prot_Ecto-sp13_S_contig17372.5189.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17372.5189.1
Unique Nameprot_Ecto-sp13_S_contig17372.5189.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length243
Homology
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: D7FS57_ECTSI (Chloride channel protein EriC n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS57_ECTSI)

HSP 1 Score: 452 bits (1162), Expect = 1.430e-150
Identity = 239/243 (98.35%), Postives = 240/243 (98.77%), Query Frame = 0
Query:    1 SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADAPAVQPMPRDMSLEIGLKISGKVDKLMGKIQVG 243
            SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSL AASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVE+FSRADAPAVQPMPRDMSLEIGLKISGK DKLMGKIQ G
Sbjct:  381 SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLDAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVEVFSRADAPAVQPMPRDMSLEIGLKISGKADKLMGKIQGG 623          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A836C8J5_9STRA (Chloride channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J5_9STRA)

HSP 1 Score: 211 bits (538), Expect = 7.660e-60
Identity = 121/218 (55.50%), Postives = 154/218 (70.64%), Query Frame = 0
Query:    1 SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFS-RADAPAVQPM 217
            S DVF+G   GF +M   P+W+KP++ AA+TG +G+ FPQ+LFFGY TLD LLANTG Y    L  LCV KA++TA   GSGLVGGTFAP+LFLGATAGA YQR +   L+A          +A+ FL          G G  ++ LL +A  PAY+MVGAA+VL+A+YRAPLT SLLLFELT+DYDIVLPLMA+AGV+SL+V+L   R++ P  +P+
Sbjct:  408 SKDVFQGKQAGFKFMSDVPEWTKPLIGAALTGAIGIVFPQILFFGYQTLDTLLANTGRYGALQLARLCVVKAVMTAVCFGSGLVGGTFAPALFLGATAGACYQRGVVNLLSAL---------SANPFLFH-------NGGGAFVNGLLNVAAGPAYSMVGAASVLAAVYRAPLTSSLLLFELTRDYDIVLPLMASAGVASLLVQLVQDRSEQPRQEPV 609          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A836CI00_9STRA (Chloride channel (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI00_9STRA)

HSP 1 Score: 189 bits (481), Expect = 5.880e-53
Identity = 115/211 (54.50%), Postives = 135/211 (63.98%), Query Frame = 0
Query:    1 SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADA 211
            S DVF G   GF +M+  P   KP++ AA TG VG++FPQ+LFFGY+TL  LLANTG Y    L  LC+ KA  TA   GSGLVGGTFAPSLFLGATAGA YQR +   L A  STA                                +A +PAY+MVGAA+VL+A+YRAPLT SLLLFELT+DYDIVLPLMA+AGV+SL+VEL     A
Sbjct:  253 SKDVFDGTQLGFAFMRDVPAGVKPLIGAAFTGFVGLWFPQILFFGYETLTSLLANTGRYGTLQLLQLCILKAATTAACFGSGLVGGTFAPSLFLGATAGAFYQRGVVMLLAAVSSTA----------------------------HFAQVAAAPAYSMVGAASVLAAVYRAPLTSSLLLFELTRDYDIVLPLMASAGVASLLVELVQSRSA 435          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A4D9CYP4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYP4_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.860e-44
Identity = 103/200 (51.50%), Postives = 132/200 (66.00%), Query Frame = 0
Query:    9 FPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSR 208
            +P + +M + P+  KP++  A+ G  G+ FPQ+LFFGY+TLD L+AN  SY   LL  L   KA +TA  L SGLVGG FAPSLFLGATAGAAYQ++L   L A                             G  ++++ IAG PAYAMVGAA+VL++++RAPLTGSLLLFELT+DYDI+LPLMA+AG+ SL+VEL  R
Sbjct:  261 WPAWNFMGRVPRAFKPMLGGALCGLTGILFPQILFFGYETLDGLIANQ-SYPALLLLGLLALKAGMTALCLASGLVGGLFAPSLFLGATAGAAYQKLLNLFLQA----------------------------SGLAATVIPIAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVER 431          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A7S1UR58_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UR58_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.460e-43
Identity = 100/202 (49.50%), Postives = 129/202 (63.86%), Query Frame = 0
Query:   14 WMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADAPAVQ 215
            +M+     +KP++   + G +G+ FPQ+LFFGYDTL+ LLANT S S PLL  L   K   TA + GSGLVGGTFAPSLFLGA  GA++  ++   L    +  G   +A +T +L         G  G       +A  PAYAMVGAA+VL+AL+RAPLT SLLLFELT+DYD++LPLMA+AGV SLV +L   A   A +
Sbjct:  116 YMRDLRPEAKPVIGGLLCGLIGLAFPQILFFGYDTLNGLLANT-SQSTPLLLSLLFVKLGTTALSAGSGLVGGTFAPSLFLGAMLGASFHNVMSWLL---HTAVGHGTSATTTLML---------GAAGSFQ----LADMPAYAMVGAASVLAALFRAPLTASLLLFELTRDYDVILPLMASAGVGSLVSDLVEEASVSAAE 300          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A7S1GKF0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKF0_CYCTE)

HSP 1 Score: 154 bits (388), Expect = 6.020e-43
Identity = 101/212 (47.64%), Postives = 130/212 (61.32%), Query Frame = 0
Query:    1 SADVFKGNFPGF-------GWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVEL 205
            +A +F+  F G         W  K P   KP++   + G VG+ FPQ+LFFGY+TL+ LLANT   +   L  L V K L TA + GSGLVGGTFAPSLFLG   GA++  ++ G L ++    G   AAA+T L  +  V                   PAYAMVGAA+VL+AL+RAPLT SLLLFELT+DYD++LPLMA+AGV SLV ++
Sbjct:    3 TAQLFQSLFEGSLGPNRVRNWFSKIPSAGKPVLGGLLCGLVGLGFPQILFFGYETLNGLLANTSLPTATSLSLL-VVKTLTTALSAGSGLVGGTFAPSLFLGGMLGASFHNVMAG-LFSYAQAHG---AAAATPLFQLADV-------------------PAYAMVGAASVLAALFRAPLTASLLLFELTRDYDVILPLMASAGVGSLVGDI 190          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: M2W5F5_GALSU (Chloride channel/carrier, CIC family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W5F5_GALSU)

HSP 1 Score: 163 bits (412), Expect = 1.390e-42
Identity = 100/207 (48.31%), Postives = 133/207 (64.25%), Query Frame = 0
Query:    2 ADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQ----GCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVE 204
            ++ F+G      WMK  P  +KP +   + G + +FFPQ+LFFGYDTLD LLA++  + L LL  L   K ++T+ +LGSGLVGGTFAP+LF+GAT GA Y ++L     G L     + G  L++                    +SS+L IAG PAY+MVG AAVLS ++RAPLT SLLLFELT+DY IVLPLMA++G+SS +VE
Sbjct:  348 SNFFQGKLSISEWMKAVPTVTKPFLGGLLNGLIALFFPQILFFGYDTLDALLADS-DFPLQLLFTLLFLKPIVTSLSLGSGLVGGTFAPTLFVGATLGACYAKLLAQIDYGILHVMNQSFGSWLSSG-------------------MSSILLIAGPPAYSMVGMAAVLSGVFRAPLTSSLLLFELTRDYRIVLPLMASSGLSSWLVE 534          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A7S3XXN0_HETAK (Chloride channel protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXN0_HETAK)

HSP 1 Score: 162 bits (409), Expect = 1.630e-42
Identity = 108/209 (51.67%), Postives = 131/209 (62.68%), Query Frame = 0
Query:    1 SADVFKG----NFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTG-SYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVE 204
            +A+ FK     N PG       P+   P++       + + FPQ+LFFGYDTLDKLLANT  SYS   L    V K + T+  LGSGLVGGTFAP+LFLGAT GA Y  ++ G                  FL  +TS L L  P       L IA +PAYAMVGA+AVLSAL+RAPLTGSLL+FELT+DYDI+LPLMAAAG++SLVV+
Sbjct:   51 TAEAFKKLSDKNSPG----PYVPKHLTPLIGGLFCSLLSLDFPQILFFGYDTLDKLLANTVLSYSTTDLALFVVLKMVATSVCLGSGLVGGTFAPALFLGATTGAVYHNVVAG------------------FLETLTSTLSLSKP-------LIIAYAPAYAMVGASAVLSALFRAPLTGSLLMFELTRDYDIILPLMAAAGIASLVVD 230          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A7S0LY74_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LY74_9CRYP)

HSP 1 Score: 151 bits (382), Expect = 2.670e-40
Identity = 96/207 (46.38%), Postives = 121/207 (58.45%), Query Frame = 0
Query:    5 FKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADA 211
            + G  PGF +M   P+  +P++ A + G V   FPQVLFFGY+TL  +L N   YS   L  L   K +LTA +LGSGLVGG FAPSLFLG+T GAAY  +L                             GLG           IAG+ +YAMVGAAAVL+A +RAP+TG LLLFELT+DYDIVLPLMA+ G+ ++ ++L   A A
Sbjct:  177 YAGRIPGFEFMAAIPKEVRPMVGALLCGIVAARFPQVLFFGYETLGSILKNAEGYSPESLLTLMSLKLVLTASSLGSGLVGGIFAPSLFLGSTLGAAYGNLLHSA--------------------------GLG-----------IAGASSYAMVGAAAVLAATFRAPITGILLLFELTRDYDIVLPLMASVGIGTVTIDLLEPAYA 346          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A7S0ZAY3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAY3_9RHOD)

HSP 1 Score: 147 bits (372), Expect = 4.920e-40
Identity = 103/255 (40.39%), Postives = 144/255 (56.47%), Query Frame = 0
Query:    7 GNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQ----GCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADAPAVQ---PMPRDMS--------------LEIGLKISGKVDKLMGKI 240
            G  PG   ++K P + KP +     G V V++PQ+LFFGYDTLD LLA+   + L LL  L + K ++TA +LGSGL+GGTFAP++FLGAT GA+Y ++L+       +     AGP + +A                   +    +IAG PAY++VG AA L+A +RAPLT  LL+FELT+DY I+LPLMA+ G SS +VE    A  PAV    P  R+ S              LE G+++  + D  + +I
Sbjct:   29 GEAPG---LRKVPAFFKPAIGGVACGIVAVYYPQILFFGYDTLDALLADV-QFPLGLLLTLLLLKPVMTAISLGSGLIGGTFAPTMFLGATLGASYNKLLETGYENAASILYKNAGPDMTSA-------------------VIESFSIAGPPAYSIVGMAAALAAGFRAPLTAFLLMFELTRDYRIILPLMASVGFSSWLVERVE-ARTPAVATSVPPARETSSRSDDKTSVSESSALEYGVRVDAETDAELQQI 259          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS57_ECTSI1.430e-15098.35Chloride channel protein EriC n=2 Tax=Ectocarpus T... [more]
A0A836C8J5_9STRA7.660e-6055.50Chloride channel n=1 Tax=Tribonema minus TaxID=303... [more]
A0A836CI00_9STRA5.880e-5354.50Chloride channel (Fragment) n=1 Tax=Tribonema minu... [more]
A0A4D9CYP4_9STRA2.860e-4451.50Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1UR58_9STRA3.460e-4349.50Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1GKF0_CYCTE6.020e-4347.64Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
M2W5F5_GALSU1.390e-4248.31Chloride channel/carrier, CIC family n=1 Tax=Galdi... [more]
A0A7S3XXN0_HETAK1.630e-4251.67Chloride channel protein n=2 Tax=Heterosigma akash... [more]
A0A7S0LY74_9CRYP2.670e-4046.38Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0ZAY3_9RHOD4.920e-4040.39Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001807Chloride channel, voltage gatedPFAMPF00654Voltage_CLCcoord: 17..204
e-value: 6.2E-29
score: 101.3
NoneNo IPR availablePANTHERPTHR43427FAMILY NOT NAMEDcoord: 12..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 138..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..207
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 208..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 25..44
NoneNo IPR availableTMHMMTMhelixcoord: 147..169
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 83..102
IPR014743Chloride channel, coreSUPERFAMILY81340Clc chloride channelcoord: 14..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17372contigEcto-sp13_S_contig17372:219..3568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17372.5189.1mRNA_Ecto-sp13_S_contig17372.5189.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17372 219..3568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17372.5189.1 ID=prot_Ecto-sp13_S_contig17372.5189.1|Name=mRNA_Ecto-sp13_S_contig17372.5189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp
SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLD
KLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGA
AYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTI
AGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSS
LVVELFSRADAPAVQPMPRDMSLEIGLKISGKVDKLMGKIQVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001807Cl-channel_volt-gated
IPR014743Cl-channel_core