prot_Ecto-sp13_S_contig17380.5196.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17380.5196.1
Unique Nameprot_Ecto-sp13_S_contig17380.5196.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length150
Homology
BLAST of mRNA_Ecto-sp13_S_contig17380.5196.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 1.960e-82
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
Query:    1 GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQ 130
            GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQ
Sbjct: 1791 GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQ 1920          
BLAST of mRNA_Ecto-sp13_S_contig17380.5196.1 vs. uniprot
Match: A0A7S3UTV5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTV5_HETAK)

HSP 1 Score: 212 bits (540), Expect = 8.200e-63
Identity = 98/130 (75.38%), Postives = 114/130 (87.69%), Query Frame = 0
Query:    1 GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQ 130
            GVNFPAHLVVVKGTEFFDGK  RYVDFPITD+LQM+GRAGRPQFDD AVA +LVHEPKK F++KFLY PFPVES L   LHNH+SAE AGG+I+S++DAV+YLTWT++F RL+ NP++Y LED S EGVQ
Sbjct:  494 GVNFPAHLVVVKGTEFFDGKQGRYVDFPITDVLQMMGRAGRPQFDDTAVAAVLVHEPKKIFYQKFLYSPFPVESSLREYLHNHISAEVAGGSIKSKQDAVEYLTWTYFFRRLVMNPTYYHLEDPSPEGVQ 623          
BLAST of mRNA_Ecto-sp13_S_contig17380.5196.1 vs. uniprot
Match: A0A7S1CMX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMX3_9STRA)

HSP 1 Score: 196 bits (498), Expect = 4.620e-62
Identity = 93/133 (69.92%), Postives = 111/133 (83.46%), Query Frame = 0
Query:    1 GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPA--SLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQV 131
            GVN PAHLVVVKGTEFFDG+  RYVDF +TD+LQM+GRAGRPQFD   VA ILVHEPKKNF++KFLYEPFPVES+L A  +LH+ L+AE AG AI+SR DA +YLTWT++F RL ANPS+Y  ED S +G++V
Sbjct:    2 GVNLPAHLVVVKGTEFFDGRLGRYVDFAVTDVLQMMGRAGRPQFDTQGVAMILVHEPKKNFYRKFLYEPFPVESQLKAHHALHDALNAEIAGNAIKSRADAAEYLTWTYFFRRLCANPSYYDCEDGSPDGIRV 134          
BLAST of mRNA_Ecto-sp13_S_contig17380.5196.1 vs. uniprot
Match: A0A7S2BB24_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BB24_9STRA)

HSP 1 Score: 207 bits (526), Expect = 6.680e-62
Identity = 92/130 (70.77%), Postives = 113/130 (86.92%), Query Frame = 0
Query:    1 GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQ 130
            GVNFPA LVVVKGTEFFDGKS RYVDFPITD+LQM+GRAGRPQFDD  ++C+ V + KKNF+KKFLYEPFPVES L   LHNH++AE AGG I++++DAV+YLTWT++F RLL NP++Y L ++ST+GVQ
Sbjct:    2 GVNFPARLVVVKGTEFFDGKSGRYVDFPITDVLQMMGRAGRPQFDDKGISCVFVEQSKKNFYKKFLYEPFPVESSLKDVLHNHMNAEVAGGTIKNKQDAVEYLTWTYFFRRLLVNPAYYHLHESSTDGVQ 131          
BLAST of mRNA_Ecto-sp13_S_contig17380.5196.1 vs. uniprot
Match: UPI00053A131A (DExH-box ATP-dependent RNA helicase DExH14-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A131A)

HSP 1 Score: 196 bits (498), Expect = 1.980e-60
Identity = 87/129 (67.44%), Postives = 106/129 (82.17%), Query Frame = 0
Query:    1 GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGV 129
            GVN PAHLV++KGTE+FDGK++RYVDFP+T++LQM+GRAGRPQFD H  A ILVHEPKK+F+KKFLYEPFPVES L   LH+H +AE   G I ++ DAV YLTWT+ F RL+ANP++YGLE T  E V
Sbjct:   19 GVNLPAHLVIIKGTEYFDGKTKRYVDFPLTEILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEKLHDHFNAEIVSGTIGNKEDAVHYLTWTYLFRRLMANPAYYGLEGTQDETV 147          
BLAST of mRNA_Ecto-sp13_S_contig17380.5196.1 vs. uniprot
Match: W7TU71_9STRA (Activating signal cointegrator 1 complex subunit 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU71_9STRA)

HSP 1 Score: 210 bits (534), Expect = 4.300e-60
Identity = 92/130 (70.77%), Postives = 113/130 (86.92%), Query Frame = 0
Query:    1 GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQ 130
            GVNFPAHLVV+KGTE+FDGK+ RYVDFP+TD+LQM+GRAGRPQFD   VACILVHEPKKNF KKFLYEPFPVES L   LHNHL+AE +GG+++++  A++YLTWTF+F RL+ NP++Y LE+T+ E VQ
Sbjct: 1708 GVNFPAHLVVIKGTEYFDGKTSRYVDFPVTDILQMMGRAGRPQFDTRGVACILVHEPKKNFIKKFLYEPFPVESSLKDVLHNHLNAEVSGGSVQNKEQAMEYLTWTFFFRRLVMNPTYYSLEETAPEAVQ 1837          
BLAST of mRNA_Ecto-sp13_S_contig17380.5196.1 vs. uniprot
Match: A0A835Z6M6_9STRA (Sec63 Brl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M6_9STRA)

HSP 1 Score: 209 bits (532), Expect = 7.870e-60
Identity = 97/129 (75.19%), Postives = 112/129 (86.82%), Query Frame = 0
Query:    1 GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGV 129
            GVNFPAHLVVVKGTE+FDG+  RYVDFP+TD+LQMIGRAGRPQFD HAVA ILVHEPKKNF KKFLYEPFPVES+L  +L NH++AE AGGAI SR DA+ Y+TWT+ F R++ NPS+Y LEDT+ EGV
Sbjct: 1024 GVNFPAHLVVVKGTEYFDGRLGRYVDFPVTDVLQMIGRAGRPQFDTHAVAVILVHEPKKNFLKKFLYEPFPVESQLAGALPNHINAEIAGGAIGSREDALAYMTWTYLFRRIVQNPSYYQLEDTTPEGV 1152          
BLAST of mRNA_Ecto-sp13_S_contig17380.5196.1 vs. uniprot
Match: A0A1Y1IBL7_KLENI (DEAD/DEAH box helicase domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBL7_KLENI)

HSP 1 Score: 206 bits (523), Expect = 1.300e-58
Identity = 94/140 (67.14%), Postives = 117/140 (83.57%), Query Frame = 0
Query:    1 GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQVRPPFLAGVL 140
            GVNFPAHLVVVKGTE++DGKS+RYVDFPITD+LQM+GRAGRPQFDDH VA I+VHEPKK+F KKF+Y+PFPVES LP  L +H++AE   G I S +DAVDYLTWTF++ RL+ NPS+YGL +TS + +     FL+G++
Sbjct: 1678 GVNFPAHLVVVKGTEYYDGKSKRYVDFPITDVLQMMGRAGRPQFDDHGVAVIMVHEPKKSFIKKFMYDPFPVESSLPDVLPDHVNAEVVAGTIGSTQDAVDYLTWTFFYRRLVMNPSYYGLAETSADAINA---FLSGLV 1814          
BLAST of mRNA_Ecto-sp13_S_contig17380.5196.1 vs. uniprot
Match: A0A2R6WZK4_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WZK4_MARPO)

HSP 1 Score: 205 bits (522), Expect = 1.760e-58
Identity = 93/129 (72.09%), Postives = 108/129 (83.72%), Query Frame = 0
Query:    1 GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGV 129
            GVN PAHLVV+KGTEFFDGK +RYVDFPITD+LQM+GRAGRPQ+D H  A ILVHEPKK+F+KKFLYEPFPVES L   LHNH +AE   G I S++DAVDYLTWT+ F RL+ NPS+Y LEDTS+E +
Sbjct: 1438 GVNLPAHLVVIKGTEFFDGKQKRYVDFPITDVLQMMGRAGRPQYDQHGKAIILVHEPKKSFYKKFLYEPFPVESSLAQHLHNHFNAEVVSGTIASKQDAVDYLTWTYLFRRLVMNPSYYNLEDTSSETI 1566          
BLAST of mRNA_Ecto-sp13_S_contig17380.5196.1 vs. uniprot
Match: A0A0S4JCP4_BODSA (DEAD/DEAH box RNA helicase, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JCP4_BODSA)

HSP 1 Score: 205 bits (521), Expect = 2.400e-58
Identity = 96/143 (67.13%), Postives = 116/143 (81.12%), Query Frame = 0
Query:    1 GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQVRPPFLAGVLRPV 143
            GVNFPAH+VVVKGTEF+DGK++ YVDFPITD+LQMIGRAGRPQFD+  +A +L HEPKK F++KFLYEPFPVES L   LH H++AE   G I +R+DAVDYLTWTF F RL+ NPSFYGLED S + V V   FL+G++R +
Sbjct: 1510 GVNFPAHMVVVKGTEFYDGKTKTYVDFPITDVLQMIGRAGRPQFDNEGIAQVLCHEPKKGFYRKFLYEPFPVESALHKQLHVHMNAEIVSGTISTRQDAVDYLTWTFLFRRLVKNPSFYGLEDRSPKAVTV---FLSGLVRKI 1649          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17380.5196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN81_ECTSI1.960e-82100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3UTV5_HETAK8.200e-6375.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1CMX3_9STRA4.620e-6269.92Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2BB24_9STRA6.680e-6270.77Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
UPI00053A131A1.980e-6067.44DExH-box ATP-dependent RNA helicase DExH14-like n=... [more]
W7TU71_9STRA4.300e-6070.77Activating signal cointegrator 1 complex subunit 3... [more]
A0A835Z6M6_9STRA7.870e-6075.19Sec63 Brl domain-containing protein n=1 Tax=Tribon... [more]
A0A1Y1IBL7_KLENI1.300e-5867.14DEAD/DEAH box helicase domain containing protein n... [more]
A0A2R6WZK4_MARPO1.760e-5872.09Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A0S4JCP4_BODSA2.400e-5867.13DEAD/DEAH box RNA helicase, putative n=1 Tax=Bodo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..73
e-value: 4.5E-27
score: 96.7
NoneNo IPR availableGENE3D1.10.10.2530coord: 74..141
e-value: 1.2E-19
score: 72.1
NoneNo IPR availablePANTHERPTHR24075FAMILY NOT NAMEDcoord: 1..130
NoneNo IPR availablePANTHERPTHR24075:SF6ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3coord: 1..130
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17380contigEcto-sp13_S_contig17380:1776..3676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17380.5196.1mRNA_Ecto-sp13_S_contig17380.5196.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17380 1776..3676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17380.5196.1 ID=prot_Ecto-sp13_S_contig17380.5196.1|Name=mRNA_Ecto-sp13_S_contig17380.5196.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=150bp
GVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQMIGRAGRPQFDDHAVA
CILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAV
DYLTWTFYFVRLLANPSFYGLEDTSTEGVQVRPPFLAGVLRPVFRLYTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase