prot_Ecto-sp13_S_contig17468.5237.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17468.5237.1
Unique Nameprot_Ecto-sp13_S_contig17468.5237.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length552
Homology
BLAST of mRNA_Ecto-sp13_S_contig17468.5237.1 vs. uniprot
Match: D7FTS5_ECTSI (Glycos_transf_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS5_ECTSI)

HSP 1 Score: 935 bits (2417), Expect = 0.000e+0
Identity = 511/559 (91.41%), Postives = 521/559 (93.20%), Query Frame = 0
Query:    1 QATGNSFLRATTTCSPELAKEVDFVYGLHPSSATGGCVVQRSFEDDLRASPGVASVNVHVASDPASAKRVFELLRRQGELEEERGEGPPSRVLIIDGIALLFLRDRLHELVEGRGGPWSIVAGFIHCPFSEPFYREEPWLRVALPERMLQDEGGAGIRAEERRLFGLLDKVIAVGAPCRTHLTADYGVREEAIVVVEPTFAPLAPNVAVAAXXXXXXXXXXXIEAGVVPPAASVDISNERPPRFVSVGTLCPRKGQIGLIAALRAACASQPKQLGGSVLTLIGGEGVDPSYAEAVRAAAAVATAGAGDESRGGAKGEGSGRLEVRLLGPLPREETLEHVGASDALLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTLWVGSGRVGRGHDSDGG-------DGVGLASAAEWGQALLRFAHARQRLRIEAERAVPGLAERFCRAVAADTRGQAVRTLIETTTGTRCTRASCSRSHLLGGHELSNGPTDPSTTTTTVVTDQERVRKATVNNALACVCATCVSISGAGGAAAGLAALVAAQCLLLVGLAPPCS 552
            +ATGNSFL ATTTCSPE A EVDFVYGL P SATGGCVVQRSFEDDLRA PGVASVNVHVASDPASAKRVFELLRRQGELEE RG G PSRVLIIDGIALLFLRDRLHELV GRGGPW+IVAGFIHCPFSEPFYREEPWLRVALPERMLQDE GAGIRAEERRLFGLLDKVIAVGAPCRT LTADYGVREEAIVVVEPTF  +APNVAVAA XXXXXXXXXXIEAGVVPPAASVD+SNERPPRFVSVGTLCPRKGQ+GLIAALRAACASQP +LGGSVLTLIGGEG DPSYAEAVRAAAA  TAGAGDESRGGAK EG GRLEVRLLGPLPREETLEHVGASDA LLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAEST+WVGSGR GRG DSDGG       DGVGLASA EWGQALLRFAHARQRLRIEAERAVPGLAERFCRAVAADTRGQAVRTL+ETTTGTRCTRASC RS+LLGG ELSNGPTDPSTTT   VTDQERVR+ATVNNALACVCATCVSISGAGGAA GLAALVAAQCLLLVGLAPPCS
Sbjct:    8 RATGNSFLGATTTCSPEAANEVDFVYGLPPGSATGGCVVQRSFEDDLRAGPGVASVNVHVASDPASAKRVFELLRRQGELEE-RGVGSPSRVLIIDGIALLFLRDRLHELVGGRGGPWNIVAGFIHCPFSEPFYREEPWLRVALPERMLQDESGAGIRAEERRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTAVAPNVAVAASXXXXXXXXXXIEAGVVPPAASVDVSNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPIKLGGSVLTLIGGEGADPSYAEAVRAAAA--TAGAGDESRGGAKVEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGREGRGPDSDGGGGIVAGGDGVGLASATEWGQALLRFAHARQRLRIEAERAVPGLAERFCRAVAADTRGQAVRTLMETTTGTRCTRASCGRSNLLGGFELSNGPTDPSTTTIPAVTDQERVRRATVNNALACVCATCVSISGAGGAAVGLAALVAAQCLLLVGLAPPCS 563          
BLAST of mRNA_Ecto-sp13_S_contig17468.5237.1 vs. uniprot
Match: A0A6H5L2X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2X5_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 3.520e-75
Identity = 118/129 (91.47%), Postives = 122/129 (94.57%), Query Frame = 0
Query:    1 QATGNSFLRATTTCSPELAKEVDFVYGLHPSSATGGCVVQRSFEDDLRASPGVASVNVHVASDPASAKRVFELLRRQGELEEERGEGPPSRVLIIDGIALLFLRDRLHELVEGRGGPWSIVAGFIHCPF 129
            +ATGNSFLRATTTCSPE AKEVDFVYGLHPSSATGGCVVQRSFEDDLRA PGVASVNVHVASD ASAK VF+LLRRQG +EEERG+GPPSR LIIDGIALLFLRDRLHELV GRGGPWSIVAGFIHCPF
Sbjct:    8 RATGNSFLRATTTCSPEAAKEVDFVYGLHPSSATGGCVVQRSFEDDLRADPGVASVNVHVASDAASAKSVFDLLRRQGGVEEERGDGPPSRALIIDGIALLFLRDRLHELVAGRGGPWSIVAGFIHCPF 136          
BLAST of mRNA_Ecto-sp13_S_contig17468.5237.1 vs. uniprot
Match: UPI0007320A72 (glycosyltransferase family 4 protein n=1 Tax=Thiohalocapsa sp. ML1 TaxID=1431688 RepID=UPI0007320A72)

HSP 1 Score: 68.6 bits (166), Expect = 7.900e-9
Identity = 69/215 (32.09%), Postives = 94/215 (43.72%), Query Frame = 0
Query:  223 IEAGVVPPAASVDISNERPPRFVSVGTLCPRKGQIGLIAALRAACASQPKQLGGSVLTLIGGEGVDPSYAEAVRAAAAVATAGAGDESRGGAKGEGSGRLEVRLLGPLPREETLEHVGASDALLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTLWVGSGRVGRGHDS------------DGGDGVGLASAA--EWGQALLRFAHA 423
            +E G  P   ++    + P R V+VGT+ PRKG + LI AL      + + L    L   G    DP+ A A+RA   +   G G+               VRLLG LP      H   +D  +L S  E + +A  EA  RG+PVL T  G +A ++PA++ L V  G V   HD+            D   G   A A   +W  A  RFA A
Sbjct:  152 VEPGTEPAPLAMGSGGDGPLRLVAVGTVTPRKGHLLLIEAL-----GRLRHLDWR-LDCAGSLDRDPTTAAALRAR--IEALGLGER--------------VRLLGELPPAALEPHYARADLFVLASLFEGYGMAYAEALARGLPVLGTTGGAIADTVPADAGLLVPPGDVEALHDALVRLLTDAALRRDLAAGAARARAGLPDWPAAAARFAEA 344          
BLAST of mRNA_Ecto-sp13_S_contig17468.5237.1 vs. uniprot
Match: UPI000DF38905 (glycosyltransferase family 4 protein n=1 Tax=Oleisolibacter albus TaxID=2171757 RepID=UPI000DF38905)

HSP 1 Score: 59.3 bits (142), Expect = 8.670e-6
Identity = 69/202 (34.16%), Postives = 90/202 (44.55%), Query Frame = 0
Query:  242 PRFVSVGTLCPRKGQIGLIAALRAACASQPKQLGGSVLTLIGGEGVDPSYAEAVRAAAAVATAGAGDESRGGAKGEGSGRLEVRLLGPLPREETLEHVGASDALLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTLWVGSGRVG------RGHDSDGGDGVGLASAAEWGQALLR-FAHARQRLRIEAERAVP 436
            P+ +S+GTL PRKG   LI AL AA    P +L      L G +  DP+ A A+RAA     AGAG   R            V + G L          +SD  +  S  E + +A  EA  RG+PV++T  G LA+ +P  +   V  G  G      R   +D G     A AA    ALL  +     R+R E  RAVP
Sbjct:  182 PQLLSLGTLTPRKGHHLLIGAL-AALTDLPWRL-----VLAGSDSRDPACAAALRAA----VAGAGLAGR------------VTITGELDEAGLARLWASSDLFVFPSLHEGYGMAAAEALARGLPVVTTTAGALAEVVPPGAGALVPPGDAGALAAALRPLLADPGVRAAAARAAAAAGALLPDWEDCLDRVRSELGRAVP 361          
BLAST of mRNA_Ecto-sp13_S_contig17468.5237.1 vs. uniprot
Match: A0A1B1UBV1_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium icense TaxID=1274631 RepID=A0A1B1UBV1_9BRAD)

HSP 1 Score: 58.5 bits (140), Expect = 1.440e-5
Identity = 55/159 (34.59%), Postives = 77/159 (48.43%), Query Frame = 0
Query:  230 PAASVDISNERPPRFVSVGTLCPRKGQIGLIAALRAACASQPKQLGGSVLTLIGGEGVDPSYAEAVRAAAAVATAGAGDESRGGAKGEGSGRLEVRLLGPLPREETLEHVGASDALLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTLWV 388
            P  +   SN+   R +S+G++ P KG   LIAAL  A A  P +L     T+ G    DP    A +  A +   G GD               V +LG +P E  +E   ASD  +L S  E + +A  EA   G+PV+STRVG +  ++PAE+ L V
Sbjct:  165 PVPAAPGSNDDVVRLLSIGSVVPDKGYDLLIAAL-IALADLPWRL-----TIAGDRTRDP--VAAAQLDADIQACGLGDR--------------VTVLGAVPVERIIELYLASDIFVLASRFEGYGMALAEAIGHGLPVVSTRVGAIPDTVPAEAGLLV 301          
BLAST of mRNA_Ecto-sp13_S_contig17468.5237.1 vs. uniprot
Match: A0A8I0GPR6_9SPHN (Glycosyltransferase family 4 protein n=1 Tax=Rhizorhabdus sp. TaxID=1968843 RepID=A0A8I0GPR6_9SPHN)

HSP 1 Score: 56.6 bits (135), Expect = 6.990e-5
Identity = 56/168 (33.33%), Postives = 78/168 (46.43%), Query Frame = 0
Query:  243 RFVSVGTLCPRKGQIGLIAALRAACASQPKQLGGSVLTLIGGEGVDPSYAEAVRAAAAVATAGAGDESRGGAKGEGSGRLEVRLLGPLPREETLEHVGASDALLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTLWVGSGRVGRGHDSDGGDGVGLASA 410
            R +SVG LCP+KGQ  + AA+ AA  + P   G SV+ +  GE    S A   R  AA AT G                 +V+LLG     E    +G + ALLL S +E   +  +EA   G PV++TR+  + + L  +S  W+           + GDG  LA A
Sbjct:  223 RLLSVGRLCPQKGQAEIPAAIAAAADTAP---GLSVVLIGDGE----SRAAIEREIAATATGG-----------------KVKLLGWRTNAEVRRRIGETRALLLPSHAEGLPIVIMEAFAMGRPVITTRIAGIPE-LVDDSCGWL----------VEPGDGAALAEA 355          
BLAST of mRNA_Ecto-sp13_S_contig17468.5237.1 vs. uniprot
Match: A0A6M1YBU8_9GAMM (Glycosyltransferase family 4 protein n=2 Tax=Wenzhouxiangella sp. XN24 TaxID=2713569 RepID=A0A6M1YBU8_9GAMM)

HSP 1 Score: 56.2 bits (134), Expect = 7.830e-5
Identity = 87/310 (28.06%), Postives = 118/310 (38.06%), Query Frame = 0
Query:   85 GEGPPSRVLIIDGIALLFLRDRLHELVEGRGGPWSIVAGFIHCPFSEPFYREEPWLRVALPERMLQDEGGAGIRAEERRLFGLLDKVIAVGAPCRTHLTADYGVREEAIVVVEPTFAPLAPNVAVAAXXXXXXXXXXXIEAGVVPPAASVDISNERPPRFVSVGTLCPRKGQIGLIAALRAACASQPKQLGGSVLTLIGGEGVDPSYAEAVRAAAAVATAGAGDESRGGAKGEGSGRLEVRLLGPLPREETLEHVGASDALLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTLWVGSGRVG 394
            G  P    L+IDG+AL  L D     V    G   I A  +H P ++     E  L  A+ ER+L           E R      +VI V +P       + G  +    VVEP         AVAA              G  P         E P R + V +L PRKGQ  L+ AL A  A +         TL+G    DP++AE  R A  V  AG  D               +  +G   +         +   LL S  E + +   EA  RG+P+++T  G LAQ+ P +  L V  G +G
Sbjct:   56 GRLPDGARLVIDGLALGGLPDE----VAAHAGRLDINA-LVHHPLAD-----ETGLDAAVRERLL---------LRETRALAACRRVI-VTSPFTARRLRELGFEQRTPRVVEPGVNGAELAAAVAARLQ-----------GREP---------EGPERLLCVASLTPRKGQDLLVRAL-AQLADRDWHC-----TLLGSSARDPAFAE--RVAGLVREAGLADR--------------IDCIGECDQATLDAEYRRAGVCLLPSHYEGYGMVVSEALARGLPMITTTGGALAQTAPEDCCLRVEPGNIG 303          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17468.5237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FTS5_ECTSI0.000e+091.41Glycos_transf_1 domain-containing protein n=2 Tax=... [more]
A0A6H5L2X5_9PHAE3.520e-7591.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0007320A727.900e-932.09glycosyltransferase family 4 protein n=1 Tax=Thioh... [more]
UPI000DF389058.670e-634.16glycosyltransferase family 4 protein n=1 Tax=Oleis... [more]
A0A1B1UBV1_9BRAD1.440e-534.59Uncharacterized protein n=1 Tax=Bradyrhizobium ice... [more]
A0A8I0GPR6_9SPHN6.990e-533.33Glycosyltransferase family 4 protein n=1 Tax=Rhizo... [more]
A0A6M1YBU8_9GAMM7.830e-528.06Glycosyltransferase family 4 protein n=2 Tax=Wenzh... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001296Glycosyl transferase, family 1PFAMPF00534Glycos_transf_1coord: 237..378
e-value: 1.3E-6
score: 28.0
NoneNo IPR availableGENE3D3.40.50.2000coord: 232..434
e-value: 2.6E-17
score: 65.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..524
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 549..552
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 525..548
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 155..442

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17468contigEcto-sp13_S_contig17468:1514..3679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17468.5237.1mRNA_Ecto-sp13_S_contig17468.5237.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17468 1514..3679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17468.5237.1 ID=prot_Ecto-sp13_S_contig17468.5237.1|Name=mRNA_Ecto-sp13_S_contig17468.5237.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=552bp
QATGNSFLRATTTCSPELAKEVDFVYGLHPSSATGGCVVQRSFEDDLRAS
PGVASVNVHVASDPASAKRVFELLRRQGELEEERGEGPPSRVLIIDGIAL
LFLRDRLHELVEGRGGPWSIVAGFIHCPFSEPFYREEPWLRVALPERMLQ
DEGGAGIRAEERRLFGLLDKVIAVGAPCRTHLTADYGVREEAIVVVEPTF
APLAPNVAVAASASAAAAAAAAIEAGVVPPAASVDISNERPPRFVSVGTL
CPRKGQIGLIAALRAACASQPKQLGGSVLTLIGGEGVDPSYAEAVRAAAA
VATAGAGDESRGGAKGEGSGRLEVRLLGPLPREETLEHVGASDALLLNSC
SESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTLWVGSGRVGRGHDSD
GGDGVGLASAAEWGQALLRFAHARQRLRIEAERAVPGLAERFCRAVAADT
RGQAVRTLIETTTGTRCTRASCSRSHLLGGHELSNGPTDPSTTTTTVVTD
QERVRKATVNNALACVCATCVSISGAGGAAAGLAALVAAQCLLLVGLAPP
CS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001296Glyco_trans_1