prot_Ecto-sp13_S_contig1747.5239.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1747.5239.1
Unique Nameprot_Ecto-sp13_S_contig1747.5239.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length785
Homology
BLAST of mRNA_Ecto-sp13_S_contig1747.5239.1 vs. uniprot
Match: D7FK09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK09_ECTSI)

HSP 1 Score: 1014 bits (2622), Expect = 0.000e+0
Identity = 605/786 (76.97%), Postives = 624/786 (79.39%), Query Frame = 0
Query:    1 MARKKTGSVQGDEGAALEERRRVLFHASSLNRSDIIKKVVSAAVSNNDTTIGAVAPGSSSSTSGDCVVEPEVLDHVDEHGLTALHHAVKKSSLDAIRVLLRLGVDVTARGGAQGPFPNLTAYQVALSGGCKGNPEEMKQIFLTEAVQAIAEGDAERLGEFLDAGVEASSEYGADGSNGEGGSSTSLAEWAEQLGQSDMLTSLSASLANDNATIRRRDDGEAGNPDAEASARGDTGETAPHGAKEAEAEGSRVWGDGGRGAAADDVGLFVGELREAIVDLTAESEELEEELAHRGTLGIIKRARQTRQDLILASSEVDTANALCDKWRAEEDAASEENARLQAQVIEAQLAVQRHRAGLQGSDGDDSRNSPIARGKETPPPSPARDRPEAQASKASAAGEKERIKNNSSSSPRAPPSPKNMTVADGDVRAGEEEGDADLERDDGVGNPGGTEDSRRTEEAEALGSQLQIIAMHLEDELRMMRSLIDGEGAVGVVRRIRALREEIEAAEEVARQTYAVSRYLQARVIVLHEAGNELFAQLDRLNGYLREPPGAALVANGEPPRAANKEDIDDDDITLERGHYHSGPLPSGNEEENTLELRRSIDGGEDEVSEENMTHPHAPPDEDSLSPAAEVANEGSAVGSTSSRXXXXXXXXXXEGGEGEGPVFIRPQELPEAGVFD-SDAGEVQPPSPANPVGEESAAATEESDTAG-SGREGRARALLNARGVETRSRARSAKKVTVVQDVLSVLFGWEVSSDAERKAARGELEELGSGGXXXXXXXXAGVMFA 784
            MARKKTGSV+ DEGAA                                            STSGDC VE EVL HVDE+GLTALHHAVKKSSLDAIRVLLRLGVDVTARGGAQGPFPNLTAYQVALSGGCKGNPEE+KQIFLTEAVQAIAEGDAERLGEFLDAGVEASSEYGADG                                              GNP+AE SARG  GET PHGA+EAEAEGSRVW DGGRGAAADDVGLFVGELREAIVDLTAESEELEEELAHRGT GIIKRARQTRQDLILASSEVDTANALCDKWRAEEDAASE+NARLQAQVIEAQLAVQRHRAGLQGSDGDD+R+SPIARG++TPPPS                             PR  PSP+NMTVA GDVRAGEEEGDADLERD GVGNPGGTEDSRRTEEAEALGSQLQIIAMHLEDELRMMRSLIDGEGAVGVVRRIRALREEIEAAEE ARQTYAVSRYLQARVIVLHEAGNELFAQLDRLNGYLREPPGAAL+ANGEPPRAANKEDIDDDDITLERGHYHSGP+PSGNEE NTLELR SI+GGEDE SEENMT PHAPPDEDSL+PA EVA EG         XXXXXXXXXXEGGEGEGPVF+RPQELPEAGVFD SDAGEVQPPSPAN VGE SAAATEESDTAG SGREGRARALLNARGV+TRS AR+AKKVTVVQDVLSVLFGWEVSSDAERKAARGELEE+GSGG        AGVMFA
Sbjct:    1 MARKKTGSVEEDEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSGDCDVEREVLGHVDENGLTALHHAVKKSSLDAIRVLLRLGVDVTARGGAQGPFPNLTAYQVALSGGCKGNPEEIKQIFLTEAVQAIAEGDAERLGEFLDAGVEASSEYGADG----------------------------------------------GNPNAETSARGGMGETGPHGAEEAEAEGSRVWDDGGRGAAADDVGLFVGELREAIVDLTAESEELEEELAHRGTFGIIKRARQTRQDLILASSEVDTANALCDKWRAEEDAASEDNARLQAQVIEAQLAVQRHRAGLQGSDGDDNRSSPIARGEKTPPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTQPSPENMTVAGGDVRAGEEEGDADLERDGGVGNPGGTEDSRRTEEAEALGSQLQIIAMHLEDELRMMRSLIDGEGAVGVVRRIRALREEIEAAEEEARQTYAVSRYLQARVIVLHEAGNELFAQLDRLNGYLREPPGAALLANGEPPRAANKEDIDDDDITLERGHYHSGPVPSGNEEGNTLELR-SINGGEDERSEENMTQPHAPPDEDSLAPAEEVAAEGXXXXXXXXXXXXXXXXXXXEGGEGEGPVFVRPQELPEAGVFDISDAGEVQPPSPANSVGEGSAAATEESDTAGGSGREGRARALLNARGVDTRSTARNAKKVTVVQDVLSVLFGWEVSSDAERKAARGELEEMGSGGNFGGSGGMAGVMFA 739          
BLAST of mRNA_Ecto-sp13_S_contig1747.5239.1 vs. uniprot
Match: A0A8J2Q5E2_9BILA (Hypothetical protein n=1 Tax=Cercopithifilaria johnstoni TaxID=2874296 RepID=A0A8J2Q5E2_9BILA)

HSP 1 Score: 62.4 bits (150), Expect = 3.310e-6
Identity = 49/141 (34.75%), Postives = 73/141 (51.77%), Query Frame = 0
Query:   71 EVLDHVDEHGLTALHHAVKKSSLDAIRVLLRLGVDVTARGGAQGPFPNLTAYQVALSGGCKGNPEEMKQIFLTEAVQAIAEGDAERLGEFLDAGVEASSEYGADGSNGEGGSSTSLAEWAEQLGQSDMLTSLSASLANDNA 211
            E +D +  +G T LHHAV ++S+D++R LL  GV+   +        N TAY+VA S       EE+K  F+ E +QA+A+ +  R+ + + AG+   S    D  N      T+L  WA   G  D++  L  S AN NA
Sbjct:   55 EQVDQICYNGGTVLHHAVARNSVDSVRTLLSAGVNPCIQNDN-----NNTAYRVAFS-------EEVKNAFVQELLQAVAQSNLGRVCQMISAGLNVDSIDAVDTGN------TAL-HWAASYGNEDVVRILCQSGANVNA 176          
BLAST of mRNA_Ecto-sp13_S_contig1747.5239.1 vs. uniprot
Match: A0A183H0K0_9BILA (ANK_REP_REGION domain-containing protein n=2 Tax=Onchocerca TaxID=6281 RepID=A0A183H0K0_9BILA)

HSP 1 Score: 58.5 bits (140), Expect = 4.570e-5
Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = 0
Query:   71 EVLDHVDEHGLTALHHAVKKSSLDAIRVLLRLGVDVTARGGAQGPFPNLTAYQVALSGGCKGNPEEMKQIFLTEAVQAIAEGDAERLGEFLDAGVEASSEYGADGSNGEGGSSTSLAEWAEQLGQSDMLTSLSASLANDN 210
            E +D +  +G T LH+AV ++S+D++R LL  GV+   +        N TAY++A S       EE+K  F+ E +QA+A+ +  R+ + + AGV   S    D SN      T+L  W+   G  D++  L  S AN N
Sbjct:   52 EQVDQICYNGGTVLHYAVARNSVDSVRTLLSAGVNPCVQNDN-----NNTAYRMASS-------EEVKNAFVQELLQAVAQSNLGRVCQMISAGVSVDSIDATDTSN------TAL-HWSASYGNEDVVRILCQSGANVN 172          
BLAST of mRNA_Ecto-sp13_S_contig1747.5239.1 vs. uniprot
Match: A0A238BYF5_9BILA (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Onchocerca TaxID=6281 RepID=A0A238BYF5_9BILA)

HSP 1 Score: 58.5 bits (140), Expect = 5.420e-5
Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = 0
Query:   71 EVLDHVDEHGLTALHHAVKKSSLDAIRVLLRLGVDVTARGGAQGPFPNLTAYQVALSGGCKGNPEEMKQIFLTEAVQAIAEGDAERLGEFLDAGVEASSEYGADGSNGEGGSSTSLAEWAEQLGQSDMLTSLSASLANDN 210
            E +D +  +G T LH+AV ++S+D++R LL  GV+   +        N TAY++A S       EE+K  F+ E +QA+A+ +  R+ + + AGV   S    D SN      T+L  W+   G  D++  L  S AN N
Sbjct:   52 EQVDQICYNGGTVLHYAVARNSVDSVRTLLSAGVNPCVQNDN-----NNTAYRMASS-------EEVKNAFVQELLQAVAQSNLGRVCQMISAGVSVDSIDATDTSN------TAL-HWSASYGNEDVVRILCQSGANVN 172          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1747.5239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FK09_ECTSI0.000e+076.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2Q5E2_9BILA3.310e-634.75Hypothetical protein n=1 Tax=Cercopithifilaria joh... [more]
A0A183H0K0_9BILA4.570e-533.57ANK_REP_REGION domain-containing protein n=2 Tax=O... [more]
A0A238BYF5_9BILA5.420e-533.57Eukaryotic translation initiation factor 3 subunit... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 323..350
NoneNo IPR availableCOILSCoilCoilcoord: 489..516
NoneNo IPR availableCOILSCoilCoilcoord: 269..289
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 79..108
e-value: 6.7E-4
score: 29.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 79..111
score: 11.808
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 12..248
e-value: 4.0E-9
score: 38.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 21..130
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 79..111
score: 11.771

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1747contigEcto-sp13_S_contig1747:9587..15707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1747.5239.1mRNA_Ecto-sp13_S_contig1747.5239.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1747 9587..15707 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1747.5239.1 ID=prot_Ecto-sp13_S_contig1747.5239.1|Name=mRNA_Ecto-sp13_S_contig1747.5239.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=785bp
MARKKTGSVQGDEGAALEERRRVLFHASSLNRSDIIKKVVSAAVSNNDTT
IGAVAPGSSSSTSGDCVVEPEVLDHVDEHGLTALHHAVKKSSLDAIRVLL
RLGVDVTARGGAQGPFPNLTAYQVALSGGCKGNPEEMKQIFLTEAVQAIA
EGDAERLGEFLDAGVEASSEYGADGSNGEGGSSTSLAEWAEQLGQSDMLT
SLSASLANDNATIRRRDDGEAGNPDAEASARGDTGETAPHGAKEAEAEGS
RVWGDGGRGAAADDVGLFVGELREAIVDLTAESEELEEELAHRGTLGIIK
RARQTRQDLILASSEVDTANALCDKWRAEEDAASEENARLQAQVIEAQLA
VQRHRAGLQGSDGDDSRNSPIARGKETPPPSPARDRPEAQASKASAAGEK
ERIKNNSSSSPRAPPSPKNMTVADGDVRAGEEEGDADLERDDGVGNPGGT
EDSRRTEEAEALGSQLQIIAMHLEDELRMMRSLIDGEGAVGVVRRIRALR
EEIEAAEEVARQTYAVSRYLQARVIVLHEAGNELFAQLDRLNGYLREPPG
AALVANGEPPRAANKEDIDDDDITLERGHYHSGPLPSGNEEENTLELRRS
IDGGEDEVSEENMTHPHAPPDEDSLSPAAEVANEGSAVGSTSSRQEGGGG
GGHEEGGEGEGPVFIRPQELPEAGVFDSDAGEVQPPSPANPVGEESAAAT
EESDTAGSGREGRARALLNARGVETRSRARSAKKVTVVQDVLSVLFGWEV
SSDAERKAARGELEELGSGGNSGGSGGMAGVMFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom