uncharacterized protein n=4 Tax=Pelagomonadales Ta... [more]
K3WAL5_GLOUD4.040e-8586.21Uncharacterized protein n=42 Tax=Oomycota TaxID=47... [more]
W7T0L9_9STRA4.810e-8587.59RNA helicase,ATP-dependent, DEAD-box type n=3 Tax=... [more]
A0A7S2SW80_9STRA2.510e-8485.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI000C1D67641.950e-8183.22DEAD-box ATP-dependent RNA helicase 12-like n=1 Ta... [more]
A0A0A9TBS0_ARUDO3.280e-8081.82ATP-dependent RNA helicase dhh1 n=1 Tax=Arundo don... [more]
K0SLJ3_THAOC3.740e-8081.38Uncharacterized protein n=3 Tax=Coscinodiscophycea... [more]
B8BVK5_THAPS5.150e-8081.38Atp-dependent RNA DEAD/DEAH box helicase n=4 Tax=B... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 77..145
e-value: 1.5E-9
score: 38.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 62..145
score: 10.23
NoneNo IPR availableGENE3D3.40.50.300coord: 1..59
e-value: 3.1E-10
score: 41.9
NoneNo IPR availableGENE3D3.40.50.300coord: 60..145
e-value: 6.5E-22
score: 79.5
NoneNo IPR availablePANTHERPTHR24031:SF661coord: 2..144
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 2..144
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..52
score: 7.969
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17470contigEcto-sp13_S_contig17470:1199..3268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17470.5240.1mRNA_Ecto-sp13_S_contig17470.5240.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17470 1199..3268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17470.5240.1 ID=prot_Ecto-sp13_S_contig17470.5240.1|Name=mRNA_Ecto-sp13_S_contig17470.5240.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
QADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPY
EINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNR
VELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase