mRNA_Ecto-sp13_S_contig17372.5189.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17372.5189.1
Unique NamemRNA_Ecto-sp13_S_contig17372.5189.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: D7FS57_ECTSI (Chloride channel protein EriC n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS57_ECTSI)

HSP 1 Score: 452 bits (1162), Expect = 1.430e-150
Identity = 239/243 (98.35%), Postives = 240/243 (98.77%), Query Frame = 1
Query:    1 SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADAPAVQPMPRDMSLEIGLKISGKVDKLMGKIQVG 729
            SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSL AASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVE+FSRADAPAVQPMPRDMSLEIGLKISGK DKLMGKIQ G
Sbjct:  381 SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLDAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVEVFSRADAPAVQPMPRDMSLEIGLKISGKADKLMGKIQGG 623          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A836C8J5_9STRA (Chloride channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J5_9STRA)

HSP 1 Score: 211 bits (538), Expect = 7.660e-60
Identity = 121/218 (55.50%), Postives = 154/218 (70.64%), Query Frame = 1
Query:    1 SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFS-RADAPAVQPM 651
            S DVF+G   GF +M   P+W+KP++ AA+TG +G+ FPQ+LFFGY TLD LLANTG Y    L  LCV KA++TA   GSGLVGGTFAP+LFLGATAGA YQR +   L+A          +A+ FL          G G  ++ LL +A  PAY+MVGAA+VL+A+YRAPLT SLLLFELT+DYDIVLPLMA+AGV+SL+V+L   R++ P  +P+
Sbjct:  408 SKDVFQGKQAGFKFMSDVPEWTKPLIGAALTGAIGIVFPQILFFGYQTLDTLLANTGRYGALQLARLCVVKAVMTAVCFGSGLVGGTFAPALFLGATAGACYQRGVVNLLSAL---------SANPFLFH-------NGGGAFVNGLLNVAAGPAYSMVGAASVLAAVYRAPLTSSLLLFELTRDYDIVLPLMASAGVASLLVQLVQDRSEQPRQEPV 609          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A836CI00_9STRA (Chloride channel (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI00_9STRA)

HSP 1 Score: 189 bits (481), Expect = 5.880e-53
Identity = 115/211 (54.50%), Postives = 135/211 (63.98%), Query Frame = 1
Query:    1 SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADA 633
            S DVF G   GF +M+  P   KP++ AA TG VG++FPQ+LFFGY+TL  LLANTG Y    L  LC+ KA  TA   GSGLVGGTFAPSLFLGATAGA YQR +   L A  STA                                +A +PAY+MVGAA+VL+A+YRAPLT SLLLFELT+DYDIVLPLMA+AGV+SL+VEL     A
Sbjct:  253 SKDVFDGTQLGFAFMRDVPAGVKPLIGAAFTGFVGLWFPQILFFGYETLTSLLANTGRYGTLQLLQLCILKAATTAACFGSGLVGGTFAPSLFLGATAGAFYQRGVVMLLAAVSSTA----------------------------HFAQVAAAPAYSMVGAASVLAAVYRAPLTSSLLLFELTRDYDIVLPLMASAGVASLLVELVQSRSA 435          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A4D9CYP4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYP4_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.860e-44
Identity = 103/200 (51.50%), Postives = 132/200 (66.00%), Query Frame = 1
Query:   25 FPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSR 624
            +P + +M + P+  KP++  A+ G  G+ FPQ+LFFGY+TLD L+AN  SY   LL  L   KA +TA  L SGLVGG FAPSLFLGATAGAAYQ++L   L A                             G  ++++ IAG PAYAMVGAA+VL++++RAPLTGSLLLFELT+DYDI+LPLMA+AG+ SL+VEL  R
Sbjct:  261 WPAWNFMGRVPRAFKPMLGGALCGLTGILFPQILFFGYETLDGLIANQ-SYPALLLLGLLALKAGMTALCLASGLVGGLFAPSLFLGATAGAAYQKLLNLFLQA----------------------------SGLAATVIPIAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVER 431          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A7S1UR58_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UR58_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.460e-43
Identity = 100/202 (49.50%), Postives = 129/202 (63.86%), Query Frame = 1
Query:   40 WMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADAPAVQ 645
            +M+     +KP++   + G +G+ FPQ+LFFGYDTL+ LLANT S S PLL  L   K   TA + GSGLVGGTFAPSLFLGA  GA++  ++   L    +  G   +A +T +L         G  G       +A  PAYAMVGAA+VL+AL+RAPLT SLLLFELT+DYD++LPLMA+AGV SLV +L   A   A +
Sbjct:  116 YMRDLRPEAKPVIGGLLCGLIGLAFPQILFFGYDTLNGLLANT-SQSTPLLLSLLFVKLGTTALSAGSGLVGGTFAPSLFLGAMLGASFHNVMSWLL---HTAVGHGTSATTTLML---------GAAGSFQ----LADMPAYAMVGAASVLAALFRAPLTASLLLFELTRDYDVILPLMASAGVGSLVSDLVEEASVSAAE 300          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A7S1GKF0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKF0_CYCTE)

HSP 1 Score: 154 bits (388), Expect = 6.020e-43
Identity = 101/212 (47.64%), Postives = 130/212 (61.32%), Query Frame = 1
Query:    1 SADVFKGNFPGF-------GWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVEL 615
            +A +F+  F G         W  K P   KP++   + G VG+ FPQ+LFFGY+TL+ LLANT   +   L  L V K L TA + GSGLVGGTFAPSLFLG   GA++  ++ G L ++    G   AAA+T L  +  V                   PAYAMVGAA+VL+AL+RAPLT SLLLFELT+DYD++LPLMA+AGV SLV ++
Sbjct:    3 TAQLFQSLFEGSLGPNRVRNWFSKIPSAGKPVLGGLLCGLVGLGFPQILFFGYETLNGLLANTSLPTATSLSLL-VVKTLTTALSAGSGLVGGTFAPSLFLGGMLGASFHNVMAG-LFSYAQAHG---AAAATPLFQLADV-------------------PAYAMVGAASVLAALFRAPLTASLLLFELTRDYDVILPLMASAGVGSLVGDI 190          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: M2W5F5_GALSU (Chloride channel/carrier, CIC family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W5F5_GALSU)

HSP 1 Score: 163 bits (412), Expect = 1.390e-42
Identity = 100/207 (48.31%), Postives = 133/207 (64.25%), Query Frame = 1
Query:    4 ADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQ----GCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVE 612
            ++ F+G      WMK  P  +KP +   + G + +FFPQ+LFFGYDTLD LLA++  + L LL  L   K ++T+ +LGSGLVGGTFAP+LF+GAT GA Y ++L     G L     + G  L++                    +SS+L IAG PAY+MVG AAVLS ++RAPLT SLLLFELT+DY IVLPLMA++G+SS +VE
Sbjct:  348 SNFFQGKLSISEWMKAVPTVTKPFLGGLLNGLIALFFPQILFFGYDTLDALLADS-DFPLQLLFTLLFLKPIVTSLSLGSGLVGGTFAPTLFVGATLGACYAKLLAQIDYGILHVMNQSFGSWLSSG-------------------MSSILLIAGPPAYSMVGMAAVLSGVFRAPLTSSLLLFELTRDYRIVLPLMASSGLSSWLVE 534          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A7S3XXN0_HETAK (Chloride channel protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXN0_HETAK)

HSP 1 Score: 162 bits (409), Expect = 1.630e-42
Identity = 108/209 (51.67%), Postives = 131/209 (62.68%), Query Frame = 1
Query:    1 SADVFKG----NFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTG-SYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVE 612
            +A+ FK     N PG       P+   P++       + + FPQ+LFFGYDTLDKLLANT  SYS   L    V K + T+  LGSGLVGGTFAP+LFLGAT GA Y  ++ G                  FL  +TS L L  P       L IA +PAYAMVGA+AVLSAL+RAPLTGSLL+FELT+DYDI+LPLMAAAG++SLVV+
Sbjct:   51 TAEAFKKLSDKNSPG----PYVPKHLTPLIGGLFCSLLSLDFPQILFFGYDTLDKLLANTVLSYSTTDLALFVVLKMVATSVCLGSGLVGGTFAPALFLGATTGAVYHNVVAG------------------FLETLTSTLSLSKP-------LIIAYAPAYAMVGASAVLSALFRAPLTGSLLMFELTRDYDIILPLMAAAGIASLVVD 230          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A7S0LY74_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LY74_9CRYP)

HSP 1 Score: 151 bits (382), Expect = 2.670e-40
Identity = 96/207 (46.38%), Postives = 121/207 (58.45%), Query Frame = 1
Query:   13 FKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADA 633
            + G  PGF +M   P+  +P++ A + G V   FPQVLFFGY+TL  +L N   YS   L  L   K +LTA +LGSGLVGG FAPSLFLG+T GAAY  +L                             GLG           IAG+ +YAMVGAAAVL+A +RAP+TG LLLFELT+DYDIVLPLMA+ G+ ++ ++L   A A
Sbjct:  177 YAGRIPGFEFMAAIPKEVRPMVGALLCGIVAARFPQVLFFGYETLGSILKNAEGYSPESLLTLMSLKLVLTASSLGSGLVGGIFAPSLFLGSTLGAAYGNLLHSA--------------------------GLG-----------IAGASSYAMVGAAAVLAATFRAPITGILLLFELTRDYDIVLPLMASVGIGTVTIDLLEPAYA 346          
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Match: A0A7S0ZAY3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAY3_9RHOD)

HSP 1 Score: 147 bits (372), Expect = 4.920e-40
Identity = 103/255 (40.39%), Postives = 144/255 (56.47%), Query Frame = 1
Query:   19 GNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQ----GCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADAPAVQ---PMPRDMS--------------LEIGLKISGKVDKLMGKI 720
            G  PG   ++K P + KP +     G V V++PQ+LFFGYDTLD LLA+   + L LL  L + K ++TA +LGSGL+GGTFAP++FLGAT GA+Y ++L+       +     AGP + +A                   +    +IAG PAY++VG AA L+A +RAPLT  LL+FELT+DY I+LPLMA+ G SS +VE    A  PAV    P  R+ S              LE G+++  + D  + +I
Sbjct:   29 GEAPG---LRKVPAFFKPAIGGVACGIVAVYYPQILFFGYDTLDALLADV-QFPLGLLLTLLLLKPVMTAISLGSGLIGGTFAPTMFLGATLGASYNKLLETGYENAASILYKNAGPDMTSA-------------------VIESFSIAGPPAYSIVGMAAALAAGFRAPLTAFLLMFELTRDYRIILPLMASVGFSSWLVERVE-ARTPAVATSVPPARETSSRSDDKTSVSESSALEYGVRVDAETDAELQQI 259          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17372.5189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS57_ECTSI1.430e-15098.35Chloride channel protein EriC n=2 Tax=Ectocarpus T... [more]
A0A836C8J5_9STRA7.660e-6055.50Chloride channel n=1 Tax=Tribonema minus TaxID=303... [more]
A0A836CI00_9STRA5.880e-5354.50Chloride channel (Fragment) n=1 Tax=Tribonema minu... [more]
A0A4D9CYP4_9STRA2.860e-4451.50Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1UR58_9STRA3.460e-4349.50Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1GKF0_CYCTE6.020e-4347.64Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
M2W5F5_GALSU1.390e-4248.31Chloride channel/carrier, CIC family n=1 Tax=Galdi... [more]
A0A7S3XXN0_HETAK1.630e-4251.67Chloride channel protein n=2 Tax=Heterosigma akash... [more]
A0A7S0LY74_9CRYP2.670e-4046.38Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0ZAY3_9RHOD4.920e-4040.39Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17372contigEcto-sp13_S_contig17372:219..3568 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score453.0
Seed ortholog evalue8.9e-125
Seed eggNOG ortholog2880.D7FS57
Model size729
KEGG rclassRC00311,RC00313
KEGG koko:K01637
KEGG ReactionR00479
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200
KEGG ModuleM00012
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.voltage-gated chloride channel activity
EggNOG OGsCOG0038@1,KOG0475@2759
EC4.1.3.1
Cds size729
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462906.3553963-CDS-Ecto-sp13_S_contig17372:218..3381681462906.3553963-CDS-Ecto-sp13_S_contig17372:218..338Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17372 219..338 +
1681462906.366185-CDS-Ecto-sp13_S_contig17372:1064..11571681462906.366185-CDS-Ecto-sp13_S_contig17372:1064..1157Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17372 1065..1157 +
1681462906.3747923-CDS-Ecto-sp13_S_contig17372:1820..19281681462906.3747923-CDS-Ecto-sp13_S_contig17372:1820..1928Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17372 1821..1928 +
1681462906.385203-CDS-Ecto-sp13_S_contig17372:2705..29361681462906.385203-CDS-Ecto-sp13_S_contig17372:2705..2936Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17372 2706..2936 +
1681462906.3936498-CDS-Ecto-sp13_S_contig17372:3391..35681681462906.3936498-CDS-Ecto-sp13_S_contig17372:3391..3568Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17372 3392..3568 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17372.5189.1prot_Ecto-sp13_S_contig17372.5189.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17372 219..3568 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17372.5189.1

>prot_Ecto-sp13_S_contig17372.5189.1 ID=prot_Ecto-sp13_S_contig17372.5189.1|Name=mRNA_Ecto-sp13_S_contig17372.5189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp
SADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLD
KLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGA
AYQRILQGCLTAFRSTAGPSLAAASTFLLPVTSVLGLGGPGGDLSSLLTI
AGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSS
LVVELFSRADAPAVQPMPRDMSLEIGLKISGKVDKLMGKIQVG
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mRNA from alignment at Ecto-sp13_S_contig17372:219..3568+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17372.5189.1 ID=mRNA_Ecto-sp13_S_contig17372.5189.1|Name=mRNA_Ecto-sp13_S_contig17372.5189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3350bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17372:219..3568+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCGCTGACGTGTTTAAGGGAAATTTCCCGGGTTTTGGGTGGATGAAGAA GGCCCCGCAGTGGTCGAAGCCGATCATGATGGCGGCCGTTACCGGAACGG TCGGCGTGTTCTTCCCGCAGGTGCTTTGGTGCTTACGGCCGGAGGGAAGG GGGTAGCAAGGAGTGTTGGTTGTTCATCATACAGAGTGGTAGCGTTGACG GCTGTAGTGGGCTGCTTCTTTCATTGGTTTGCTTGGTTCTTTTTCATCAC AAGCGTGAGAAGCAAGAGGGATCGTTCGCTGTTGGGCCTGATGCGTGTGT TTGTACTTTTTGTCTTCTTCAATCGAAGCGTATTTTTACTTCGGAATGCG TATTTTCTTTCTACATGAGGCCTGAATCCAAAGAAGGGGGCCGATCTTTT GCTAATTACCCATTGGGTTGTCTGCCAAACAAAGTGATCTCTCGACGCGC GAAATGTAGGAGAAACTCAACAATGTTTTTTTTCCTCGTCTACCAAAAAT GGGGGGACTGCTATCGCCATAATGAATAAAACGAAAACACGCAACACAAA ATATTATTATTCGGCGCAGAGAACGCCTAGCGCGAAGCAGCCGCTCGACG TGCAGGCTCCAATCCCGCGTGTTGCTGCGATAGTGGGACACGTACTTGCC GCGACCTGCGGCGGTGGTGCTATCTTGGATCTAGTCTCACGCTTCCATGC CATACCACGCTCTTTTGACCTTAGCACTGGCCTGCTTTTATGGCCTGAAG CTTGCAATAAGGACCCCTCTTTTGCTGGTCTGCTTTTACGGCCTGAAGAT TTGCAATGATGGCCCCCTGTTTCGCGGCCTTCGTCCCCACGTTCAGGTGT TATTCTTCGGGTACGACACTCTCGACAAGCTCCTCGCTAATACCGGGTCT TACAGCTTGCCTCTGCTTTGCTTTTTGTGCGTGGCGAAGGTGAGGCTTTT GTGGCTTTTGTGGGTGTCGTCGTCGGCGATGGTCCTGGCCGTGGTGGGGG TGTGGATCATGATGTCGGTTCGTTGTTGCTGATTGTTGTTGTTGCTGATT GTTGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTACTGC TGCTGCTGCTGCTGCTACTGCTACTGCTGCTACTGCTGTTACTGCTGTTG CTGTTGCTGTTGCTGTCATCCTTGTTGACGCTTTGCTGGTGGTGTTGCGG CCATGGCGCTCGGCACCTGATCCATCAGCAGGTGCCATGTTGGTCTTGTC TTGTTTGATGTTGATGCGGAGAGGTGCCGCGTTTTCTCAGAGGCCGATGA CAAAGGCACGCCAAAACCTCTCTTTTGTTTGTACACGTGTGCACGTGATT CGGCCTCCTATACGGCAAAAGCTAGACTTAACGCCCTCGACTCTAACACG AGTGTGCTTTTAGGGAGCGCGCACACCGCGGTTTCGTGTACACGACCTGT TCAATACATCTCGCACGCTTCAAACATGAGACACACAAGACGATCTGAAC CTCGATCTCACGTGCCACCCTTACGTGGTCGAGGGTGACTGCCCCACCTC CCGCAACTGACATCATCCGCATGACTCTTCTCGATGTTGTTGGTGCGTGC AGGCTCTGCTGACGGCAGGTGCCTTAGGCTCGGGCCTCGTCGGCGGAACT TTCGCCCCTTCGCTGTTCCTAGGGGCGACGGCGGGCGCGGCTTACCAGCG GATACTCCAGGTGGGGTAGGCAGTGTCCCGCCAGACCTAAACTCCTTCCA TTCGGTTTGTCTTGTGTGCGTGTTGCTGCTCGTTGTATTGGCGCCCCCTT CCTTCCCTTCCTTTACCGCCCACCGCAGTGGGTTCCGCCCACCGCAGTGG GTTCCGGAAAGAAATCCGTAGCGTTGTTGATGCTGTTGCTCTCGCAGCTG TTTGTAGAAGGCAGGCGAAAGTGTGCCATCTACGATTGGGTTGGTCACGT TCCTGGCCGAACGGCATGAGGACGCGGGCGCGGTTGGTGGGCTGTAGACT GTAGGGGGCTTTGGCTTGTTGCCGGTGCCGGCGCTTCTCAAACGCGAACG CATCAATTTTCTTTCAATTTCCAACTCCACCCCTGCCCCCCCCCCAAATC GTCAGGAGAAAGAATGGTTCTGCCCGTCTGGAGTGATGTGCACTCATGAC CGGCGGTCGCCTTCTTGAAGATCTTAGTGCTTGGGCACGCCCGTTCCACG TCTGCCGTCACTCTAGTATATAACATAAAGTTAGCAAATCATTAAAGAAA AACTTAATGCTCAGCGTGAAATAACACGATATGAGGCGGAGACTACAAAA AGATGAAATGTTAGCCTTAAACGAAGAATGTATGTCCAATACACAAGAAC CCAACGTCATTGGTGAAGATTTTTAATTTAACGTAACTGTCCCGACGACT ACGGCTCGCACACATGGCCAAAACTTGACACAGCATATCCTACCCCCCCC CTCAAACAACCGATCGGCGGCGCCCCCCCCCCCACAGGGCTGTTTGACGG CGTTCCGATCCACCGCTGGGCCATCCCTGGCTGCCGCGAGCACCTTCCTG CTGCCGGTGACATCGGTCCTCGGCCTAGGGGGCCCCGGTGGTGACCTGAG CTCACTGCTGACTATCGCGGGGTCGCCGGCTTACGCCATGGTCGGTGCGG CTGCAGTGCTCTCGGCGCTGTACCGCGCGCCGCTGACGGGGTCGCTTCTC CTGTTTGAGCTGACGAAGGTGGGGGACCCCGTGCGTGTTGGTGATGTGGG GGGCTACCATCGTGTTTTTTTTTGTCGGTTTCGGGAGTAGGGCGGGGGAT ACGTGTATGCGACGACCGCGTGGGTTCGTATGATGAATGTGCGATCCTCT GCCGTGTTGCAGCTGCACCAGTTAGTGGCCGGCCTGCGCCTGTTATACTT TTTTTTGGCGCGTGCTAGCTTTTGCCAGTCGAGGAGCTTCATAAAGCCCG GTGCCCATTAGAAGCCGGGTGGACACGAATTTGAGCCTTTTCGAGTCTGT GTCGGCACCACTTTTCGGCTCTACACACTAGAACAGAGCCGACATGGGTG TAGATTTCACACGTTCAAGGATACCGTTTCACTTGCTCGCTTGGCCTTTG ACATCATGCTGCCGCCTAGACTTGTAATATGAAAGCCGCCTCTTTTTCTT GTCGTGGGCTCGGCTGCTTTCAGGACTACGACATCGTGCTGCCGCTCATG GCGGCGGCTGGTGTCTCCTCCCTAGTGGTGGAGCTCTTCAGCCGCGCCGA TGCCCCTGCCGTGCAGCCCATGCCTAGAGATATGAGCCTCGAGATCGGGC TCAAAATCTCCGGGAAGGTGGACAAGCTCATGGGAAAGATCCAGGTGGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17372:219..3568+

>mRNA_Ecto-sp13_S_contig17372.5189.1 ID=mRNA_Ecto-sp13_S_contig17372.5189.1|Name=mRNA_Ecto-sp13_S_contig17372.5189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17372:219..3568+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCGCTGACGTGTTTAAGGGAAATTTCCCGGGTTTTGGGTGGATGAAGAA
GGCCCCGCAGTGGTCGAAGCCGATCATGATGGCGGCCGTTACCGGAACGG
TCGGCGTGTTCTTCCCGCAGGTGTTATTCTTCGGGTACGACACTCTCGAC
AAGCTCCTCGCTAATACCGGGTCTTACAGCTTGCCTCTGCTTTGCTTTTT
GTGCGTGGCGAAGGCTCTGCTGACGGCAGGTGCCTTAGGCTCGGGCCTCG
TCGGCGGAACTTTCGCCCCTTCGCTGTTCCTAGGGGCGACGGCGGGCGCG
GCTTACCAGCGGATACTCCAGGGCTGTTTGACGGCGTTCCGATCCACCGC
TGGGCCATCCCTGGCTGCCGCGAGCACCTTCCTGCTGCCGGTGACATCGG
TCCTCGGCCTAGGGGGCCCCGGTGGTGACCTGAGCTCACTGCTGACTATC
GCGGGGTCGCCGGCTTACGCCATGGTCGGTGCGGCTGCAGTGCTCTCGGC
GCTGTACCGCGCGCCGCTGACGGGGTCGCTTCTCCTGTTTGAGCTGACGA
AGGACTACGACATCGTGCTGCCGCTCATGGCGGCGGCTGGTGTCTCCTCC
CTAGTGGTGGAGCTCTTCAGCCGCGCCGATGCCCCTGCCGTGCAGCCCAT
GCCTAGAGATATGAGCCTCGAGATCGGGCTCAAAATCTCCGGGAAGGTGG
ACAAGCTCATGGGAAAGATCCAGGTGGGT
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